BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008568
         (1220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75706.1| hypothetical protein VITISV_031419 [Vitis vinifera]   337   4e-90
emb|CBI28917.3| unnamed protein product [Vitis vinifera]              333   5e-89
ref|XP_002517974.1| conserved hypothetical protein [Ricinus comm...   333   7e-89
ref|XP_002329402.1| predicted protein [Populus trichocarpa] gi|2...   299   1e-78
ref|XP_003636623.1| H/ACA ribonucleoprotein complex non-core sub...   293   8e-77

>emb|CAN75706.1| hypothetical protein VITISV_031419 [Vitis vinifera]
          Length = 641

 Score =  337 bits (864), Expect = 4e-90
 Identities = 186/384 (48%), Positives = 241/384 (62%), Gaps = 11/384 (2%)
 Frame = +1

Query: 97   DEEEILVGSDEDEP------ALKGPIKSKNEIQILPPVPPVDATLKPHHKTLPVGVIMSM 258
            +EEE++ GSD D           G IKSKNEI+ LPPVPP+D TL+PHH+TLPVGV+ S+
Sbjct: 191  EEEEMIAGSDYDGEDDSCGNVKGGAIKSKNEIEALPPVPPLDVTLQPHHQTLPVGVVSSI 250

Query: 259  MDTKVVVEGLEKHSPLNEGSILWITETRTPLGLVDEVFGPVKNPFYIVRYNSEQEVPAGL 438
            +  KV+VEG EKH PL EGSILWITE+R+PLGL+DE+FGPVKNP+Y+VRYNS+ EVPAG+
Sbjct: 251  IGAKVIVEGAEKHKPLTEGSILWITESRSPLGLIDEIFGPVKNPYYVVRYNSDSEVPAGI 310

Query: 439  SEGTSVSFVSDFAYHVLNDKNLYKKGYDASGENDEELGDEVEFSDDEKEAEYRKAQRMAS 618
            +EGT +SFV  FA H+LN++NLYKKGYDASGENDEE+ D VEFSDDE+EAE+++  +M  
Sbjct: 311  NEGTFISFVPQFANHILNERNLYKKGYDASGENDEEVSD-VEFSDDEEEAEHKRTLKMIK 369

Query: 619  KGSSDRKRGNQEFVARKKVQHKDRSWKNGQPPA---QPLGGPSNQTNMANQFCTPPVETX 789
            +G++D+K GN++   RKKV+++D +WKNGQ      Q      ++T   +Q  TP V   
Sbjct: 370  RGTNDQKPGNKK-NKRKKVKNRDGAWKNGQHSTAADQFFDDKHSKTPDHDQHHTPQVAAS 428

Query: 790  XXXXXRVASFSIXXXXXXXXXXXXXXXXXXHANYCTPNLMPANGVWMNG-MPGQQQQQII 966
                   + F +                   A +    + P +G+W +G MP QQQQ  +
Sbjct: 429  -------SPFGVGQFFAGGGLVPPYPQMAQVAGF----IPPPSGIWASGIMPCQQQQNTV 477

Query: 967  FHNGFPMNGMAIQQPGHYQQSPQMLNGFPSGMPFQQQFDPNQRIMQNMALPYGQPNFSSG 1146
            F N FP + +      H+    QM    P+GM FQQQFDP      N  L  GQ NF   
Sbjct: 478  FPNSFPRDTLPWPPQNHHPHPFQM--PMPNGMLFQQQFDPGHAAFPNAVLSSGQANFFMR 535

Query: 1147 PC-ASWPGNLGQPRLNQAQFGFGL 1215
            P    WPG   Q  LNQA FG GL
Sbjct: 536  PTYPPWPGLGAQSGLNQAAFGMGL 559


>emb|CBI28917.3| unnamed protein product [Vitis vinifera]
          Length = 444

 Score =  333 bits (854), Expect = 5e-89
 Identities = 181/361 (50%), Positives = 232/361 (64%), Gaps = 5/361 (1%)
 Frame = +1

Query: 148  GPIKSKNEIQILPPVPPVDATLKPHHKTLPVGVIMSMMDTKVVVEGLEKHSPLNEGSILW 327
            G IKSKNEI+ LPPVPP+D TL+PHH+TLPVGV+ S++  KV+VEG EKH PL EGSILW
Sbjct: 20   GAIKSKNEIEALPPVPPLDVTLQPHHQTLPVGVVSSIIGAKVIVEGAEKHKPLTEGSILW 79

Query: 328  ITETRTPLGLVDEVFGPVKNPFYIVRYNSEQEVPAGLSEGTSVSFVSDFAYHVLNDKNLY 507
            ITE+R+PLGLVDE+FGPVKNP+Y+VRYNS+ EVPAG++EGT +SFV +FA H+LN++NLY
Sbjct: 80   ITESRSPLGLVDEIFGPVKNPYYVVRYNSDSEVPAGINEGTFISFVPEFANHILNERNLY 139

Query: 508  KKGYDASGENDEELGDEVEFSDDEKEAEYRKAQRMASKGSSDRKRGNQEFVARKKVQHKD 687
            KKGYDASGENDEE+ D VEFSDDE+EAE++K  +M  +G++D+K GN++   RKKV+++D
Sbjct: 140  KKGYDASGENDEEVSD-VEFSDDEEEAEHKKTLKMIKRGTNDQKPGNKK-NKRKKVKNRD 197

Query: 688  RSWKNGQPPA---QPLGGPSNQTNMANQFCTPPVETXXXXXXRVASFSIXXXXXXXXXXX 858
             +WKNGQ      Q      ++T   +Q  TP V          + F +           
Sbjct: 198  GAWKNGQHSTAADQFFDDKHSKTPDHDQHHTPQVAAS-------SPFGVGQFFAGGGLVP 250

Query: 859  XXXXXXXHANYCTPNLMPANGVWMNG-MPGQQQQQIIFHNGFPMNGMAIQQPGHYQQSPQ 1035
                    A +    + P +G+W +G MP QQQQ  +F N FP + +      H+    Q
Sbjct: 251  PYPQMAQVAGF----IPPPSGIWASGIMPCQQQQNTVFPNSFPTDTLPWPPQNHHPHPFQ 306

Query: 1036 MLNGFPSGMPFQQQFDPNQRIMQNMALPYGQPNFSSGPC-ASWPGNLGQPRLNQAQFGFG 1212
            M    P+GM FQQQFDP      N  L  GQ NF   P    WPG   Q  LNQA FG G
Sbjct: 307  M--PMPNGMLFQQQFDPGHAAFPNAVLSSGQANFFMRPTYPPWPGLGAQSGLNQAAFGMG 364

Query: 1213 L 1215
            L
Sbjct: 365  L 365


>ref|XP_002517974.1| conserved hypothetical protein [Ricinus communis]
            gi|223542956|gb|EEF44492.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 786

 Score =  333 bits (853), Expect = 7e-89
 Identities = 173/376 (46%), Positives = 235/376 (62%)
 Frame = +1

Query: 85   IKYFDEEEILVGSDEDEPALKGPIKSKNEIQILPPVPPVDATLKPHHKTLPVGVIMSMMD 264
            +++ D EE     +E    +KGPI+S+NE++ LPPVPPVD TL+PHH+ LPVGV++S+++
Sbjct: 358  VEFDDIEE----EEEGTGLMKGPIRSQNELKFLPPVPPVDVTLQPHHQVLPVGVVLSIIN 413

Query: 265  TKVVVEGLEKHSPLNEGSILWITETRTPLGLVDEVFGPVKNPFYIVRYNSEQEVPAGLSE 444
             +V+VEG+EKH+PLNEGSILWITE R+PLGLVDE+FGPV+NP+Y+VRYNSE EVP+G+S+
Sbjct: 414  AQVIVEGVEKHNPLNEGSILWITEKRSPLGLVDEIFGPVQNPYYVVRYNSESEVPSGISQ 473

Query: 445  GTSVSFVSDFAYHVLNDKNLYKKGYDASGENDEELGDEVEFSDDEKEAEYRKAQRMASKG 624
            GT +SFV++FA HVLN+KNLYKKGYDASGENDEEL DE EFSDDEKEAEY + ++M+ +G
Sbjct: 474  GTRISFVAEFANHVLNEKNLYKKGYDASGENDEELSDEAEFSDDEKEAEYMRMKKMSKRG 533

Query: 625  SSDRKRGNQEFVARKKVQHKDRSWKNGQPPAQPLGGPSNQTNMANQFCTPPVETXXXXXX 804
             + +  GN     +K  + KD++    +    PLG      +M      PP +       
Sbjct: 534  INGQTVGN-----KKNSRTKDKNRNGNRKNVGPLG---QHASMCGGQLPPPNQNQQNTSS 585

Query: 805  RVASFSIXXXXXXXXXXXXXXXXXXHANYCTPNLMPANGVWMNGMPGQQQQQIIFHNGFP 984
             VAS +                             P+NG W++G+  QQ Q  +   GFP
Sbjct: 586  AVASMNNYSSSSSFTGGASFFQPFPPMAQSAGLFQPSNGAWISGLASQQPQNAVIPGGFP 645

Query: 985  MNGMAIQQPGHYQQSPQMLNGFPSGMPFQQQFDPNQRIMQNMALPYGQPNFSSGPCASWP 1164
             N M+      +    +M     +GMPFQQQF P+Q  + N   P GQ +F +GP + WP
Sbjct: 646  ANNMSWAAQNQFHPPSRM--PITNGMPFQQQFIPSQGSLSNGVPPGGQMSFFAGP-SPWP 702

Query: 1165 GNLGQPRLNQAQFGFG 1212
              +GQ   NQA F  G
Sbjct: 703  AVIGQNCFNQAPFEMG 718


>ref|XP_002329402.1| predicted protein [Populus trichocarpa] gi|222870452|gb|EEF07583.1|
            predicted protein [Populus trichocarpa]
          Length = 685

 Score =  299 bits (765), Expect = 1e-78
 Identities = 168/371 (45%), Positives = 218/371 (58%), Gaps = 8/371 (2%)
 Frame = +1

Query: 124  DEDEPALK--GPIKSKNEIQILPPVPPVDATLKPHHKTLPVGVIMSMMDTKVVVEGLEKH 297
            DEDE A+    PI+SKNE++ LPPVPPV A+L+PHH+   VG ++S + ++V+VEG+EKH
Sbjct: 274  DEDEDAVNEGDPIRSKNELKFLPPVPPVVASLEPHHQMQAVGAVLSAIGSQVIVEGVEKH 333

Query: 298  SPLNEGSILWITETRTPLGLVDEVFGPVKNPFYIVRYNSEQEVPAGLSEGTSVSFVSDFA 477
            +PLNEGSILWITE R+PLGLVDE+FGPVKNP+Y+VRYNSE EVP G+  GT +SFV +FA
Sbjct: 334  NPLNEGSILWITEKRSPLGLVDEIFGPVKNPYYVVRYNSESEVPGGIHNGTVISFVPEFA 393

Query: 478  YHVLNDKNLYKKGYDASGENDEELGDEVEFSDDEKEAEYRKAQRMASKGSSDRKRGNQEF 657
             HVLNDKNLYKKGYDASGE DEEL  E EFSDD++EAEY++  +M+ +G      G ++ 
Sbjct: 394  NHVLNDKNLYKKGYDASGEFDEELTKEAEFSDDDEEAEYKRMLKMSKRGIDCEMVGKKK- 452

Query: 658  VARKKVQHKDRSWKNGQPPAQPL-GGPSNQTNMANQFCTPPVETXXXXXXRVASFSIXXX 834
              R+KV+++   WKN +P  + +  G    +   N F    V T      +         
Sbjct: 453  NNRRKVKNRGGGWKNNKPSGEQIPTGVDQLSPDQNLFNESSVGTAFAPVPQ--------- 503

Query: 835  XXXXXXXXXXXXXXXHANYCTPNLMPANGVWMNGMPGQQQQQIIFHNGFPMNGM---AIQ 1005
                                T  +   NG W+N  P  Q + +    GFP N M   A  
Sbjct: 504  --------------------TTGVFTPNGGWVNEAPSHQPETLAIPGGFPANNMPWAARS 543

Query: 1006 QPGHYQQSPQMLNGFPSGMPFQQQFDPNQRIMQNMALPYGQPNFSSGPC--ASWPGNLGQ 1179
            Q  H  Q P+ +     GMP QQQF+P +  + N   P G PNF +GP     WP   GQ
Sbjct: 544  QLQHPYQIPRAI-----GMPIQQQFNPCKGPLPNAFFPGGHPNFFAGPTYPPPWPAVGGQ 598

Query: 1180 PRLNQAQFGFG 1212
               NQA FG G
Sbjct: 599  NYFNQAAFGTG 609


>ref|XP_003636623.1| H/ACA ribonucleoprotein complex non-core subunit NAF1 [Medicago
            truncatula] gi|355502558|gb|AES83761.1| H/ACA
            ribonucleoprotein complex non-core subunit NAF1 [Medicago
            truncatula]
          Length = 567

 Score =  293 bits (749), Expect = 8e-77
 Identities = 171/363 (47%), Positives = 216/363 (59%), Gaps = 3/363 (0%)
 Frame = +1

Query: 124  DEDEPALKGPIKSKNEIQILPPVPPVDATLKPHHKTLPVGVIMSMMDTKVVVEGLEKHSP 303
            D+DE  + GPIKSKNEIQ LPPVPPVD  L PHHK LPVGV+MS +  +V+VEG+EKH P
Sbjct: 166  DDDEDVVVGPIKSKNEIQNLPPVPPVDVCLAPHHKMLPVGVVMSTLGAQVIVEGVEKHEP 225

Query: 304  LNEGSILWITETRTPLGLVDEVFGPVKNPFYIVRYNSEQEVPAGLSEGTS-VSFVSDFAY 480
            LNEGS+LW+TE+R PLGLVDE+FGPVKNP+Y+VRYNSE +VPAG+  GT+ VS V +FA 
Sbjct: 226  LNEGSVLWLTESRKPLGLVDEIFGPVKNPYYVVRYNSENDVPAGIQGGTTLVSCVPEFAE 285

Query: 481  HVLNDKNLYKKGYDASGENDEELGDEVEFSDDEKEAEYRKAQRMASKGSSDRKRGNQEFV 660
            HVLN+K+LY+KGYDASG  DEEL DEVEFSDDEKEAEYRK Q+M  +G +D+  G     
Sbjct: 286  HVLNNKDLYRKGYDASGAYDEELFDEVEFSDDEKEAEYRKMQKMTKRGVNDQNPGK---- 341

Query: 661  ARKKVQHKDRSWKNGQPPAQPLGGPSNQTNMANQFCTPPVETXXXXXXRVASFSIXXXXX 840
             +K  + K    ++  PP  P+  P    N+ N     P            ++S      
Sbjct: 342  -KKNNKKKFSPKEHVLPPNAPVASPHVFPNVPNAPAAAP-------FVNKGNYSPFSGIG 393

Query: 841  XXXXXXXXXXXXXHANYCTPNLMPANGVWMNGMP-GQQQQQIIFHNGFPMNGMAIQQPGH 1017
                         +A    PN   AN +W N     QQ Q  +  N FP N M+     +
Sbjct: 394  QGGTTTVSPFQPLNAG---PN-FAANSMWANQTTFPQQPQPSLPPNAFPSNAMS-----Y 444

Query: 1018 YQQSPQMLNGFP-SGMPFQQQFDPNQRIMQNMALPYGQPNFSSGPCASWPGNLGQPRLNQ 1194
            Y Q+ Q  + FP  G+PFQQQ +P+        +P  QPN  S      PG LGQ ++ Q
Sbjct: 445  YPQNTQFSHQFPVPGIPFQQQMNPSHGTHFPTMMPGVQPNIFSQQPMYAPGFLGQNQMPQ 504

Query: 1195 AQF 1203
              F
Sbjct: 505  QSF 507