BLASTX nr result

ID: Coptis21_contig00008526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008526
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001233878.1| isocitrate lyase [Solanum lycopersicum] gi|1...   200   2e-49
sp|P25248.1|ACEA_BRANA RecName: Full=Isocitrate lyase; Short=ICL...   199   3e-49
emb|CAA73792.1| glyoxysomal isocitrate lyase [Brassica napus]         199   3e-49
ref|XP_002885461.1| hypothetical protein ARALYDRAFT_479696 [Arab...   199   4e-49
ref|XP_004151880.1| PREDICTED: isocitrate lyase-like [Cucumis sa...   199   5e-49

>ref|NP_001233878.1| isocitrate lyase [Solanum lycopersicum]
           gi|1351841|sp|P49297.1|ACEA_SOLLC RecName:
           Full=Isocitrate lyase; Short=ICL; Short=Isocitrase;
           Short=Isocitratase gi|624211|gb|AAA82738.1| isocitrate
           lyase [Solanum lycopersicum]
          Length = 575

 Score =  200 bits (509), Expect = 2e-49
 Identities = 90/113 (79%), Positives = 105/113 (92%)
 Frame = -3

Query: 611 SVMAAVVRGWAFAHHADLIWMETASPDMMELTNFSEGVRSKRPETMLAYNLSPSFNWDAS 432
           SV AA+VRGWAFA + DL+WMET+SPDM+E T FS+GV++ RPE MLAYNLSPSFNWDAS
Sbjct: 388 SVEAAIVRGWAFAEYCDLVWMETSSPDMVECTKFSQGVKTLRPELMLAYNLSPSFNWDAS 447

Query: 431 GMNDMQMMDFIPRIAKLGFCWQFITMAGFHADALVIDTFAKDYAQRGMLAYVD 273
           GMND QMMDFIPRIAKLG+CWQFIT+AGFHADAL++DTFAKD+A+RGMLAYV+
Sbjct: 448 GMNDNQMMDFIPRIAKLGYCWQFITLAGFHADALIVDTFAKDFARRGMLAYVE 500


>sp|P25248.1|ACEA_BRANA RecName: Full=Isocitrate lyase; Short=ICL; Short=Isocitrase;
           Short=Isocitratase gi|167144|gb|AAA32992.1| isocitrate
           lyase [Brassica napus] gi|255220|gb|AAB23208.1|
           isocitrate lyase, threo-D S-isocitrate glyoxylate-lyase,
           IL {EC 4.1.3.1} [Brassica napus, seedlings, Peptide, 576
           aa] gi|447142|prf||1913424A isocitrate lyase
          Length = 576

 Score =  199 bits (507), Expect = 3e-49
 Identities = 93/113 (82%), Positives = 103/113 (91%)
 Frame = -3

Query: 611 SVMAAVVRGWAFAHHADLIWMETASPDMMELTNFSEGVRSKRPETMLAYNLSPSFNWDAS 432
           SV AAVVRGWAFA  ADLIWMETASPD+ E T F+EGV+SK PE MLAYNLSPSFNWDAS
Sbjct: 388 SVTAAVVRGWAFAQIADLIWMETASPDLNECTQFAEGVKSKTPEVMLAYNLSPSFNWDAS 447

Query: 431 GMNDMQMMDFIPRIAKLGFCWQFITMAGFHADALVIDTFAKDYAQRGMLAYVD 273
           GM D QMM+FIPRIA+LG+CWQFIT+AGFHADALV+DTFAKDYA+RGMLAYV+
Sbjct: 448 GMTDQQMMEFIPRIARLGYCWQFITLAGFHADALVVDTFAKDYARRGMLAYVE 500


>emb|CAA73792.1| glyoxysomal isocitrate lyase [Brassica napus]
          Length = 576

 Score =  199 bits (507), Expect = 3e-49
 Identities = 93/113 (82%), Positives = 103/113 (91%)
 Frame = -3

Query: 611 SVMAAVVRGWAFAHHADLIWMETASPDMMELTNFSEGVRSKRPETMLAYNLSPSFNWDAS 432
           SV AAVVRGWAFA  ADLIWMETASPD+ E T F+EGV+SK PE MLAYNLSPSFNWDAS
Sbjct: 388 SVTAAVVRGWAFAQIADLIWMETASPDLNECTQFAEGVKSKTPEVMLAYNLSPSFNWDAS 447

Query: 431 GMNDMQMMDFIPRIAKLGFCWQFITMAGFHADALVIDTFAKDYAQRGMLAYVD 273
           GM D QMM+FIPRIA+LG+CWQFIT+AGFHADALV+DTFAKDYA+RGMLAYV+
Sbjct: 448 GMTDQQMMEFIPRIARLGYCWQFITLAGFHADALVVDTFAKDYARRGMLAYVE 500


>ref|XP_002885461.1| hypothetical protein ARALYDRAFT_479696 [Arabidopsis lyrata subsp.
           lyrata] gi|297331301|gb|EFH61720.1| hypothetical protein
           ARALYDRAFT_479696 [Arabidopsis lyrata subsp. lyrata]
          Length = 576

 Score =  199 bits (506), Expect = 4e-49
 Identities = 92/122 (75%), Positives = 105/122 (86%)
 Frame = -3

Query: 611 SVMAAVVRGWAFAHHADLIWMETASPDMMELTNFSEGVRSKRPETMLAYNLSPSFNWDAS 432
           SV AAVVRGWAFA  AD+IWMETASPD+ E T FSEG++SK PE MLAYNLSPSFNWDAS
Sbjct: 388 SVAAAVVRGWAFAQIADIIWMETASPDLNECTQFSEGIKSKTPEVMLAYNLSPSFNWDAS 447

Query: 431 GMNDMQMMDFIPRIAKLGFCWQFITMAGFHADALVIDTFAKDYAQRGMLAYVDILHETNP 252
           GM D QM++FIPRIA+LG+CWQFIT+AGFHADALV+DTFAKDYA+RGMLAYV+ +     
Sbjct: 448 GMTDQQMVEFIPRIARLGYCWQFITLAGFHADALVVDTFAKDYARRGMLAYVERIQREER 507

Query: 251 LH 246
            H
Sbjct: 508 TH 509


>ref|XP_004151880.1| PREDICTED: isocitrate lyase-like [Cucumis sativus]
          Length = 576

 Score =  199 bits (505), Expect = 5e-49
 Identities = 90/113 (79%), Positives = 106/113 (93%)
 Frame = -3

Query: 611 SVMAAVVRGWAFAHHADLIWMETASPDMMELTNFSEGVRSKRPETMLAYNLSPSFNWDAS 432
           SVMAA+VRGWAFA HADLIWMET+SPD++E T F++G++S  PETMLAYNLSPSFNWDAS
Sbjct: 388 SVMAAIVRGWAFAPHADLIWMETSSPDLVECTTFAKGMKSIHPETMLAYNLSPSFNWDAS 447

Query: 431 GMNDMQMMDFIPRIAKLGFCWQFITMAGFHADALVIDTFAKDYAQRGMLAYVD 273
           GM+D QM +FIPRIA+LGFCWQFIT+AGFHADALV+DTFA+DYA+RGMLAYV+
Sbjct: 448 GMSDKQMEEFIPRIARLGFCWQFITLAGFHADALVVDTFARDYARRGMLAYVE 500


Top