BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008578
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522164.1| DNA gyrase subunit B, putative [Ricinus comm...   194   8e-48
sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chlor...   190   1e-46
ref|XP_003521129.1| PREDICTED: DNA gyrase subunit B, chloroplast...   189   2e-46
emb|CBI30132.3| unnamed protein product [Vitis vinifera]              188   5e-46
ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplast...   188   5e-46

>ref|XP_002522164.1| DNA gyrase subunit B, putative [Ricinus communis]
           gi|223538602|gb|EEF40205.1| DNA gyrase subunit B,
           putative [Ricinus communis]
          Length = 732

 Score =  194 bits (492), Expect = 8e-48
 Identities = 84/105 (80%), Positives = 101/105 (96%)
 Frame = +1

Query: 1   EFDHTTVAGRIRELAFLNPELTITLRKEDDDPEKTQHNEYYYAGGLLEYVKWLNSDKKPI 180
           EFD+ T+AGR+RELAFLNP+LTITL+KED+DPEK Q++EY+YAGGL+EYVKWLN+DKKP+
Sbjct: 272 EFDYNTIAGRVRELAFLNPKLTITLKKEDNDPEKNQYDEYFYAGGLIEYVKWLNTDKKPL 331

Query: 181 HDTVGFRKEVEGITIDLALQWCSDAYSDTVLGYANSIRTVDGGTH 315
           HD VGF KE++GITID+ALQWCSDAYSDT+LGYANSIRT+DGGTH
Sbjct: 332 HDVVGFGKEIDGITIDMALQWCSDAYSDTILGYANSIRTIDGGTH 376


>sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chloroplastic/mitochondrial;
           Flags: Precursor gi|38017095|gb|AAR07943.1| DNA gyrase B
           subunit [Nicotiana benthamiana]
          Length = 731

 Score =  190 bits (482), Expect = 1e-46
 Identities = 85/105 (80%), Positives = 98/105 (93%)
 Frame = +1

Query: 1   EFDHTTVAGRIRELAFLNPELTITLRKEDDDPEKTQHNEYYYAGGLLEYVKWLNSDKKPI 180
           +FD+ T+AGRIRELAFLNPELTI L+KED DPEK Q NEY+YAGGL+EYVKWLN+DKKP+
Sbjct: 271 QFDYNTIAGRIRELAFLNPELTIALKKEDIDPEKIQCNEYFYAGGLVEYVKWLNADKKPL 330

Query: 181 HDTVGFRKEVEGITIDLALQWCSDAYSDTVLGYANSIRTVDGGTH 315
           HD +GFRKE +GITID+ALQWCSDAYSDT+LGYANSIRT+DGGTH
Sbjct: 331 HDVLGFRKEADGITIDMALQWCSDAYSDTMLGYANSIRTIDGGTH 375


>ref|XP_003521129.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
           [Glycine max]
          Length = 726

 Score =  189 bits (481), Expect = 2e-46
 Identities = 82/105 (78%), Positives = 97/105 (92%)
 Frame = +1

Query: 1   EFDHTTVAGRIRELAFLNPELTITLRKEDDDPEKTQHNEYYYAGGLLEYVKWLNSDKKPI 180
           +FDH T+AGRIRELAFLNP+LTITLRKED+DPEK Q+NEY+YAGGL+EYVKWLN+DKK +
Sbjct: 266 QFDHNTIAGRIRELAFLNPKLTITLRKEDNDPEKVQYNEYFYAGGLVEYVKWLNTDKKAL 325

Query: 181 HDTVGFRKEVEGITIDLALQWCSDAYSDTVLGYANSIRTVDGGTH 315
           HD + FRKE +GIT+D+A QWC DAYSDT+LGYANSIRT+DGGTH
Sbjct: 326 HDVLSFRKETDGITVDIAFQWCEDAYSDTILGYANSIRTIDGGTH 370


>emb|CBI30132.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score =  188 bits (477), Expect = 5e-46
 Identities = 84/105 (80%), Positives = 97/105 (92%)
 Frame = +1

Query: 1   EFDHTTVAGRIRELAFLNPELTITLRKEDDDPEKTQHNEYYYAGGLLEYVKWLNSDKKPI 180
           +FD+ T+AGRIRELAFLNPEL ITLRKED DPEK Q+NEY YAGGL+EYV+WLN+DKKP+
Sbjct: 247 QFDYNTIAGRIRELAFLNPELAITLRKEDKDPEKNQYNEYCYAGGLVEYVRWLNTDKKPV 306

Query: 181 HDTVGFRKEVEGITIDLALQWCSDAYSDTVLGYANSIRTVDGGTH 315
           HD VGFRK  +GI+ID+ALQWCSDAYSDT+LGYANSIRT+DGGTH
Sbjct: 307 HDVVGFRKVADGISIDVALQWCSDAYSDTMLGYANSIRTIDGGTH 351


>ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
           [Vitis vinifera]
          Length = 719

 Score =  188 bits (477), Expect = 5e-46
 Identities = 84/105 (80%), Positives = 97/105 (92%)
 Frame = +1

Query: 1   EFDHTTVAGRIRELAFLNPELTITLRKEDDDPEKTQHNEYYYAGGLLEYVKWLNSDKKPI 180
           +FD+ T+AGRIRELAFLNPEL ITLRKED DPEK Q+NEY YAGGL+EYV+WLN+DKKP+
Sbjct: 259 QFDYNTIAGRIRELAFLNPELAITLRKEDKDPEKNQYNEYCYAGGLVEYVRWLNTDKKPV 318

Query: 181 HDTVGFRKEVEGITIDLALQWCSDAYSDTVLGYANSIRTVDGGTH 315
           HD VGFRK  +GI+ID+ALQWCSDAYSDT+LGYANSIRT+DGGTH
Sbjct: 319 HDVVGFRKVADGISIDVALQWCSDAYSDTMLGYANSIRTIDGGTH 363