BLASTX nr result

ID: Coptis21_contig00008550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008550
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68394.1| hypothetical protein VITISV_042519 [Vitis vinifera]   136   2e-30
ref|XP_002263612.1| PREDICTED: uncharacterized protein LOC100256...   136   3e-30
ref|XP_002315089.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
gb|AFK37052.1| unknown [Medicago truncatula]                          125   6e-27
ref|XP_003595924.1| DNA-3-methyladenine glycosylase [Medicago tr...   125   6e-27

>emb|CAN68394.1| hypothetical protein VITISV_042519 [Vitis vinifera]
          Length = 398

 Score =  136 bits (343), Expect = 2e-30
 Identities = 94/208 (45%), Positives = 118/208 (56%), Gaps = 9/208 (4%)
 Frame = -1

Query: 602 CSSKAKPCQGGVLVDLISPPLAEIDGRSVLQPGGNRVPISLERRNXXXXXXXXXXXXXP- 426
           CSSK+K  QG   +D I+P  A+I+GR  LQP  NR+P SLER +               
Sbjct: 2   CSSKSKLHQG---ID-ITPSKAQINGRPALQPTCNRIP-SLERHHSFKKISPKSPTSPLP 56

Query: 425 ------TSNNHXXXXXXXXXXXXXXXXXXXXXPALKRGNDPNGLTSSVDKTLTPRSTPKL 264
                 T+  +                     PALKRGNDPNGL SS++K LTPR T K 
Sbjct: 57  ASLPPPTTIINTTKTKPSLTPPASPNLKSPRQPALKRGNDPNGLNSSLEKVLTPRGTTKS 116

Query: 263 VR--KKSKKSTANNGSGGGIVVPTLEFSSLNYSSLSIVESPGSIAAARREQVTLLQAQRK 90
               KK+KK +A        + P+ + SSLNYSS  IVE+PGSIAAARREQ+ ++Q QRK
Sbjct: 117 SSSPKKTKKCSAG-------LAPSSDTSSLNYSSSFIVEAPGSIAAARREQMAIMQVQRK 169

Query: 89  MRIAHYGRTNSGKFEGKVVPLDSSSIST 6
           MRIAHYGRT S K+E K+ P+D   I+T
Sbjct: 170 MRIAHYGRTKSAKYEEKISPVDPLVITT 197


>ref|XP_002263612.1| PREDICTED: uncharacterized protein LOC100256507 [Vitis vinifera]
           gi|297738175|emb|CBI27376.3| unnamed protein product
           [Vitis vinifera]
          Length = 398

 Score =  136 bits (342), Expect = 3e-30
 Identities = 94/208 (45%), Positives = 118/208 (56%), Gaps = 9/208 (4%)
 Frame = -1

Query: 602 CSSKAKPCQGGVLVDLISPPLAEIDGRSVLQPGGNRVPISLERRNXXXXXXXXXXXXXP- 426
           CSSK+K  QG   +D I+P  A+I+GR  LQP  NR+P SLER +               
Sbjct: 2   CSSKSKLHQG---ID-ITPSKAQINGRPALQPTCNRIP-SLERHHSFKKISPKSPTSPLP 56

Query: 425 ------TSNNHXXXXXXXXXXXXXXXXXXXXXPALKRGNDPNGLTSSVDKTLTPRSTPKL 264
                 T+  +                     PALKRGNDPNGL SS++K LTPR T K 
Sbjct: 57  ASPPPPTTIINTTKTKPSLTPPASPNLKSPRQPALKRGNDPNGLNSSLEKVLTPRGTTKS 116

Query: 263 VR--KKSKKSTANNGSGGGIVVPTLEFSSLNYSSLSIVESPGSIAAARREQVTLLQAQRK 90
               KK+KK +A        + P+ + SSLNYSS  IVE+PGSIAAARREQ+ ++Q QRK
Sbjct: 117 SSSPKKTKKCSAG-------LAPSSDTSSLNYSSSLIVEAPGSIAAARREQMAIMQVQRK 169

Query: 89  MRIAHYGRTNSGKFEGKVVPLDSSSIST 6
           MRIAHYGRT S K+E K+ P+D   I+T
Sbjct: 170 MRIAHYGRTKSAKYEEKIGPVDPLVITT 197


>ref|XP_002315089.1| predicted protein [Populus trichocarpa] gi|222864129|gb|EEF01260.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score =  129 bits (325), Expect = 3e-28
 Identities = 93/208 (44%), Positives = 113/208 (54%), Gaps = 8/208 (3%)
 Frame = -1

Query: 602 CSSKAKPCQGGVLVDLISPPLAEIDGRSVLQPGGNRVPISLERRNXXXXXXXXXXXXXP- 426
           CSS AK   G      I+P +A I+GR VLQP  NRVP +LER N             P 
Sbjct: 2   CSSNAKVTTGVE----ITPAVARINGRPVLQPTCNRVP-TLERHNSLKKTAPKSPPPPPP 56

Query: 425 -----TSNNHXXXXXXXXXXXXXXXXXXXXXPALKRGNDPNGLTSSVDKTLTPRSTPK-- 267
                TS N                       A+KRG+D N L SS DK + PRST K  
Sbjct: 57  PLPPPTSANKTNKASPPLSPKSKSPRLP----AIKRGSDANSLNSSSDKVVIPRSTAKTP 112

Query: 266 LVRKKSKKSTANNGSGGGIVVPTLEFSSLNYSSLSIVESPGSIAAARREQVTLLQAQRKM 87
           ++ +K  KS      G G +  ++E +SL+YSS  IVE+PGSIAA RREQ+ L  AQRKM
Sbjct: 113 ILERKKSKSFKETSVGSGALSSSIE-ASLSYSSSLIVEAPGSIAAVRREQMALQHAQRKM 171

Query: 86  RIAHYGRTNSGKFEGKVVPLDSSSISTT 3
           RIAHYGR+ S +FE KVVP+DSS   TT
Sbjct: 172 RIAHYGRSKSSRFEAKVVPVDSSINVTT 199


>gb|AFK37052.1| unknown [Medicago truncatula]
          Length = 390

 Score =  125 bits (314), Expect = 6e-27
 Identities = 90/199 (45%), Positives = 108/199 (54%), Gaps = 3/199 (1%)
 Frame = -1

Query: 602 CSSKAKPCQGGVLVDLISPPLAEIDGRSVLQPGGNRVPISLERRNXXXXXXXXXXXXXPT 423
           CSSKAK    G+     +P +A I+GR VLQP  N VP +LERRN             P 
Sbjct: 2   CSSKAKEVTVGI-ESSTAPHVARINGRPVLQPTCNHVP-NLERRNSIKKSTPKSLSPLPL 59

Query: 422 SNNHXXXXXXXXXXXXXXXXXXXXXPALKRGNDPNGLTSSVDKTLTPRS---TPKLVRKK 252
            N                        A+KRGND NGL  S +K   P++   TP L RKK
Sbjct: 60  PNKTNTSSLTPPISPKPKSPTSTRPLAIKRGNDNNGLNLSCEKISIPKNIMKTPTLERKK 119

Query: 251 SKKSTANNGSGGGIVVPTLEFSSLNYSSLSIVESPGSIAAARREQVTLLQAQRKMRIAHY 72
           SK  +   GS G      +E +SL+YSS  I +SPGSIAA RREQV L QAQRKM+IAHY
Sbjct: 120 SK--SFKEGSFG------IEAASLSYSSSLITDSPGSIAAVRREQVALQQAQRKMKIAHY 171

Query: 71  GRTNSGKFEGKVVPLDSSS 15
           GR+ S KFE +V P+D SS
Sbjct: 172 GRSKSAKFE-RVFPIDPSS 189


>ref|XP_003595924.1| DNA-3-methyladenine glycosylase [Medicago truncatula]
           gi|355484972|gb|AES66175.1| DNA-3-methyladenine
           glycosylase [Medicago truncatula]
          Length = 390

 Score =  125 bits (314), Expect = 6e-27
 Identities = 90/199 (45%), Positives = 108/199 (54%), Gaps = 3/199 (1%)
 Frame = -1

Query: 602 CSSKAKPCQGGVLVDLISPPLAEIDGRSVLQPGGNRVPISLERRNXXXXXXXXXXXXXPT 423
           CSSKAK    G+     +P +A I+GR VLQP  N VP +LERRN             P 
Sbjct: 2   CSSKAKEVTVGI-ESSTTPHVARINGRPVLQPTCNHVP-NLERRNSIKKSTPKSLSPLPL 59

Query: 422 SNNHXXXXXXXXXXXXXXXXXXXXXPALKRGNDPNGLTSSVDKTLTPRS---TPKLVRKK 252
            N                        A+KRGND NGL  S +K   P++   TP L RKK
Sbjct: 60  PNKTNTSSLTPPISPKPKSPTSTRPLAIKRGNDNNGLNLSCEKISIPKNIMKTPTLERKK 119

Query: 251 SKKSTANNGSGGGIVVPTLEFSSLNYSSLSIVESPGSIAAARREQVTLLQAQRKMRIAHY 72
           SK  +   GS G      +E +SL+YSS  I +SPGSIAA RREQV L QAQRKM+IAHY
Sbjct: 120 SK--SFKEGSFG------IEAASLSYSSSLITDSPGSIAAVRREQVALQQAQRKMKIAHY 171

Query: 71  GRTNSGKFEGKVVPLDSSS 15
           GR+ S KFE +V P+D SS
Sbjct: 172 GRSKSAKFE-RVFPIDPSS 189


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