BLASTX nr result

ID: Coptis21_contig00008532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008532
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330217.1| predicted protein [Populus trichocarpa] gi|2...   185   7e-45
ref|XP_002271045.1| PREDICTED: uncharacterized protein LOC100265...   182   5e-44
emb|CAN69598.1| hypothetical protein VITISV_014708 [Vitis vinifera]   181   1e-43
ref|XP_002512452.1| conserved hypothetical protein [Ricinus comm...   180   2e-43
gb|ABK94023.1| unknown [Populus trichocarpa]                          179   5e-43

>ref|XP_002330217.1| predicted protein [Populus trichocarpa] gi|222871673|gb|EEF08804.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  185 bits (469), Expect = 7e-45
 Identities = 87/160 (54%), Positives = 119/160 (74%), Gaps = 8/160 (5%)
 Frame = -1

Query: 579 CVLFISISFLPTQSSASKLS-------AYEVLRSYDFPVGLLPQGVTGYELEPKTGKFAA 421
           C++ I    LP+ SS+ + S       AYE+L  Y+FP GLLP+GV GY L+  TG+F+A
Sbjct: 9   CLILILSQSLPSSSSSQETSFLDQKPTAYEILGDYNFPKGLLPKGVVGYSLDTTTGRFSA 68

Query: 420 YLNGSCSFSIQG-YQLKYKSKITGYISKDKLTELKGVTVKILFIWVNIIEVTSSGNELGF 244
           +LNGSCSFS++G YQL+YKS + GYIS+ +L+ L+GV+VK+ F+WV+I+EV  +G++L F
Sbjct: 69  FLNGSCSFSLEGSYQLRYKSSVNGYISQGRLSRLEGVSVKVFFMWVDIVEVLRNGDDLEF 128

Query: 243 SVGIISANFPIDNFDESPQCGCGFECNKKKKKVWSIRTNP 124
           SVGI  A FPIDNF+E PQCGCG  C+  K+KV  IR+NP
Sbjct: 129 SVGIAGAGFPIDNFEECPQCGCGLNCSGAKRKVSKIRSNP 168


>ref|XP_002271045.1| PREDICTED: uncharacterized protein LOC100265898 [Vitis vinifera]
          Length = 162

 Score =  182 bits (462), Expect = 5e-44
 Identities = 88/157 (56%), Positives = 118/157 (75%), Gaps = 1/157 (0%)
 Frame = -1

Query: 591 VFYFCVLFISISFLPTQSSASKLSAYEVLRSYDFPVGLLPQGVTGYELEPKTGKFAAYLN 412
           V   CV+F+S        S +   AYE+L+SY+FP+GLLP+G  GY+L+  TGKF AY N
Sbjct: 6   VLVLCVIFLSSIVTADDDSPT---AYEILQSYNFPMGLLPKGALGYDLDKDTGKFNAYFN 62

Query: 411 GSCSFSIQG-YQLKYKSKITGYISKDKLTELKGVTVKILFIWVNIIEVTSSGNELGFSVG 235
           GSC FS++G YQLKYKS I+GYIS++KLT+L G++VK+LF+W+NI+EVT +G+++ FSVG
Sbjct: 63  GSCGFSLEGSYQLKYKSTISGYISQNKLTKLSGISVKVLFLWLNIVEVTRNGDDMEFSVG 122

Query: 234 IISANFPIDNFDESPQCGCGFECNKKKKKVWSIRTNP 124
           I SA FPIDNF E PQCGCG +C     +V  ++TNP
Sbjct: 123 IASAAFPIDNFFECPQCGCGLDC--VNGQVRKLKTNP 157


>emb|CAN69598.1| hypothetical protein VITISV_014708 [Vitis vinifera]
          Length = 162

 Score =  181 bits (458), Expect = 1e-43
 Identities = 88/157 (56%), Positives = 117/157 (74%), Gaps = 1/157 (0%)
 Frame = -1

Query: 591 VFYFCVLFISISFLPTQSSASKLSAYEVLRSYDFPVGLLPQGVTGYELEPKTGKFAAYLN 412
           V   CV+F+S        S +   AYE+L+SY+FP+GLLP+G  GY+L+  TGKF AY N
Sbjct: 6   VLVLCVIFLSSIVTADDDSPT---AYEILQSYNFPMGLLPKGALGYDLDKDTGKFNAYFN 62

Query: 411 GSCSFSIQG-YQLKYKSKITGYISKDKLTELKGVTVKILFIWVNIIEVTSSGNELGFSVG 235
           GSC FS++G YQLKYKS I+GYIS++KLT+L G +VK+LF+W+NI+EVT +G+++ FSVG
Sbjct: 63  GSCGFSLEGSYQLKYKSTISGYISQNKLTKLSGXSVKVLFLWLNIVEVTRNGDDMEFSVG 122

Query: 234 IISANFPIDNFDESPQCGCGFECNKKKKKVWSIRTNP 124
           I SA FPIDNF E PQCGCG +C     +V  ++TNP
Sbjct: 123 IASAAFPIDNFFECPQCGCGLDC--VNGQVRKLKTNP 157


>ref|XP_002512452.1| conserved hypothetical protein [Ricinus communis]
           gi|255591191|ref|XP_002535460.1| conserved hypothetical
           protein [Ricinus communis] gi|223523035|gb|EEF26923.1|
           conserved hypothetical protein [Ricinus communis]
           gi|223548413|gb|EEF49904.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 173

 Score =  180 bits (457), Expect = 2e-43
 Identities = 85/153 (55%), Positives = 120/153 (78%), Gaps = 1/153 (0%)
 Frame = -1

Query: 579 CVLFISISFLPTQSSASKLSAYEVLRSYDFPVGLLPQGVTGYELEPKTGKFAAYLNGSCS 400
           C++ +  S    +S   + +AYE+L  Y+FP GLLP+GV GY+L+  +GKF+A+LNG+CS
Sbjct: 17  CIVLLFSSSWLAKSVNEEPTAYEILSDYNFPKGLLPKGVIGYDLDTTSGKFSAFLNGTCS 76

Query: 399 FSIQG-YQLKYKSKITGYISKDKLTELKGVTVKILFIWVNIIEVTSSGNELGFSVGIISA 223
           FS++G YQL+YKS I G+ISK KL+ L+GV+VK+LF+WV+I+EV+ SG++L FSVGI  A
Sbjct: 77  FSLEGSYQLRYKSTIRGHISKGKLSSLQGVSVKLLFMWVDIVEVSRSGDDLEFSVGIAGA 136

Query: 222 NFPIDNFDESPQCGCGFECNKKKKKVWSIRTNP 124
            FPIDNF+ESPQCGCG +C   ++KV  +R+NP
Sbjct: 137 GFPIDNFEESPQCGCGLDCG-DRRKVSKMRSNP 168


>gb|ABK94023.1| unknown [Populus trichocarpa]
          Length = 167

 Score =  179 bits (453), Expect = 5e-43
 Identities = 87/151 (57%), Positives = 114/151 (75%), Gaps = 2/151 (1%)
 Frame = -1

Query: 597 NLVFYFCVLFISISFLPTQSSASKL-SAYEVLRSYDFPVGLLPQGVTGYELEPKTGKFAA 421
           NL F+F +L    S L   S    L + Y+VL  Y+FP+G+LP+G TGY+L+  TG+F A
Sbjct: 6   NLTFFFVLL----SSLAISSFTDNLPTTYDVLSGYNFPIGILPKGATGYDLDKATGRFRA 61

Query: 420 YLNGSCSFSIQG-YQLKYKSKITGYISKDKLTELKGVTVKILFIWVNIIEVTSSGNELGF 244
           YLNGSCSFS++G YQLKYKS ++GYIS+++LT+L GV+VKILF W++I+EV   G+EL F
Sbjct: 62  YLNGSCSFSLEGSYQLKYKSTVSGYISENRLTDLSGVSVKILFFWLDIVEVVRKGDELEF 121

Query: 243 SVGIISANFPIDNFDESPQCGCGFECNKKKK 151
           SVGI SA+F IDNF E PQCGCGF CN  ++
Sbjct: 122 SVGITSASFAIDNFYECPQCGCGFNCNNVER 152


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