BLASTX nr result

ID: Coptis21_contig00008621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008621
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADR71308.1| hypothetical protein 30 [Hevea brasiliensis]           115   3e-24
ref|XP_002285433.1| PREDICTED: uncharacterized protein LOC100267...   115   5e-24
ref|XP_002320677.1| predicted protein [Populus trichocarpa] gi|1...   114   7e-24
ref|XP_002302395.1| predicted protein [Populus trichocarpa] gi|1...   114   1e-23
ref|XP_003525954.1| PREDICTED: uncharacterized protein LOC100811...   103   2e-20

>gb|ADR71308.1| hypothetical protein 30 [Hevea brasiliensis]
          Length = 113

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/86 (67%), Positives = 59/86 (68%)
 Frame = +3

Query: 96  MATITSSSNCTTFFNLXXXXXXXXXXXXXXHGSPGCGKLDGVAMWFINGVTSAFFASLER 275
           MA  TS+S C  FFN               HGSPGCGKLDGVAMWFINGV SAFFASLER
Sbjct: 1   MAAATSTS-CAGFFNFRSNSDEGRVRPSSTHGSPGCGKLDGVAMWFINGVASAFFASLER 59

Query: 276 CSCINIATYDDSDEGNDLPLISNDGN 353
           CSCI IAT DD DE ND PLI NDGN
Sbjct: 60  CSCIRIATEDDGDEANDAPLIMNDGN 85


>ref|XP_002285433.1| PREDICTED: uncharacterized protein LOC100267736 [Vitis vinifera]
           gi|302142168|emb|CBI19371.3| unnamed protein product
           [Vitis vinifera]
          Length = 111

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/82 (65%), Positives = 59/82 (71%)
 Frame = +3

Query: 108 TSSSNCTTFFNLXXXXXXXXXXXXXXHGSPGCGKLDGVAMWFINGVTSAFFASLERCSCI 287
           T+S+ CT+ FNL              H SPGCGKLDGVAMWFINGV +AFFASLERCSCI
Sbjct: 4   TTSTTCTSLFNLRPASDEPRARTSSTHASPGCGKLDGVAMWFINGVAAAFFASLERCSCI 63

Query: 288 NIATYDDSDEGNDLPLISNDGN 353
            IAT DD D+ NDLPLI NDGN
Sbjct: 64  RIATEDDCDDANDLPLIFNDGN 85


>ref|XP_002320677.1| predicted protein [Populus trichocarpa] gi|118484452|gb|ABK94102.1|
           unknown [Populus trichocarpa]
           gi|222861450|gb|EEE98992.1| predicted protein [Populus
           trichocarpa]
          Length = 113

 Score =  114 bits (286), Expect = 7e-24
 Identities = 56/83 (67%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
 Frame = +3

Query: 108 TSSSNCTTFFNLXXXXXXXXXXXXXXHGS-PGCGKLDGVAMWFINGVTSAFFASLERCSC 284
           T+S+NC++FF+L              HGS PGCGKLDGVAMWFINGV SAFFASLERCSC
Sbjct: 4   TTSTNCSSFFSLRSNSVEPRVRTTSSHGSSPGCGKLDGVAMWFINGVASAFFASLERCSC 63

Query: 285 INIATYDDSDEGNDLPLISNDGN 353
           I IAT DD DE ND PLI NDGN
Sbjct: 64  IRIATEDDGDEANDAPLILNDGN 86


>ref|XP_002302395.1| predicted protein [Populus trichocarpa] gi|118485563|gb|ABK94633.1|
           unknown [Populus trichocarpa]
           gi|222844121|gb|EEE81668.1| predicted protein [Populus
           trichocarpa]
          Length = 114

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/87 (64%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
 Frame = +3

Query: 96  MATITSSSNCTTFFNLXXXXXXXXXXXXXXHGS-PGCGKLDGVAMWFINGVTSAFFASLE 272
           MA  TSS+NC++FFN               HGS PGCGKLDGVAMWFINGV  AFFAS+E
Sbjct: 1   MAATTSSTNCSSFFNPRSNSVEPRVRTSTSHGSSPGCGKLDGVAMWFINGVAGAFFASME 60

Query: 273 RCSCINIATYDDSDEGNDLPLISNDGN 353
           RCSCI IAT DD DE ND PLI +DGN
Sbjct: 61  RCSCIRIATEDDGDEANDAPLILHDGN 87


>ref|XP_003525954.1| PREDICTED: uncharacterized protein LOC100811492 [Glycine max]
          Length = 118

 Score =  103 bits (256), Expect = 2e-20
 Identities = 52/87 (59%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
 Frame = +3

Query: 96  MATITSSSNCTTFFNLXXXXXXXXXXXXXXHGSPG-CGKLDGVAMWFINGVTSAFFASLE 272
           MA  TSSS+ + FF+L              HGS   CGK DGVAMWFINGVT+AFFASL 
Sbjct: 1   MAVTTSSSSTSGFFSLRSPNSVDSSRVSSTHGSSSACGKFDGVAMWFINGVTTAFFASLN 60

Query: 273 RCSCINIATYDDSDEGNDLPLISNDGN 353
           RCSCI IAT +D D+ NDLPL+ NDGN
Sbjct: 61  RCSCIRIATEEDGDDANDLPLMLNDGN 87


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