BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008548
         (1148 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273201.1| PREDICTED: chlorophyll a-b binding protein 8...   443   e-122
gb|ABJ99590.1| type III chlorophyll a/b-binding protein [Lycoris...   441   e-121
ref|XP_002524566.1| chlorophyll A/B binding protein, putative [R...   441   e-121
gb|ABJ99591.1| type III chlorophyll a/b-binding protein [Lycoris...   441   e-121
ref|XP_004139075.1| PREDICTED: chlorophyll a-b binding protein 8...   440   e-121

>ref|XP_002273201.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Vitis
           vinifera]
          Length = 274

 Score =  443 bits (1139), Expect = e-122
 Identities = 212/255 (83%), Positives = 224/255 (87%)
 Frame = +1

Query: 199 RQVFGGRAVVPTSLRKSSFIVKAAATPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDP 378
           RQ+ G R +   S + SSF+V+AA+TPPVKQGADRPLWFASKQSL+YLDGSLPGDYGFDP
Sbjct: 19  RQILGSRPLQSPSRKSSSFVVRAASTPPVKQGADRPLWFASKQSLTYLDGSLPGDYGFDP 78

Query: 379 LGLSDPEGTGGFIEPNWLAYGEVINGRYAMLGAVGAIAPEIFGKLGLIPAETALPWFQTG 558
           LGLSDPEGTGGFIEP WLAYGEVINGRYAMLGAVGAIAPEI GKLGLIP ETALPWF+TG
Sbjct: 79  LGLSDPEGTGGFIEPRWLAYGEVINGRYAMLGAVGAIAPEILGKLGLIPPETALPWFKTG 138

Query: 559 VIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGCMGKQYFLGLEKYLGGSGNP 738
           V PPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWA PG MGKQYFLGLEKYLGGSG+P
Sbjct: 139 VFPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKYLGGSGDP 198

Query: 739 IYXXXXXXXXXXXXKDEKSLNELKLKEVKNGRLAMLAILGYFIQGLVTGVGPFQNLLDHL 918
            Y            KDEKSL +LKLKEVKNGRLAMLAILGYF QG VTGVGP QNLLDHL
Sbjct: 199 AYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFAQGPVTGVGPLQNLLDHL 258

Query: 919 ADPVNNNVLTSLKFH 963
           ADPVNNN++TSLKFH
Sbjct: 259 ADPVNNNIITSLKFH 273


>gb|ABJ99590.1| type III chlorophyll a/b-binding protein [Lycoris aurea]
          Length = 275

 Score =  441 bits (1134), Expect = e-121
 Identities = 216/261 (82%), Positives = 227/261 (86%), Gaps = 6/261 (2%)
 Frame = +1

Query: 199 RQVFGGRAVVPT------SLRKSSFIVKAAATPPVKQGADRPLWFASKQSLSYLDGSLPG 360
           RQ+ GGR V  T      S RK+SF+VKAA+TPPVKQGADR LWFASKQSLSYLDGSLPG
Sbjct: 15  RQLLGGRPVQWTPSRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 361 DYGFDPLGLSDPEGTGGFIEPNWLAYGEVINGRYAMLGAVGAIAPEIFGKLGLIPAETAL 540
           D+GFDPLGLSDPEGTGGFIEP WLAYGE+INGRYAMLG  GAIAPEI GKLGLIP ETAL
Sbjct: 75  DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 541 PWFQTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGCMGKQYFLGLEKYL 720
           PWFQTGVIPPAGTY+YWADPYTLFV EMALMGFAEHRRFQDWAKPG MGKQYFLG EK+L
Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKFL 194

Query: 721 GGSGNPIYXXXXXXXXXXXXKDEKSLNELKLKEVKNGRLAMLAILGYFIQGLVTGVGPFQ 900
           GGSG+P Y            KDEKS+ ELKLKEVKNGRLAMLAILG+FIQGLVTGVGPFQ
Sbjct: 195 GGSGDPAYPGGPIFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGFFIQGLVTGVGPFQ 254

Query: 901 NLLDHLADPVNNNVLTSLKFH 963
           NLLDHLADPVNNNVLTSLKFH
Sbjct: 255 NLLDHLADPVNNNVLTSLKFH 275


>ref|XP_002524566.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223536119|gb|EEF37774.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 273

 Score =  441 bits (1133), Expect = e-121
 Identities = 209/255 (81%), Positives = 227/255 (89%)
 Frame = +1

Query: 199 RQVFGGRAVVPTSLRKSSFIVKAAATPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDP 378
           RQ+ G R+   +S + SSF+V+A++TPPVKQGADR LWFASKQSL+YLDGSLPGD+GFDP
Sbjct: 19  RQILGARSSFGSSRKSSSFVVRASSTPPVKQGADRQLWFASKQSLTYLDGSLPGDFGFDP 78

Query: 379 LGLSDPEGTGGFIEPNWLAYGEVINGRYAMLGAVGAIAPEIFGKLGLIPAETALPWFQTG 558
           LGLSDPEGTGGFIEP WLAYGE+INGR+AMLGA GAIAPEI GK GLIP ETALPWFQTG
Sbjct: 79  LGLSDPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPPETALPWFQTG 138

Query: 559 VIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGCMGKQYFLGLEKYLGGSGNP 738
           VIPPAGTY+YWADPYTLFVFEMALMGFAEHRRFQDWAKPG MGKQYFLGLEK+LGGSG+P
Sbjct: 139 VIPPAGTYDYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDP 198

Query: 739 IYXXXXXXXXXXXXKDEKSLNELKLKEVKNGRLAMLAILGYFIQGLVTGVGPFQNLLDHL 918
            Y            KDEKS+ ELKLKEVKNGRLAMLAILGYF+QGLVTGVGP+QNLLDHL
Sbjct: 199 AYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHL 258

Query: 919 ADPVNNNVLTSLKFH 963
           ADPVNNNVLTSLKFH
Sbjct: 259 ADPVNNNVLTSLKFH 273


>gb|ABJ99591.1| type III chlorophyll a/b-binding protein [Lycoris aurea]
          Length = 275

 Score =  441 bits (1133), Expect = e-121
 Identities = 216/261 (82%), Positives = 228/261 (87%), Gaps = 6/261 (2%)
 Frame = +1

Query: 199 RQVFGGRAV--VPT----SLRKSSFIVKAAATPPVKQGADRPLWFASKQSLSYLDGSLPG 360
           RQ+ GGR V   PT    S RK+SF+VKAA+TPPVKQGADR LWFASKQSLSYLDGSLPG
Sbjct: 15  RQLLGGRPVQWTPTRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 361 DYGFDPLGLSDPEGTGGFIEPNWLAYGEVINGRYAMLGAVGAIAPEIFGKLGLIPAETAL 540
           D+GFDPLGLSDPEGTGGFIEP WLAYGE+INGRYAMLG  GAIAPEI GKLGLIP ETAL
Sbjct: 75  DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 541 PWFQTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGCMGKQYFLGLEKYL 720
           PWFQTGVIPPAGTY+YWADPYTLFV EMALMGFAEHRRFQDWAKPG MGKQYFLG EK+L
Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKFL 194

Query: 721 GGSGNPIYXXXXXXXXXXXXKDEKSLNELKLKEVKNGRLAMLAILGYFIQGLVTGVGPFQ 900
           GGSG+P Y            KDE+S+ ELKLKEVKNGRLAMLAILG+FIQGLVTGVGPFQ
Sbjct: 195 GGSGDPAYPGGPIFNPLGFGKDERSMKELKLKEVKNGRLAMLAILGFFIQGLVTGVGPFQ 254

Query: 901 NLLDHLADPVNNNVLTSLKFH 963
           NLLDHLADPVNNNVLTSLKFH
Sbjct: 255 NLLDHLADPVNNNVLTSLKFH 275


>ref|XP_004139075.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
           [Cucumis sativus] gi|449532766|ref|XP_004173351.1|
           PREDICTED: chlorophyll a-b binding protein 8,
           chloroplastic-like [Cucumis sativus]
          Length = 273

 Score =  440 bits (1131), Expect = e-121
 Identities = 211/255 (82%), Positives = 225/255 (88%)
 Frame = +1

Query: 199 RQVFGGRAVVPTSLRKSSFIVKAAATPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDP 378
           RQ  G R    +S + +SF+V+A ATPPVKQGADR LWFASKQSLSYLDGSLPGD+GFDP
Sbjct: 19  RQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDP 78

Query: 379 LGLSDPEGTGGFIEPNWLAYGEVINGRYAMLGAVGAIAPEIFGKLGLIPAETALPWFQTG 558
           LGLSDPEGTGGFIEP WLAYGEVINGR+AMLGA GAIAPEIFG LGLIP ETALPWF+TG
Sbjct: 79  LGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTG 138

Query: 559 VIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGCMGKQYFLGLEKYLGGSGNP 738
           VIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPG MGKQYFLGLEK+LGGSG+P
Sbjct: 139 VIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDP 198

Query: 739 IYXXXXXXXXXXXXKDEKSLNELKLKEVKNGRLAMLAILGYFIQGLVTGVGPFQNLLDHL 918
            Y            KDEKS+ ELKLKE+KNGRLAMLAILGYFIQGLVTGVGP+QNLLDHL
Sbjct: 199 AYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHL 258

Query: 919 ADPVNNNVLTSLKFH 963
           +DPVNNNVLTSLKFH
Sbjct: 259 SDPVNNNVLTSLKFH 273