BLASTX nr result

ID: Coptis21_contig00008580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008580
         (843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328470.1| predicted protein [Populus trichocarpa] gi|2...    85   2e-14
ref|XP_002442945.1| hypothetical protein SORBIDRAFT_08g005220 [S...    76   8e-12
ref|XP_002517263.1| conserved hypothetical protein [Ricinus comm...    70   5e-10
ref|XP_002309897.1| predicted protein [Populus trichocarpa] gi|2...    70   8e-10
ref|XP_002280908.1| PREDICTED: uncharacterized protein LOC100266...    69   1e-09

>ref|XP_002328470.1| predicted protein [Populus trichocarpa] gi|222838185|gb|EEE76550.1|
           predicted protein [Populus trichocarpa]
          Length = 95

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 51/96 (53%), Positives = 63/96 (65%)
 Frame = +2

Query: 125 NTAGVPIQRMSSIESEPRTLSYDQIQYAREAALDVVNNKSSEEALSIFTEGMEQVITSVG 304
           + A V IQR SS+ESEPRTL+ DQIQ+AREAAL VVN +S EEALSIFTEG+E V    G
Sbjct: 4   DAAMVRIQRKSSMESEPRTLTMDQIQFAREAALYVVNTRSIEEALSIFTEGLEPVGGRNG 63

Query: 305 NEKRDVITEQDGDVECRICRIRPGFMDSRDVASAPF 412
           +  +D+  E     E      +    + RD+ASAPF
Sbjct: 64  DRMKDMSREMQSVDELE----QRQLTEIRDIASAPF 95


>ref|XP_002442945.1| hypothetical protein SORBIDRAFT_08g005220 [Sorghum bicolor]
           gi|241943638|gb|EES16783.1| hypothetical protein
           SORBIDRAFT_08g005220 [Sorghum bicolor]
          Length = 136

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 25/128 (19%)
 Frame = +2

Query: 104 TQNKNMKNTAGVPIQRMSSIESEPRTLSYDQIQYAREAALDVVNNKSSEEALSIFTEGME 283
           T   + +     P  RMSSIE EP+TL+ DQI++AREAAL VV+ K+ EEA+ IFTEG++
Sbjct: 9   TATTSSRQVEEAPAGRMSSIEWEPKTLTLDQIKFAREAALYVVSTKTEEEAIRIFTEGLK 68

Query: 284 --QVITSVGNEKRDVITEQDGDVECRIC-----------------------RIRPGFMDS 388
             Q+ T+   +   + +  D DVE   C                       R R    D 
Sbjct: 69  PVQMTTATVRKSSSIDSSSDDDVELGCCCCCSSAGSNKGCCGGGSKGGRRGRRRRSMDDD 128

Query: 389 RDVASAPF 412
           RDVA+APF
Sbjct: 129 RDVATAPF 136


>ref|XP_002517263.1| conserved hypothetical protein [Ricinus communis]
           gi|223543634|gb|EEF45163.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 97

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 46/96 (47%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
 Frame = +2

Query: 134 GVPIQRMSSIESEPRTLSYDQIQYAREAALDVVNNKSSEEALSIFTEGMEQVITSVGNEK 313
           GV + R SSIESEPRTL+  Q Q AR+AAL VVN +S EEA +IFT+G+E V++    + 
Sbjct: 8   GVRLDRKSSIESEPRTLTNSQFQGARDAALYVVNTRSIEEAENIFTQGLEPVVSVA--QG 65

Query: 314 RDVITEQDGDVECRICRIRPGFM---DSRDVASAPF 412
           R    + +G+  C    IRP        RDV SAPF
Sbjct: 66  RGSSMDLEGEFIC----IRPPLQLPDGIRDVVSAPF 97


>ref|XP_002309897.1| predicted protein [Populus trichocarpa] gi|222852800|gb|EEE90347.1|
           predicted protein [Populus trichocarpa]
          Length = 107

 Score = 69.7 bits (169), Expect = 8e-10
 Identities = 48/109 (44%), Positives = 60/109 (55%), Gaps = 14/109 (12%)
 Frame = +2

Query: 128 TAGVPIQRMSSIESEPRTLSYDQIQYAREAALDVVNNKSSEEALSIFTEGMEQVITSVGN 307
           T    I R +SIE EPRTL  +QIQ+AREAAL V+N  S E ALSIFTEG+E V+  V  
Sbjct: 7   TMAARIDRKTSIEFEPRTLRMEQIQFAREAALYVLNTSSIEAALSIFTEGVEPVV-GVAR 65

Query: 308 EKRDVIT--------------EQDGDVECRICRIRPGFMDSRDVASAPF 412
              D I               ++D D + ++    PG    RD+ASAPF
Sbjct: 66  RNGDAINGMEMSKEKQYLENEDEDEDEDLQL----PGI---RDIASAPF 107


>ref|XP_002280908.1| PREDICTED: uncharacterized protein LOC100266089 [Vitis vinifera]
          Length = 89

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 44/90 (48%), Positives = 60/90 (66%)
 Frame = +2

Query: 143 IQRMSSIESEPRTLSYDQIQYAREAALDVVNNKSSEEALSIFTEGMEQVITSVGNEKRDV 322
           ++R +SIE+EP TL+ +Q+Q+AREAAL V+N +S EEALSIFTEG+E V  SV     D 
Sbjct: 3   MERQTSIETEPMTLTINQLQFAREAALYVMNTRSMEEALSIFTEGLEPV-HSVLKRNGDS 61

Query: 323 ITEQDGDVECRICRIRPGFMDSRDVASAPF 412
           +    G+   R  +  P   +SRD+ SAPF
Sbjct: 62  MMNL-GEEFDREAKYLP-TSNSRDIVSAPF 89


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