BLASTX nr result

ID: Coptis21_contig00008543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008543
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278183.2| PREDICTED: uncharacterized protein LOC100264...   136   4e-30
emb|CAN75110.1| hypothetical protein VITISV_033385 [Vitis vinifera]   136   4e-30
ref|XP_002323912.1| predicted protein [Populus trichocarpa] gi|2...   129   7e-28
ref|XP_002524849.1| nucleic acid binding protein, putative [Rici...   127   2e-27
gb|AFK48014.1| unknown [Medicago truncatula]                          127   3e-27

>ref|XP_002278183.2| PREDICTED: uncharacterized protein LOC100264609 [Vitis vinifera]
           gi|296084320|emb|CBI24708.3| unnamed protein product
           [Vitis vinifera]
          Length = 198

 Score =  136 bits (342), Expect = 4e-30
 Identities = 64/71 (90%), Positives = 70/71 (98%)
 Frame = +1

Query: 1   EWHAARLASLKTSHTVTWEEFKRKQKEDELKKGELEADKDKMMREYRAQLDAERESKLAN 180
           EWHAARLASLKTSHT+TWEEFK+KQKEDEL+KGELEADKDKMMREYRAQLDAER SKLA+
Sbjct: 38  EWHAARLASLKTSHTITWEEFKKKQKEDELRKGELEADKDKMMREYRAQLDAERASKLAH 97

Query: 181 GRNHSSSKTNN 213
           GRNHSSSK+N+
Sbjct: 98  GRNHSSSKSNH 108


>emb|CAN75110.1| hypothetical protein VITISV_033385 [Vitis vinifera]
          Length = 188

 Score =  136 bits (342), Expect = 4e-30
 Identities = 64/71 (90%), Positives = 70/71 (98%)
 Frame = +1

Query: 1   EWHAARLASLKTSHTVTWEEFKRKQKEDELKKGELEADKDKMMREYRAQLDAERESKLAN 180
           EWHAARLASLKTSHT+TWEEFK+KQKEDEL+KGELEADKDKMMREYRAQLDAER SKLA+
Sbjct: 28  EWHAARLASLKTSHTITWEEFKKKQKEDELRKGELEADKDKMMREYRAQLDAERASKLAH 87

Query: 181 GRNHSSSKTNN 213
           GRNHSSSK+N+
Sbjct: 88  GRNHSSSKSNH 98


>ref|XP_002323912.1| predicted protein [Populus trichocarpa] gi|222866914|gb|EEF04045.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score =  129 bits (323), Expect = 7e-28
 Identities = 72/160 (45%), Positives = 84/160 (52%)
 Frame = +1

Query: 1   EWHAARLASLKTSHTVTWEEFKRKQKEDELKKGELEADKDKMMREYRAQLDAERESKLAN 180
           EWHAARLASL  SHTVTWEEFK+KQKEDE++ GELEADKD+MMREYRAQLDAER  KLA+
Sbjct: 38  EWHAARLASLNKSHTVTWEEFKKKQKEDEMRNGELEADKDRMMREYRAQLDAERAHKLAH 97

Query: 181 GRNHSSSKTNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIXXXX 360
           GRNHS SK+++                                            +    
Sbjct: 98  GRNHSGSKSSHKKDRKDRDLKKRRSKKRKHSRRRSDDSSSSSSSSDSSSSEDERELKRSK 157

Query: 361 XXXXXXXXXXXXXXXXXHSSDSEESDGPLPLSRFFGIAKS 480
                             SSD EE+ GP+PLSRFFG  K+
Sbjct: 158 SKSRKTKEKKHKSRPKHSSSDDEEAGGPVPLSRFFGSLKN 197


>ref|XP_002524849.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223535812|gb|EEF37473.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 199

 Score =  127 bits (320), Expect = 2e-27
 Identities = 60/70 (85%), Positives = 66/70 (94%)
 Frame = +1

Query: 4   WHAARLASLKTSHTVTWEEFKRKQKEDELKKGELEADKDKMMREYRAQLDAERESKLANG 183
           WHAARLASL TSHTVTWEEFKRKQKEDE++KGELEAD D+MMREYRAQLDAER  KLA+G
Sbjct: 39  WHAARLASLNTSHTVTWEEFKRKQKEDEIRKGELEADTDRMMREYRAQLDAERARKLAHG 98

Query: 184 RNHSSSKTNN 213
           RNHSSSK+N+
Sbjct: 99  RNHSSSKSNH 108


>gb|AFK48014.1| unknown [Medicago truncatula]
          Length = 201

 Score =  127 bits (318), Expect = 3e-27
 Identities = 59/71 (83%), Positives = 66/71 (92%)
 Frame = +1

Query: 1   EWHAARLASLKTSHTVTWEEFKRKQKEDELKKGELEADKDKMMREYRAQLDAERESKLAN 180
           EWHAARLASLKTSHT+TWEE+K+KQKE+ELKKGELEAD DKMMREYRAQLDAER  KL+ 
Sbjct: 38  EWHAARLASLKTSHTITWEEYKKKQKEEELKKGELEADADKMMREYRAQLDAERSRKLSQ 97

Query: 181 GRNHSSSKTNN 213
           GRNHSSSK+ +
Sbjct: 98  GRNHSSSKSKH 108


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