BLASTX nr result

ID: Coptis21_contig00008574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008574
         (1633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263208.1| PREDICTED: TIM21-like protein, mitochondrial...   271   4e-70
ref|XP_004159453.1| PREDICTED: uncharacterized LOC101212713 [Cuc...   263   8e-68
ref|XP_004140920.1| PREDICTED: uncharacterized protein LOC101212...   263   1e-67
gb|ADE77049.1| unknown [Picea sitchensis]                             254   4e-65
ref|NP_001031562.1| uncharacterized protein [Arabidopsis thalian...   251   3e-64

>ref|XP_002263208.1| PREDICTED: TIM21-like protein, mitochondrial [Vitis vinifera]
            gi|296088479|emb|CBI37470.3| unnamed protein product
            [Vitis vinifera]
          Length = 314

 Score =  271 bits (693), Expect = 4e-70
 Identities = 143/252 (56%), Positives = 169/252 (67%)
 Frame = -2

Query: 1020 QVVTDSSRVSQATIGANFMTKDIPKANGTHIVVRGRHMKVSVLSLLTPNQLNKCYGGIPR 841
            QV+  S  + Q+ + AN + KD+   +GT ++      +  ++   +P +  + +G    
Sbjct: 65   QVLIKSRNLRQSAVNANCIIKDVRGVDGTSVLSARWQTRERIVGFCSPYRPIETHGKSTV 124

Query: 840  HPCXXXXXXXXXXXXXXXXXXXXXXXXDISTVDNPFDSLTDNIPEKPVTFTEGASYSXXX 661
             PC                         ISTV++PFD+ T NIPEKPVTF EGASYS   
Sbjct: 125  VPCFARSCASTASKSPEEKQSETRKD--ISTVEDPFDAPTYNIPEKPVTFAEGASYSVII 182

Query: 660  XXXXXXXXXXXXXVFKELIFQPKEYKVYGKALERVQDDGQVRARIGSPITGYGQESRNRA 481
                         VFKELIF+PKEYK++GKAL+RVQ+DGQVR RIGSPITGYGQESRNRA
Sbjct: 183  LVGLGIAAAAGYAVFKELIFEPKEYKIFGKALKRVQEDGQVRVRIGSPITGYGQESRNRA 242

Query: 480  ARQRIPNRKWTDEDGVERVEVNFYIRGPHGAGKVFTEMFKDKADKQWKFTYLIVEIKSPS 301
            ARQRI NR WTDEDGVE VEVNFYIRGPHGAGKV+TEMFKDK DKQWKFTYLI EIKSPS
Sbjct: 243  ARQRISNRIWTDEDGVEHVEVNFYIRGPHGAGKVYTEMFKDKVDKQWKFTYLIAEIKSPS 302

Query: 300  PAQLMLESYIPA 265
            PAQLMLESY+PA
Sbjct: 303  PAQLMLESYVPA 314


>ref|XP_004159453.1| PREDICTED: uncharacterized LOC101212713 [Cucumis sativus]
          Length = 323

 Score =  263 bits (673), Expect = 8e-68
 Identities = 141/233 (60%), Positives = 162/233 (69%), Gaps = 2/233 (0%)
 Frame = -2

Query: 957 DIPKA--NGTHIVVRGRHMKVSVLSLLTPNQLNKCYGGIPRHPCXXXXXXXXXXXXXXXX 784
           DIPKA   G  ++ R +  + SV++  T    ++C     R PC                
Sbjct: 94  DIPKAALGGMPVLSRWQDARASVVNFSTLGATSRCDTSA-RGPCFARFMSSKSSEKRGQT 152

Query: 783 XXXXXXXXDISTVDNPFDSLTDNIPEKPVTFTEGASYSXXXXXXXXXXXXXXXXVFKELI 604
                    ISTV++PFD+ T NIPEKPVTF EGASYS                VFKELI
Sbjct: 153 ESESKKE--ISTVEDPFDAPTYNIPEKPVTFAEGASYSFIILAGLGVAAAAGYAVFKELI 210

Query: 603 FQPKEYKVYGKALERVQDDGQVRARIGSPITGYGQESRNRAARQRIPNRKWTDEDGVERV 424
           FQPKEYK++ KAL+R+QDD QVR RIGSPITGYGQE+RNRAARQRIPNR WTDEDGVERV
Sbjct: 211 FQPKEYKIFDKALKRIQDDSQVRVRIGSPITGYGQETRNRAARQRIPNRVWTDEDGVERV 270

Query: 423 EVNFYIRGPHGAGKVFTEMFKDKADKQWKFTYLIVEIKSPSPAQLMLESYIPA 265
           EVNFYIRGPHGAGKV+TEMFKD+ DKQWKFTYLIVE+KSPSPAQL+LESY+PA
Sbjct: 271 EVNFYIRGPHGAGKVYTEMFKDQVDKQWKFTYLIVEVKSPSPAQLILESYMPA 323


>ref|XP_004140920.1| PREDICTED: uncharacterized protein LOC101212713 [Cucumis sativus]
          Length = 323

 Score =  263 bits (672), Expect = 1e-67
 Identities = 141/233 (60%), Positives = 162/233 (69%), Gaps = 2/233 (0%)
 Frame = -2

Query: 957 DIPKA--NGTHIVVRGRHMKVSVLSLLTPNQLNKCYGGIPRHPCXXXXXXXXXXXXXXXX 784
           DIPKA   G  ++ R +  + SV++  T    ++C     R PC                
Sbjct: 94  DIPKAALGGMPVLSRWQDARASVVNFSTLGVTSRCDTSA-RGPCFARFMSSKSSEKRGQT 152

Query: 783 XXXXXXXXDISTVDNPFDSLTDNIPEKPVTFTEGASYSXXXXXXXXXXXXXXXXVFKELI 604
                    ISTV++PFD+ T NIPEKPVTF EGASYS                VFKELI
Sbjct: 153 ESESKKE--ISTVEDPFDAPTYNIPEKPVTFAEGASYSFIILAGLGVAAAAGYAVFKELI 210

Query: 603 FQPKEYKVYGKALERVQDDGQVRARIGSPITGYGQESRNRAARQRIPNRKWTDEDGVERV 424
           FQPKEYK++ KAL+R+QDD QVR RIGSPITGYGQE+RNRAARQRIPNR WTDEDGVERV
Sbjct: 211 FQPKEYKIFDKALKRIQDDSQVRVRIGSPITGYGQETRNRAARQRIPNRVWTDEDGVERV 270

Query: 423 EVNFYIRGPHGAGKVFTEMFKDKADKQWKFTYLIVEIKSPSPAQLMLESYIPA 265
           EVNFYIRGPHGAGKV+TEMFKD+ DKQWKFTYLIVE+KSPSPAQL+LESY+PA
Sbjct: 271 EVNFYIRGPHGAGKVYTEMFKDQVDKQWKFTYLIVEVKSPSPAQLILESYMPA 323


>gb|ADE77049.1| unknown [Picea sitchensis]
          Length = 252

 Score =  254 bits (650), Expect = 4e-65
 Identities = 130/203 (64%), Positives = 145/203 (71%)
 Frame = -2

Query: 876 NQLNKCYGGIPRHPCXXXXXXXXXXXXXXXXXXXXXXXXDISTVDNPFDSLTDNIPEKPV 697
           NQ++K YG     PC                        DI+T ++PFD LTD IP KPV
Sbjct: 49  NQVSKLYGMHWMIPCSARSLASSSTTQAHQQTQQQRHNKDITTQEDPFDPLTDQIPVKPV 108

Query: 696 TFTEGASYSXXXXXXXXXXXXXXXXVFKELIFQPKEYKVYGKALERVQDDGQVRARIGSP 517
           TF EGASYS                VFKELIF+PKEYK++GKALERVQ D QV+ RIGSP
Sbjct: 109 TFVEGASYSVVIFVGLAIAGAAAYAVFKELIFEPKEYKIFGKALERVQQDSQVKVRIGSP 168

Query: 516 ITGYGQESRNRAARQRIPNRKWTDEDGVERVEVNFYIRGPHGAGKVFTEMFKDKADKQWK 337
           ITGYGQESRNRAARQRIPNR WTDEDGVERVEVNFYIRGPHGAGKV++EMFKDK DK+WK
Sbjct: 169 ITGYGQESRNRAARQRIPNRTWTDEDGVERVEVNFYIRGPHGAGKVYSEMFKDKTDKKWK 228

Query: 336 FTYLIVEIKSPSPAQLMLESYIP 268
           FTYLIV++ SPS AQLMLESY+P
Sbjct: 229 FTYLIVDVTSPSKAQLMLESYVP 251


>ref|NP_001031562.1| uncharacterized protein [Arabidopsis thaliana]
           gi|449061898|sp|Q1G3L1.1|TIM21_ARATH RecName:
           Full=Probable mitochondrial import inner membrane
           translocase subunit TIM21; AltName: Full=Protein
           SEGREGATION DISTORTION 3; Flags: Precursor
           gi|98961813|gb|ABF59236.1| unknown protein [Arabidopsis
           thaliana] gi|110737180|dbj|BAF00539.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332656415|gb|AEE81815.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 269

 Score =  251 bits (642), Expect = 3e-64
 Identities = 135/243 (55%), Positives = 164/243 (67%)
 Frame = -2

Query: 993 SQATIGANFMTKDIPKANGTHIVVRGRHMKVSVLSLLTPNQLNKCYGGIPRHPCXXXXXX 814
           S+     +F++KD   ANG  ++ R R+ + S+ +   P  +N  Y              
Sbjct: 39  SKRVFSNSFLSKDSTGANG--LLFRFRNPQASICTEARPKNINSSY----------FTRS 86

Query: 813 XXXXXXXXXXXXXXXXXXDISTVDNPFDSLTDNIPEKPVTFTEGASYSXXXXXXXXXXXX 634
                             +++TV++PFDS T +IPEKPVTFTEGASYS            
Sbjct: 87  FASRTSKEPGNQQNKAKKEVTTVEDPFDSPTYHIPEKPVTFTEGASYSLVILAGLGVAGA 146

Query: 633 XXXXVFKELIFQPKEYKVYGKALERVQDDGQVRARIGSPITGYGQESRNRAARQRIPNRK 454
               VFKELIFQPKEYKV+ KAL+R+QDDGQVR RIGSPI GYGQE+RNRAARQRIPNR 
Sbjct: 147 AGYGVFKELIFQPKEYKVFDKALKRIQDDGQVRVRIGSPIKGYGQETRNRAARQRIPNRV 206

Query: 453 WTDEDGVERVEVNFYIRGPHGAGKVFTEMFKDKADKQWKFTYLIVEIKSPSPAQLMLESY 274
           +TDEDGVE VEVNFYIRGP GAGKV+TEMFKDKA+K+WK+TYLIVEI +PSPA+LMLESY
Sbjct: 207 FTDEDGVEHVEVNFYIRGPQGAGKVYTEMFKDKAEKEWKYTYLIVEILTPSPAKLMLESY 266

Query: 273 IPA 265
           +PA
Sbjct: 267 LPA 269


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