BLASTX nr result

ID: Coptis21_contig00008519 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008519
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase A...    95   7e-18
emb|CBI15033.3| unnamed protein product [Vitis vinifera]               89   4e-16
ref|XP_002511396.1| ataxia telangiectasia mutated, putative [Ric...    80   2e-13
ref|XP_003522376.1| PREDICTED: serine/threonine-protein kinase A...    72   6e-11
ref|XP_003601263.1| Serine/threonine protein kinase ATM [Medicag...    67   2e-09

>ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase ATM [Vitis vinifera]
          Length = 2956

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 50/115 (43%), Positives = 72/115 (62%), Gaps = 1/115 (0%)
 Frame = +3

Query: 3   LLNGKESFLLNDSVIILLPAAIFSLSVGCAPFPYLIKNLSIANSCFDFSEVVEGGIMAKE 182
           LL  KESF+LN+ +++LLPA +++L  GC PF    K L I++S     + +E  +   E
Sbjct: 502 LLEWKESFILNERMVVLLPATVYALCTGCVPFTDCYKGLLISHSFLGVPDRIEDWLKTGE 561

Query: 183 NQRFR-YKLLECSVEVLAEIEKGSDAKAMQSESQHIVRLPCQISDPLRSEMETYI 344
            +R   +++ ECSVEVLAEI+  S  K  Q +    VRLP Q+ DPL +EMET+I
Sbjct: 562 YERESLHEVFECSVEVLAEIDLSSSVKVSQPQCHQNVRLPRQLRDPLLNEMETFI 616


>emb|CBI15033.3| unnamed protein product [Vitis vinifera]
          Length = 3085

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 46/110 (41%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
 Frame = +3

Query: 18  ESFLLNDSVIILLPAAIFSLSVGCAPFPYLIKNLSIANSCFDFSEVVEGGIMAKENQRFR 197
           +SF+LN+ +++LLPA +++L  GC PF    K L I++S     + +E  +   E +R  
Sbjct: 575 KSFILNERMVVLLPATVYALCTGCVPFTDCYKGLLISHSFLGVPDRIEDWLKTGEYERES 634

Query: 198 -YKLLECSVEVLAEIEKGSDAKAMQSESQHIVRLPCQISDPLRSEMETYI 344
            +++ ECSVEVLAEI+  S  K  Q +    VRLP Q+ DPL +EMET+I
Sbjct: 635 LHEVFECSVEVLAEIDLSSSVKVSQPQCHQNVRLPRQLRDPLLNEMETFI 684


>ref|XP_002511396.1| ataxia telangiectasia mutated, putative [Ricinus communis]
           gi|223550511|gb|EEF51998.1| ataxia telangiectasia
           mutated, putative [Ricinus communis]
          Length = 2954

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 45/116 (38%), Positives = 71/116 (61%), Gaps = 3/116 (2%)
 Frame = +3

Query: 6   LNGKESFLLNDSVIILLPAAIFSLSVGCAPFPYLIKNLSIANSCF---DFSEVVEGGIMA 176
           LN K++ +LN+ +++L PAA+++L  GCAPF +  K L  +++     D+++  E     
Sbjct: 509 LNWKDTSILNEHMVVLFPAAVYALCAGCAPFTHCYKGLLPSHNLEASGDWAKTYED---- 564

Query: 177 KENQRFRYKLLECSVEVLAEIEKGSDAKAMQSESQHIVRLPCQISDPLRSEMETYI 344
            E +R  Y+  ECSVEVLA+I+ GS  +   S+    V LPC++ D L  EMET+I
Sbjct: 565 -ECERL-YEPFECSVEVLAKIDLGSTVELASSQCNRSVSLPCELRDTLMHEMETHI 618


>ref|XP_003522376.1| PREDICTED: serine/threonine-protein kinase ATM-like [Glycine max]
          Length = 3439

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 43/114 (37%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
 Frame = +3

Query: 6    LNGKESFLLNDSVIILLPAAIFSLSVGCAPFPYLIKNLSIANSCFDFSEVVEGGIMAKE- 182
            LN K    LN+ +++ +P A+++L VG  PF    K L + ++ FD ++  +     +E 
Sbjct: 721  LNWKGYSTLNEQMVLFIPRAVYALCVGHVPFTRCFKELPLVHNYFDVADAQDDSHKFEEP 780

Query: 183  NQRFRYKLLECSVEVLAEIEKGSDAKAMQSESQHIVRLPCQISDPLRSEMETYI 344
              +   + L+CSVEVL EIEK S  +A Q +    VR+P +ISD L  EMET I
Sbjct: 781  KHQCLLEFLDCSVEVLTEIEKISKVEASQVKICPHVRVPREISDQLLHEMETSI 834


>ref|XP_003601263.1| Serine/threonine protein kinase ATM [Medicago truncatula]
           gi|355490311|gb|AES71514.1| Serine/threonine protein
           kinase ATM [Medicago truncatula]
          Length = 634

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/105 (34%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
 Frame = +3

Query: 33  NDSVIILLPAAIFSLSVGCAPFPYLIKNLSIANSCFDFSEVVEGGIMAKE-NQRFRYKLL 209
           N+ +++ +P A+F+L VGC  F    K + +  S FD +E ++     ++      ++ L
Sbjct: 211 NERILLYMPCAMFALCVGCVTFTECFKEIPLVYSSFDVTESLDNSHKLEDPKHECLHEFL 270

Query: 210 ECSVEVLAEIEKGSDAKAMQSESQHIVRLPCQISDPLRSEMETYI 344
           +CSVEVL EI K S+A+  + +    +R+P +ISD L  EME+ I
Sbjct: 271 DCSVEVLTEIHKVSNAEVSELQIFPGIRVPQEISDQLLLEMESSI 315


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