BLASTX nr result

ID: Coptis21_contig00008555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008555
         (1273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK93511.1| unknown [Populus trichocarpa]                          168   2e-39
ref|XP_002319263.1| predicted protein [Populus trichocarpa] gi|2...   166   1e-38
ref|XP_002283181.1| PREDICTED: uncharacterized protein LOC100265...   165   2e-38
ref|XP_002316956.1| predicted protein [Populus trichocarpa] gi|2...   163   8e-38
gb|AFK40544.1| unknown [Lotus japonicus]                              161   3e-37

>gb|ABK93511.1| unknown [Populus trichocarpa]
          Length = 325

 Score =  168 bits (426), Expect = 2e-39
 Identities = 127/343 (37%), Positives = 182/343 (53%), Gaps = 29/343 (8%)
 Frame = -2

Query: 1185 MXXXGAMRAATKVASFGL-NNGIRNITSSLPLQEQSIPPTARKASRPIVSSSTDGKPSVL 1009
            M   GAMRAA KVA  G+ N+GIR   S +P    S+  + R ASRP VS+     PS  
Sbjct: 1    MGGGGAMRAAAKVAGIGVVNSGIRGGISCVP---PSVEQSVRNASRP-VSAIISSTPS-- 54

Query: 1008 VSEGKYDDGSSSFSGAKPSCW--DDWEFT---EDDVLRLDVMNPKPRVVFGNVP-TFQEA 847
                    G  + +  +PS W  D+WEF    E++ + +    P  RVVFG  P + QEA
Sbjct: 55   -------GGEVAATVQRPS-WELDEWEFAGGLEEETV-VHSAEPVARVVFGGAPPSLQEA 105

Query: 846  KEATSDLKEALEKEYFSS----------------------SGYSETKVCVASESAISSVP 733
            + AT +L +A +K Y SS                      S   ETK C+  +   + VP
Sbjct: 106  EAATFELNDAFQKVYLSSPNSGTGSSVGGSQLSGLPLLRKSESLETKDCIPCDPTGAPVP 165

Query: 732  KPVFHAFSLLKESPEAQGVVASLASDKNVWDAVMQNEKVMEYINSHQTSTSSDTATQVNQ 553
            K    AFSLL ESP+ Q VVA++ASD NVW+AV +NE + +++ S  T T S  A +  +
Sbjct: 166  KYAMQAFSLLNESPKIQTVVAAVASDPNVWNAVWENEALQDFLQSQNTYTQSSEAKEFVR 225

Query: 552  TFPVNEFYNNLKSSECLNDDSTGKHSEGSGNAFLDFIEKVKITVTDMVSSLSGFLQSIFR 373
                 +  ++   +E  +D+S    S+      +D I  VK+TV D+V++LS + Q IF 
Sbjct: 226  DTDFQDAVSSKNLAELSDDESEAGSSQ---TELVDIINNVKLTVVDLVTNLSAYFQKIFS 282

Query: 372  GSADENISVDSNGNASAIHVDKTIGASFMALSVLAIMVVVLKR 244
             S+ E+    +N +A A  ++KTIGAS M L+V+ IMVVVL+R
Sbjct: 283  FSSAEHTPA-ANESAGAATIEKTIGASLMGLAVIVIMVVVLRR 324


>ref|XP_002319263.1| predicted protein [Populus trichocarpa] gi|222857639|gb|EEE95186.1|
            predicted protein [Populus trichocarpa]
          Length = 325

 Score =  166 bits (420), Expect = 1e-38
 Identities = 126/343 (36%), Positives = 181/343 (52%), Gaps = 29/343 (8%)
 Frame = -2

Query: 1185 MXXXGAMRAATKVASFGL-NNGIRNITSSLPLQEQSIPPTARKASRPIVSSSTDGKPSVL 1009
            M   GAMRAA KVA  G+ N+GIR   S +P    S+  + R ASRP VS+     PS  
Sbjct: 1    MGGGGAMRAAAKVAGIGVVNSGIRGGISCVP---PSVEQSVRNASRP-VSAIISSTPS-- 54

Query: 1008 VSEGKYDDGSSSFSGAKPSCW--DDWEFT---EDDVLRLDVMNPKPRVVFGNVP-TFQEA 847
                    G  + +  +PS W  D+WEF    E++ + +    P  RVVFG  P + QEA
Sbjct: 55   -------GGEVAATVQRPS-WELDEWEFAGGLEEETV-VHSAEPVARVVFGGAPPSLQEA 105

Query: 846  KEATSDLKEALEKEYFSS----------------------SGYSETKVCVASESAISSVP 733
            + AT +L +A +K Y SS                      S   ETK C+  +   + VP
Sbjct: 106  EAATFELNDAFQKVYLSSPNSGTGSSVGGSQLSGLPLLRKSDSLETKDCIPCDPTGAPVP 165

Query: 732  KPVFHAFSLLKESPEAQGVVASLASDKNVWDAVMQNEKVMEYINSHQTSTSSDTATQVNQ 553
            K    AFSLL ESP+ Q VVA++ASD NVW+AV +NE + +++ S  T T S  A +  +
Sbjct: 166  KYAMQAFSLLNESPKIQTVVAAVASDPNVWNAVWENEALQDFLQSQNTYTQSSEAKEFVR 225

Query: 552  TFPVNEFYNNLKSSECLNDDSTGKHSEGSGNAFLDFIEKVKITVTDMVSSLSGFLQSIFR 373
                 +  ++   +E  +D+S    S+      +D I  VK+TV D+V+++S + Q IF 
Sbjct: 226  DTDFQDAVSSKNLAELSDDESEAGSSQ---TELVDIINNVKLTVVDLVTNVSAYFQKIFS 282

Query: 372  GSADENISVDSNGNASAIHVDKTIGASFMALSVLAIMVVVLKR 244
             S+ E+    +N  A A  ++KTIGAS M L+V+ IMVVVL+R
Sbjct: 283  FSSAEHTPA-ANEIAGAATIEKTIGASLMGLAVIVIMVVVLRR 324


>ref|XP_002283181.1| PREDICTED: uncharacterized protein LOC100265933 [Vitis vinifera]
          Length = 339

 Score =  165 bits (418), Expect = 2e-38
 Identities = 124/354 (35%), Positives = 183/354 (51%), Gaps = 46/354 (12%)
 Frame = -2

Query: 1167 MRAATKVASFGL-NNGIRNITSSLPLQEQSIPPTARKASRPIVSSSTDGKPSVLVSEGKY 991
            MR A KVA  G+ N G+R   +  P+ EQ +   ARKA+ P+ S         ++S  K 
Sbjct: 6    MRTAAKVAGVGVVNAGLRGAPAVQPV-EQPMAAAARKATVPVSS---------VISSAKL 55

Query: 990  DDGSSSFSGAKPSCW--DDWEFTE-DDVLRLDVMNPKPRVVFGNVPTFQEAKEATSDLKE 820
             D   S    +PS W  DDWEF   ++ + +    P PRVVFG VPT QEAKEATS+LK+
Sbjct: 56   GDAPVSVQ--RPS-WELDDWEFASVEEEINIGTGEPLPRVVFGGVPTLQEAKEATSELKD 112

Query: 819  ALEKEYFS------------------SSGYSETKVCVAS-ESAISSVPKPVFHAFSLLKE 697
            AL++ Y S                  +S + ETK CVA+ E+ +++VP     AF+ LK+
Sbjct: 113  ALDQLYLSPSRSIRSGVQQLGLLQIANSDHLETKACVATTENTVATVPAHAIQAFAYLKD 172

Query: 696  SPEAQGVVASLASDKNVWDAVMQNEKVMEYINSHQT------------STSSDTATQVNQ 553
            SP AQ VVAS+ASD NVW AVMQNE ++E++ + +T             + +DT  Q +Q
Sbjct: 173  SPAAQNVVASIASDPNVWSAVMQNEALVEFLQAQKTCAPYPSMGLNAEESVADTGFQ-DQ 231

Query: 552  TFPVN-----------EFYNNLKSSECLNDDSTGKHSEGSGNAFLDFIEKVKITVTDMVS 406
              P +             + N ++ +   D S    S    + F   +E +K+++ ++V 
Sbjct: 232  EAPKSFEDSSDEGDSGSRFQNKETPKSFEDSSDAGDSGSLSSWFASLLETMKLSLAEIVG 291

Query: 405  SLSGFLQSIFRGSADENISVDSNGNASAIHVDKTIGASFMALSVLAIMVVVLKR 244
            ++ G      R +AD   S DSN       ++  +GAS   L+V+ IMVVV+KR
Sbjct: 292  NIFG------RPAADVKSSPDSNEKPEGQVMNMGLGASLTGLAVMVIMVVVMKR 339


>ref|XP_002316956.1| predicted protein [Populus trichocarpa] gi|222860021|gb|EEE97568.1|
            predicted protein [Populus trichocarpa]
          Length = 326

 Score =  163 bits (413), Expect = 8e-38
 Identities = 126/343 (36%), Positives = 179/343 (52%), Gaps = 29/343 (8%)
 Frame = -2

Query: 1185 MXXXGAMRAATKVASFGLNN-GIRN-ITSSLPLQEQSIPPTARKASRPIVSSSTDGKPSV 1012
            M   G MRAA KV   G+ N GIR  I+   P  EQS+    R AS P VS+    K S 
Sbjct: 1    MGGGGVMRAAVKVVGTGVANAGIRRGISGGTPPVEQSM----RNASSP-VSAIMSSKAS- 54

Query: 1011 LVSEGKYDDGSSSFSGAKPSCW--DDWEFTE--DDVLRLDVMNPKPRVVF-GNVPTFQEA 847
                     G    +G +   W  D+WE     ++ + +D   P  RVVF G+ P+ QEA
Sbjct: 55   ---------GGEVAAGMQRPAWEVDEWELAGGVEEEMVVDSAEPVARVVFWGSPPSLQEA 105

Query: 846  KEATSDLKEALEKEYFSS---------------------SGYSETKVCVASESAISSVPK 730
            K AT +LK+AL+K Y SS                     S + ET  C++ +   + VPK
Sbjct: 106  KAATCELKDALQKVYLSSPNLGTGSSLGGSQLSGHPLTNSDFLETNGCISCDPNRAPVPK 165

Query: 729  PVFHAFSLLKESPEAQGVVASLASDKNVWDAVMQNEKVMEYINSHQTSTSSDTATQ-VNQ 553
                AFSLL ESP+ Q VVA+LASD NVW+AV +NE + E + S  T+       + V  
Sbjct: 166  YAMQAFSLLNESPKIQTVVAALASDPNVWNAVWENEALQELLQSQNTNKEYVADNESVGD 225

Query: 552  TFPVNEFYNNLKSSECLNDDSTGKHSEGSGNAFLDFIEKVKITVTDMVSSLSGFLQSIFR 373
            T   +   ++ K +E  +D+S   +S+      +D I  +K+TV DMV+++S + Q IF 
Sbjct: 226  TDSQDAAVSSKKLTELSDDESETGNSQ---TRLMDVINNIKLTVVDMVTNVSAYFQKIFS 282

Query: 372  GSADENISVDSNGNASAIHVDKTIGASFMALSVLAIMVVVLKR 244
             S+ E+    ++ NA     +KT+GAS MAL+V+ IMVVVL+R
Sbjct: 283  FSSAEHTPDAADENAGLSTTEKTLGASLMALAVMVIMVVVLRR 325


>gb|AFK40544.1| unknown [Lotus japonicus]
          Length = 324

 Score =  161 bits (408), Expect = 3e-37
 Identities = 130/347 (37%), Positives = 171/347 (49%), Gaps = 33/347 (9%)
 Frame = -2

Query: 1185 MXXXGAMRAATKVASFGLN---NGIRNITSSLPLQEQSIPPTARKASRPIVSSSTDGKPS 1015
            M   G MR+A K+A   +    +G R   S++  ++ S  P++R AS   V +S  GK +
Sbjct: 1    MGGGGTMRSAAKIAGTTIGMARSGFRGSPSTVVTEKFSRRPSSRHASPVRVKTSQGGKAA 60

Query: 1014 VLVSEGKYDDGSSSFSGAKPSCWDDWEFTEDDVLRLDVMNPKPRVVFGNVPTFQEAKEAT 835
                       ++    A      DWEF +   L +    P PRVVFG VP+FQEAKEAT
Sbjct: 61   E----------AAPLHTAAAVDLSDWEFADAGDLVISAGEPMPRVVFGEVPSFQEAKEAT 110

Query: 834  SDLKEALEKEYFS--SSGYSET------------------KVCVASESAIS--SVPKPVF 721
             +LK+A+EK Y S  SS Y E+                  K C   E AIS  SVPK   
Sbjct: 111  IELKDAIEKMYLSSDSSQYEESFPDNQISVLPHTLFEPVNKSCDV-EGAISNLSVPKHAI 169

Query: 720  HAFSLLKESPEAQGVVASLASDKNVWDAVMQNEKVMEYINSHQTSTSSDTATQVNQTFPV 541
             AF LL  S E Q VVAS+ASD NVW AVMQN  V  +  S QT    +       T  V
Sbjct: 170  QAFELLSASSEVQTVVASIASDSNVWKAVMQNPAVNSFFQSQQTMADFEAE---GTTAKV 226

Query: 540  NEFYNNLKSSECLNDDSTGKHSE------GSGNAFLDFIEKVKITVTDMVSSLSGFLQSI 379
             E          L DD T   SE      G    F+  ++ +K+TV +MVS +S +LQ+I
Sbjct: 227  VE----------LTDDDTVTGSEEPEIHSGIAFDFIGLLQNLKLTVAEMVSRVSNYLQNI 276

Query: 378  FRGSADENISVDSNGNASAIHVD--KTIGASFMALSVLAIMVVVLKR 244
            F     E  S D++GN  A  +D    +G SFM L++L IMVV++KR
Sbjct: 277  FPTGEKEKSSGDTDGNTKANVMDSMNVMGGSFMGLAMLVIMVVLVKR 323


Top