BLASTX nr result

ID: Coptis21_contig00008630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008630
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB55293.1| hypothetical protein 10.t00044 [Asparagus officin...    99   4e-19
gb|ABD63122.1| hypothetical protein 18.t00018 [Asparagus officin...    76   2e-12

>gb|ABB55293.1| hypothetical protein 10.t00044 [Asparagus officinalis]
          Length = 176

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 42/66 (63%), Positives = 56/66 (84%)
 Frame = +1

Query: 1   RNLKINFKVDIPIYDGTVDANKLDNWIDRLEAYYTIYKYSNSDKIKFTTLKFSSHALTWW 180
           +NLKI+FKV+I IYDG+VD  +LD+WI+R+E Y+T+Y YS+ +KI FTTLK S HALTWW
Sbjct: 105 QNLKIDFKVEILIYDGSVDVERLDDWIERMETYFTLYGYSSKEKIVFTTLKLSGHALTWW 164

Query: 181 KSFRKR 198
           KS+ K+
Sbjct: 165 KSYCKQ 170


>gb|ABD63122.1| hypothetical protein 18.t00018 [Asparagus officinalis]
          Length = 189

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 31/58 (53%), Positives = 45/58 (77%)
 Frame = +1

Query: 1   RNLKINFKVDIPIYDGTVDANKLDNWIDRLEAYYTIYKYSNSDKIKFTTLKFSSHALT 174
           +NLKI FKV+I +YDG+V+  + D+WI+R+E Y+ +Y YS+ +K+ F TLK S HALT
Sbjct: 131 QNLKIGFKVEISVYDGSVNVERFDDWIERMETYFILYGYSSKEKLVFVTLKLSGHALT 188


Top