BLASTX nr result

ID: Coptis21_contig00008635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008635
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310677.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
emb|CAN66040.1| hypothetical protein VITISV_035756 [Vitis vinifera]   128   4e-28
emb|CBI20023.3| unnamed protein product [Vitis vinifera]              128   5e-28
emb|CBI39026.3| unnamed protein product [Vitis vinifera]              127   7e-28
ref|XP_002267672.2| PREDICTED: probable LRR receptor-like serine...   127   9e-28

>ref|XP_002310677.1| predicted protein [Populus trichocarpa] gi|222853580|gb|EEE91127.1|
           predicted protein [Populus trichocarpa]
          Length = 1036

 Score =  129 bits (323), Expect = 3e-28
 Identities = 66/139 (47%), Positives = 86/139 (61%), Gaps = 2/139 (1%)
 Frame = -3

Query: 415 YLQGSLQIKDFNIRSVAGGAINRAVQRNFKVQVSENFLEIHLFWAGKGTCCIPAESYYGP 236
           Y+QGS  +KDF+I+  AGG +N+AVQR FKVQV+EN+L+IH FWAGKGTCCIPA+  YGP
Sbjct: 547 YIQGSRVLKDFDIQKAAGGIMNQAVQREFKVQVTENYLDIHFFWAGKGTCCIPAQGTYGP 606

Query: 235 SISAVRVTPDFQPTVSDR-PPTGSKKNRTSMXXXXXXXXXXXXXICALSILYL-RRKXXX 62
           S+SA+   PDF PTVS++ P    KKNRT +             +   ++ ++ RRK   
Sbjct: 607 SVSAINAIPDFTPTVSNKLPSEKKKKNRTGLIAGIVVGVGIVGFLLVFAVFFVRRRKGQS 666

Query: 61  XXXXXXXXXXXXRPNTFSY 5
                       RP TFSY
Sbjct: 667 NNDFEEFLGIDARPYTFSY 685


>emb|CAN66040.1| hypothetical protein VITISV_035756 [Vitis vinifera]
          Length = 612

 Score =  128 bits (322), Expect = 4e-28
 Identities = 68/139 (48%), Positives = 84/139 (60%), Gaps = 1/139 (0%)
 Frame = -3

Query: 415 YLQGSLQIKDFNIRSVAGGAINRAVQRNFKVQVSENFLEIHLFWAGKGTCCIPAESYYGP 236
           Y+QG+LQ KDF+I   AGG + RA+++ F   VSEN+LEIHLFWAGKGTCC P + YYGP
Sbjct: 128 YIQGALQFKDFDISKEAGG-VERALEKKFNATVSENYLEIHLFWAGKGTCCNPIQGYYGP 186

Query: 235 SISAVRVTPDFQPTVSDRPP-TGSKKNRTSMXXXXXXXXXXXXXICALSILYLRRKXXXX 59
           SISA+ V  DF PTV+  PP   SKKN T +             I   S+LY++RK    
Sbjct: 187 SISALSVVSDFTPTVAGNPPIPPSKKNNTGLIVGVAVSVGVVSMILICSVLYIKRKASYV 246

Query: 58  XXXXXXXXXXXRPNTFSYT 2
                      RPNTFSY+
Sbjct: 247 NEDEEFLGIGPRPNTFSYS 265


>emb|CBI20023.3| unnamed protein product [Vitis vinifera]
          Length = 349

 Score =  128 bits (321), Expect = 5e-28
 Identities = 67/139 (48%), Positives = 85/139 (61%), Gaps = 2/139 (1%)
 Frame = -3

Query: 415 YLQGSLQIKDFNIRSVAGGAINRAVQRNFKVQVSENFLEIHLFWAGKGTCCIPAESYYGP 236
           Y+QG+L +KDF+IR  AG    RAV++ FK QVSEN++EIHLFWAGKGTCC+PA+  YGP
Sbjct: 184 YIQGNLVLKDFDIRKEAGEVSFRAVKKEFKAQVSENYIEIHLFWAGKGTCCVPAQGTYGP 243

Query: 235 SISAVRVTPDFQPTVSDRPPTGSKKNRTSMXXXXXXXXXXXXXICALSILY--LRRKXXX 62
           SISA+  TPDF+PT+ +  P G KKNRT +             +   ++ Y  LRRK   
Sbjct: 244 SISAISATPDFEPTLPNTAPNG-KKNRTGLMVGLAVGVGLVCILSVFTVYYFVLRRKKLY 302

Query: 61  XXXXXXXXXXXXRPNTFSY 5
                       RP TFSY
Sbjct: 303 ESQDEVLLGMDARPYTFSY 321


>emb|CBI39026.3| unnamed protein product [Vitis vinifera]
          Length = 1037

 Score =  127 bits (320), Expect = 7e-28
 Identities = 68/139 (48%), Positives = 84/139 (60%), Gaps = 1/139 (0%)
 Frame = -3

Query: 415 YLQGSLQIKDFNIRSVAGGAINRAVQRNFKVQVSENFLEIHLFWAGKGTCCIPAESYYGP 236
           Y+QG+LQ KDF+I   AGG + RA+++ F   VSEN+LEIHLFWAGKGTCC P + YYGP
Sbjct: 553 YIQGALQFKDFDISKEAGG-VERALEKKFYATVSENYLEIHLFWAGKGTCCNPIQGYYGP 611

Query: 235 SISAVRVTPDFQPTVSDRPP-TGSKKNRTSMXXXXXXXXXXXXXICALSILYLRRKXXXX 59
           SISA+ V  DF PTV+  PP   SKKN T +             I   S+LY++RK    
Sbjct: 612 SISALSVVSDFTPTVAGNPPIPPSKKNNTGLIVGVAVSVGVVSMILICSVLYIKRKASYV 671

Query: 58  XXXXXXXXXXXRPNTFSYT 2
                      RPNTFSY+
Sbjct: 672 NEDEEFLGIGPRPNTFSYS 690


>ref|XP_002267672.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Vitis vinifera]
          Length = 1028

 Score =  127 bits (319), Expect = 9e-28
 Identities = 67/139 (48%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
 Frame = -3

Query: 415 YLQGSLQIKDFNIRSVAGGAINRAVQRNFKVQVSENFLEIHLFWAGKGTCCIPAESYYGP 236
           Y+QG L +KDF+IR  AGG   +AV++ F  QV EN++EIHLFWAGKGTCC+PA+  YGP
Sbjct: 547 YIQGDLVLKDFDIRKEAGGVSFQAVKKEFTAQVLENYIEIHLFWAGKGTCCVPAQGTYGP 606

Query: 235 SISAVRVTPDFQPTVSDRPPTGSKKNRTSMXXXXXXXXXXXXXICALSILY--LRRKXXX 62
           SISA+  TPDF+PTVS+  P G KKNRT +             +   ++ Y  LRRK   
Sbjct: 607 SISAISATPDFEPTVSNTAPNG-KKNRTGLIVGIAVGLGVVCFLSVFALYYFVLRRKKPS 665

Query: 61  XXXXXXXXXXXXRPNTFSY 5
                       RP TFSY
Sbjct: 666 ENQDEELLGMDARPYTFSY 684


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