BLASTX nr result
ID: Coptis21_contig00008621
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00008621 (536 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADR71308.1| hypothetical protein 30 [Hevea brasiliensis] 115 3e-24 ref|XP_002285433.1| PREDICTED: uncharacterized protein LOC100267... 115 5e-24 ref|XP_002320677.1| predicted protein [Populus trichocarpa] gi|1... 114 7e-24 ref|XP_002302395.1| predicted protein [Populus trichocarpa] gi|1... 114 1e-23 ref|XP_003525954.1| PREDICTED: uncharacterized protein LOC100811... 103 2e-20 >gb|ADR71308.1| hypothetical protein 30 [Hevea brasiliensis] Length = 113 Score = 115 bits (289), Expect = 3e-24 Identities = 58/86 (67%), Positives = 59/86 (68%) Frame = +3 Query: 96 MATITSSSNCTTFFNLXXXXXXXXXXXXXXHGSPGCGKLDGVAMWFINGVTSAFFASLER 275 MA TS+S C FFN HGSPGCGKLDGVAMWFINGV SAFFASLER Sbjct: 1 MAAATSTS-CAGFFNFRSNSDEGRVRPSSTHGSPGCGKLDGVAMWFINGVASAFFASLER 59 Query: 276 CSCINIATYDDSDEGNDLPLISNDGN 353 CSCI IAT DD DE ND PLI NDGN Sbjct: 60 CSCIRIATEDDGDEANDAPLIMNDGN 85 >ref|XP_002285433.1| PREDICTED: uncharacterized protein LOC100267736 [Vitis vinifera] gi|302142168|emb|CBI19371.3| unnamed protein product [Vitis vinifera] Length = 111 Score = 115 bits (287), Expect = 5e-24 Identities = 54/82 (65%), Positives = 59/82 (71%) Frame = +3 Query: 108 TSSSNCTTFFNLXXXXXXXXXXXXXXHGSPGCGKLDGVAMWFINGVTSAFFASLERCSCI 287 T+S+ CT+ FNL H SPGCGKLDGVAMWFINGV +AFFASLERCSCI Sbjct: 4 TTSTTCTSLFNLRPASDEPRARTSSTHASPGCGKLDGVAMWFINGVAAAFFASLERCSCI 63 Query: 288 NIATYDDSDEGNDLPLISNDGN 353 IAT DD D+ NDLPLI NDGN Sbjct: 64 RIATEDDCDDANDLPLIFNDGN 85 >ref|XP_002320677.1| predicted protein [Populus trichocarpa] gi|118484452|gb|ABK94102.1| unknown [Populus trichocarpa] gi|222861450|gb|EEE98992.1| predicted protein [Populus trichocarpa] Length = 113 Score = 114 bits (286), Expect = 7e-24 Identities = 56/83 (67%), Positives = 61/83 (73%), Gaps = 1/83 (1%) Frame = +3 Query: 108 TSSSNCTTFFNLXXXXXXXXXXXXXXHGS-PGCGKLDGVAMWFINGVTSAFFASLERCSC 284 T+S+NC++FF+L HGS PGCGKLDGVAMWFINGV SAFFASLERCSC Sbjct: 4 TTSTNCSSFFSLRSNSVEPRVRTTSSHGSSPGCGKLDGVAMWFINGVASAFFASLERCSC 63 Query: 285 INIATYDDSDEGNDLPLISNDGN 353 I IAT DD DE ND PLI NDGN Sbjct: 64 IRIATEDDGDEANDAPLILNDGN 86 >ref|XP_002302395.1| predicted protein [Populus trichocarpa] gi|118485563|gb|ABK94633.1| unknown [Populus trichocarpa] gi|222844121|gb|EEE81668.1| predicted protein [Populus trichocarpa] Length = 114 Score = 114 bits (284), Expect = 1e-23 Identities = 56/87 (64%), Positives = 61/87 (70%), Gaps = 1/87 (1%) Frame = +3 Query: 96 MATITSSSNCTTFFNLXXXXXXXXXXXXXXHGS-PGCGKLDGVAMWFINGVTSAFFASLE 272 MA TSS+NC++FFN HGS PGCGKLDGVAMWFINGV AFFAS+E Sbjct: 1 MAATTSSTNCSSFFNPRSNSVEPRVRTSTSHGSSPGCGKLDGVAMWFINGVAGAFFASME 60 Query: 273 RCSCINIATYDDSDEGNDLPLISNDGN 353 RCSCI IAT DD DE ND PLI +DGN Sbjct: 61 RCSCIRIATEDDGDEANDAPLILHDGN 87 >ref|XP_003525954.1| PREDICTED: uncharacterized protein LOC100811492 [Glycine max] Length = 118 Score = 103 bits (256), Expect = 2e-20 Identities = 52/87 (59%), Positives = 59/87 (67%), Gaps = 1/87 (1%) Frame = +3 Query: 96 MATITSSSNCTTFFNLXXXXXXXXXXXXXXHGSPG-CGKLDGVAMWFINGVTSAFFASLE 272 MA TSSS+ + FF+L HGS CGK DGVAMWFINGVT+AFFASL Sbjct: 1 MAVTTSSSSTSGFFSLRSPNSVDSSRVSSTHGSSSACGKFDGVAMWFINGVTTAFFASLN 60 Query: 273 RCSCINIATYDDSDEGNDLPLISNDGN 353 RCSCI IAT +D D+ NDLPL+ NDGN Sbjct: 61 RCSCIRIATEEDGDDANDLPLMLNDGN 87