BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008591
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275126.1| PREDICTED: RNA polymerase II transcriptional...   109   4e-22
ref|XP_004146395.1| PREDICTED: RNA polymerase II transcriptional...   103   2e-20
gb|AFK40203.1| unknown [Lotus japonicus]                              100   2e-19
ref|NP_196487.1| RNA polymerase II transcriptional coactivator K...   100   3e-19
dbj|BAJ87408.1| predicted protein [Hordeum vulgare subsp. vulgare]    100   3e-19

>ref|XP_002275126.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI
           [Vitis vinifera] gi|147846591|emb|CAN79502.1|
           hypothetical protein VITISV_022689 [Vitis vinifera]
           gi|296082597|emb|CBI21602.3| unnamed protein product
           [Vitis vinifera]
          Length = 103

 Score =  109 bits (273), Expect = 4e-22
 Identities = 49/66 (74%), Positives = 58/66 (87%)
 Frame = -3

Query: 470 IIACEISKTRRVTVRSWQGKPVIDIREFYVKDGNTLPGKKGISLSMDQWQILRDHMDAID 291
           II CEIS+ RRV+VR+WQGK  +DIREFYVKDG  +PGKKGISL+MDQW +LRDH++ ID
Sbjct: 37  IIVCEISRNRRVSVRNWQGKVQVDIREFYVKDGKQMPGKKGISLTMDQWNVLRDHVNEID 96

Query: 290 EAVADN 273
           EAVADN
Sbjct: 97  EAVADN 102


>ref|XP_004146395.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI-like
           [Cucumis sativus] gi|449527765|ref|XP_004170880.1|
           PREDICTED: RNA polymerase II transcriptional coactivator
           KIWI-like [Cucumis sativus]
          Length = 104

 Score =  103 bits (258), Expect = 2e-20
 Identities = 54/110 (49%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
 Frame = -3

Query: 587 MSWRGKRK--DTNYSKEEKNPKRNFXXXXXXXXXXXXXXXDIIACEISKTRRVTVRSWQG 414
           MS  GKRK  + + S+ +  P + F                I+ CE+SK RRV VR+WQG
Sbjct: 1   MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDE-------IVVCELSKNRRVMVRNWQG 53

Query: 413 KPVIDIREFYVKDGNTLPGKKGISLSMDQWQILRDHMDAIDEAVADNT*G 264
           K V+DIREFYVKDG  +PGKKGISLS+DQW +L +H++ ID+AV +N+ G
Sbjct: 54  KIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSSG 103


>gb|AFK40203.1| unknown [Lotus japonicus]
          Length = 106

 Score =  100 bits (250), Expect = 2e-19
 Identities = 48/105 (45%), Positives = 68/105 (64%)
 Frame = -3

Query: 587 MSWRGKRKDTNYSKEEKNPKRNFXXXXXXXXXXXXXXXDIIACEISKTRRVTVRSWQGKP 408
           MS +GK++D      + +   +                 I+ CEISK RRV+VR+WQG+ 
Sbjct: 1   MSGKGKKRDDLDRASDADSDSHAPPKKSLKKDSDEDPDSIVVCEISKNRRVSVRNWQGRI 60

Query: 407 VIDIREFYVKDGNTLPGKKGISLSMDQWQILRDHMDAIDEAVADN 273
           V+DI EFYVKDG  +PGKKGISL+MDQW +LR+H++ ID+AV ++
Sbjct: 61  VVDILEFYVKDGKQMPGKKGISLTMDQWNVLRNHIEEIDKAVNES 105


>ref|NP_196487.1| RNA polymerase II transcriptional coactivator KIWI [Arabidopsis
           thaliana] gi|37079587|sp|O65154.1|KIWI_ARATH RecName:
           Full=RNA polymerase II transcriptional coactivator KIWI
           gi|2997684|gb|AAC08574.1| putative transcriptional
           co-activator [Arabidopsis thaliana]
           gi|9955512|emb|CAC05451.1| putative transcriptional
           co-activator (KIWI) [Arabidopsis thaliana]
           gi|28466805|gb|AAO44011.1| At5g09250 [Arabidopsis
           thaliana] gi|110736129|dbj|BAF00036.1| putative
           transcriptional co-activator [Arabidopsis thaliana]
           gi|225898901|dbj|BAH30581.1| hypothetical protein
           [Arabidopsis thaliana] gi|332003981|gb|AED91364.1| RNA
           polymerase II transcriptional coactivator KIWI
           [Arabidopsis thaliana]
          Length = 107

 Score =  100 bits (248), Expect = 3e-19
 Identities = 53/105 (50%), Positives = 69/105 (65%), Gaps = 1/105 (0%)
 Frame = -3

Query: 587 MSWRGKRKDTNY-SKEEKNPKRNFXXXXXXXXXXXXXXXDIIACEISKTRRVTVRSWQGK 411
           MS RGKRKD +  + ++++                    DI+ C ISK RRV+VR+W GK
Sbjct: 1   MSSRGKRKDEDVRASDDESETHAPAKKVAKPADDSDQSDDIVVCNISKNRRVSVRNWNGK 60

Query: 410 PVIDIREFYVKDGNTLPGKKGISLSMDQWQILRDHMDAIDEAVAD 276
             IDIREFYVKDG TLPGKKGISLS+DQW  LR+H + I++A++D
Sbjct: 61  IWIDIREFYVKDGKTLPGKKGISLSVDQWNTLRNHAEDIEKALSD 105


>dbj|BAJ87408.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 106

 Score =  100 bits (248), Expect = 3e-19
 Identities = 45/67 (67%), Positives = 57/67 (85%)
 Frame = -3

Query: 470 IIACEISKTRRVTVRSWQGKPVIDIREFYVKDGNTLPGKKGISLSMDQWQILRDHMDAID 291
           I+  +ISK +RV VRSW GK ++D+REFYVKDG +LP +KGISLSMDQW+ILRD++ AID
Sbjct: 40  IVVAQISKNKRVAVRSWNGKVMVDMREFYVKDGKSLPTRKGISLSMDQWEILRDNIKAID 99

Query: 290 EAVADNT 270
           EAV +NT
Sbjct: 100 EAVKENT 106