BLASTX nr result

ID: Coptis21_contig00008542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008542
         (1322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264990.1| PREDICTED: uncharacterized protein At4g00950...   140   1e-30
ref|XP_002523324.1| conserved hypothetical protein [Ricinus comm...   120   8e-25
ref|XP_002321992.1| predicted protein [Populus trichocarpa] gi|2...   119   1e-24
gb|ADN33748.1| hypothetical protein [Cucumis melo subsp. melo]        108   3e-21
ref|XP_002516652.1| conserved hypothetical protein [Ricinus comm...   105   3e-20

>ref|XP_002264990.1| PREDICTED: uncharacterized protein At4g00950 [Vitis vinifera]
           gi|147794098|emb|CAN71155.1| hypothetical protein
           VITISV_030317 [Vitis vinifera]
           gi|297745486|emb|CBI40566.3| unnamed protein product
           [Vitis vinifera]
          Length = 228

 Score =  140 bits (352), Expect = 1e-30
 Identities = 97/239 (40%), Positives = 124/239 (51%), Gaps = 13/239 (5%)
 Frame = +2

Query: 233 MGFEAVHEPCSTPKISYFSLPSQXXXXXXXXXXXXXXXSSIPFFWEEAPGKPRXXXXXXX 412
           MG +A  +P   PK+  FS+  Q               +S+PF WEE PGKPR       
Sbjct: 1   MGSQAESDPSYAPKLPLFSIAMQEPEPSGTQTPPLQTTASVPFRWEEEPGKPR-----PC 55

Query: 413 XXXXXFSKPSSARCLELPPRLL-SEVKSTNMPSPSTVLDGPYIARSVSHSAVF--ARERL 583
                 SK SSARCL+ PPRL  S+VK + MPSP+TVL+GPY+ARS    + F  AR+R 
Sbjct: 56  TALVALSKSSSARCLDPPPRLFSSDVKLSKMPSPTTVLEGPYVARSAFQCSSFRVARDRR 115

Query: 584 ASFQELGSISKRRESK----EKGYFAAWGRKSTKRSTRVCED-SCAISSCPSSLG----G 736
            SF   GS  + +        +G+F  WGRK+ K              S P++ G    G
Sbjct: 116 HSFGRGGSPERGQLGAMVLGRRGFFGGWGRKNHKGKREASRSLDLEEGSSPATTGDYDSG 175

Query: 737 AGDSEDITKVKITRFRRTGSLFNLSSSRRHSHLWASIYGTFKQVVPRPW-RSRKTKKDG 910
            G SE     K+TR  R+G   +LS +R  SH WAS+Y   KQVV  PW RS+K KKDG
Sbjct: 176 GGSSE-----KMTRMSRSGRYLSLSQAR--SHFWASVYEGLKQVV--PWKRSKKLKKDG 225


>ref|XP_002523324.1| conserved hypothetical protein [Ricinus communis]
           gi|223537412|gb|EEF39040.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 239

 Score =  120 bits (301), Expect = 8e-25
 Identities = 94/250 (37%), Positives = 117/250 (46%), Gaps = 23/250 (9%)
 Frame = +2

Query: 233 MGFEAVHEPCSTPKISYFSLPSQXXXXXXXXXXXXXXXSS--IPFFWEEAPGKPRXXXXX 406
           MG EA  E  STP++  F  P                 SS  +PF WEE PGKPR     
Sbjct: 1   MGSEAEAEDSSTPRLPLFLKPPYVQSPQRSGMLTPPLYSSAAVPFRWEEEPGKPRECSGA 60

Query: 407 XXXXXXXFSKPSSARCLELPPRLLSEVKSTNMPSPSTVLDGPYIARS----VSHSAVFAR 574
                       S +CLELPPRLL E   + +PSP+TVLDGPY  RS     S   +  R
Sbjct: 61  ITTPTDL-----SPKCLELPPRLLLEANVSKLPSPTTVLDGPYTGRSSRFQSSSFRMIRR 115

Query: 575 ERLASF--------QELGSISKRRESKEKGYFAA--WGRKSTKRSTRVCEDSCAISSCPS 724
           E   SF        Q    +  +R  K++G+  +  WGR+  K    V   S    S  S
Sbjct: 116 ECYGSFRTCSPERDQFTALVLSKRGIKDRGFLGSWRWGRRGFKGKREVAGASYVFPS--S 173

Query: 725 SL-----GGAGDSEDIT--KVKITRFRRTGSLFNLSSSRRHSHLWASIYGTFKQVVPRPW 883
           S+      G  + ++I+   V ITR RR+GS     S+   SH WA+IY   KQVV  PW
Sbjct: 174 SMDREVEDGNEEEKEISSKNVTITRIRRSGSF----STSSRSHFWATIYEGLKQVV--PW 227

Query: 884 RSRKTKKDGF 913
           RS K KKDGF
Sbjct: 228 RSGKLKKDGF 237


>ref|XP_002321992.1| predicted protein [Populus trichocarpa] gi|222868988|gb|EEF06119.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score =  119 bits (299), Expect = 1e-24
 Identities = 85/219 (38%), Positives = 109/219 (49%), Gaps = 5/219 (2%)
 Frame = +2

Query: 251 HEPCSTPKISYFSLPSQXXXXXXXXXXXXXXX-SSIPFFWEEAPGKPRXXXXXXXXXXXX 427
           ++P  TPK+S FSL S+                +S+PF WEEAPGKPR            
Sbjct: 10  YDPSPTPKLSLFSLSSKLHESPAGMLTPPIHTLASVPFKWEEAPGKPRPSCATQ------ 63

Query: 428 FSKPSSARCLELPPRLLSEVKSTNMPSPSTVLDGPYIARSVSHSAVFARERLASFQELGS 607
            SKP  ARCLELPPRLL+E K +NMPSP+TV DGPY+ RS+S   +     L++ + LG 
Sbjct: 64  -SKPKFARCLELPPRLLNEAKVSNMPSPTTVFDGPYLPRSLS---LGKGRSLSNLENLG- 118

Query: 608 ISKRRESKEKGYFAA--WG--RKSTKRSTRVCEDSCAISSCPSSLGGAGDSEDITKVKIT 775
                 SKE+  F +  WG  RK+ K            +     +G      +  +VKIT
Sbjct: 119 -CGEVNSKERVTFGSGRWGFFRKNNKE---------VAAPSHGDIGVNHGGREAVRVKIT 168

Query: 776 RFRRTGSLFNLSSSRRHSHLWASIYGTFKQVVPRPWRSR 892
           R RR  S   LS +R  SH W  I  +FK  V  PW  R
Sbjct: 169 RIRRRSSFLGLSHTR--SHFWTDICESFKHAV--PWTRR 203


>gb|ADN33748.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 234

 Score =  108 bits (270), Expect = 3e-21
 Identities = 77/233 (33%), Positives = 106/233 (45%), Gaps = 5/233 (2%)
 Frame = +2

Query: 233 MGFEAVHEPCSTP-KISYFSLPSQXXXXXXXXXXXXXXXSSIPFFWEEAPGKPRXXXXXX 409
           M F     P STP K+S FSLP Q                S+PF WEEAPGKPR      
Sbjct: 1   MRFVTGENPSSTPPKLSLFSLPRQPPEPPGMVTPPLHASISVPFQWEEAPGKPRPFGIIE 60

Query: 410 XXXXXXFSKPSSARCLELPPRLLSEVKSTNMPSPSTVLDGPYIARSVSHSAVF----ARE 577
                  SKP SAR L+LPPRL ++ K  +  SP+T +D P   R +S S  F       
Sbjct: 61  PN-----SKPKSARSLDLPPRLFADAKVAHFASPTTAVDEPIFGRDLSSSLSFRFPDTWA 115

Query: 578 RLASFQELGSISKRRESKEKGYFAAWGRKSTKRSTRVCEDSCAISSCPSSLGGAGDSEDI 757
                    + +  RE K+  Y  +    S +++  + +    I+         G S+  
Sbjct: 116 ETVRATATATATGTREGKDGKYVGSRRWMSFRKNKEIPKSGSEIAVTGGGDRNVGSSDGE 175

Query: 758 TKVKITRFRRTGSLFNLSSSRRHSHLWASIYGTFKQVVPRPWRSRKTKKDGFS 916
           T+VKITRFR   S F   +S+  SH  A+IYG+ KQ +   WR +  + +  S
Sbjct: 176 TRVKITRFRSRRSFFRKPNSK--SHFIANIYGSLKQAI--SWRRKGDEMENIS 224


>ref|XP_002516652.1| conserved hypothetical protein [Ricinus communis]
           gi|223544147|gb|EEF45671.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 218

 Score =  105 bits (262), Expect = 3e-20
 Identities = 79/208 (37%), Positives = 101/208 (48%), Gaps = 12/208 (5%)
 Frame = +2

Query: 251 HEPCSTPKISYFSLPS----QXXXXXXXXXXXXXXXSSIPFFWEEAPGKPRXXXXXXXXX 418
           HEP   PK+S  SLP+    Q               +S+PF WEEAPGKPR         
Sbjct: 11  HEPSPAPKLSLLSLPNKPYEQQQQQPGLLTPPIHAPASVPFKWEEAPGKPRPSCTNNKSN 70

Query: 419 XXXFS-KPSSA-RCLELPPRLLSEV-KSTNMPSPSTVLDGPYIARSVSHS--AVFARERL 583
                 KP +A RCL+LPPRLL E  K  N+PSP+TVLDGPY+  + +       +R R 
Sbjct: 71  SNNHHPKPKTAKRCLDLPPRLLFEASKVNNIPSPTTVLDGPYMGTTTTRDDHQSLSRSRS 130

Query: 584 ASFQELGSISKRRESKEKGYFAAWG--RKSTKRSTRVCEDSCAIS-SCPSSLGGAGDSED 754
            SF +  S    ++  +KG  + WG  RK +     VC+ S   S  C     G  D + 
Sbjct: 131 LSFGKGRSFIGLQKLNKKG-SSRWGSFRKDSNTKEVVCDGSVDFSVPC-----GFDDGDH 184

Query: 755 ITKVKITRFRRTGSLFNLSSSRRHSHLW 838
            +KVKITR +R  S     SS   SHLW
Sbjct: 185 GSKVKITRIKRKPSFLTSFSSSSRSHLW 212


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