BLASTX nr result

ID: Coptis21_contig00008510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008510
         (1086 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285345.1| PREDICTED: uncharacterized protein LOC100259...   126   8e-27
ref|XP_002320028.1| predicted protein [Populus trichocarpa] gi|2...   121   3e-25
ref|XP_002510090.1| conserved hypothetical protein [Ricinus comm...   117   5e-24
ref|XP_002301147.1| predicted protein [Populus trichocarpa] gi|2...   113   9e-23
ref|XP_003589063.1| hypothetical protein MTR_1g017990 [Medicago ...   100   1e-18

>ref|XP_002285345.1| PREDICTED: uncharacterized protein LOC100259057 [Vitis vinifera]
          Length = 250

 Score =  126 bits (317), Expect = 8e-27
 Identities = 89/266 (33%), Positives = 134/266 (50%), Gaps = 14/266 (5%)
 Frame = -3

Query: 871 MVKPFICGVGSFQEEEEEDDDP-WSLS-TARGTKSYRSTXXXXXXXNPYSNRGLDKFAMV 698
           M+ P ICG  +F  E+++DD+  WS S T R ++  R +        PYS+RGLDKF+ +
Sbjct: 1   MLNPLICG--TFHPEDDDDDEAYWSTSSTTRRSRRGRDSKN------PYSSRGLDKFSAL 52

Query: 697 LAELDEKRRKIYEQMGSEDAKLVRFGYSSTRDWVPXXXXXXXXXXXXXXXXXXXXXKPAS 518
           LA+L+EKR++IY Q+GS+D   VRF YS++ D VP                         
Sbjct: 53  LADLEEKRQQIYSQVGSQDISFVRFAYSNSNDCVPIVVKLRDKKLENIKDNNV------- 105

Query: 517 TMNNSEVLDK--PQTGSAVSNEVVQEKTKLERRIKNKSLLSSRDVVVKWRRSHXXXXXXX 344
           T ++++V+D   P    A +NE  Q   + +   K K+  S +  V  WR+         
Sbjct: 106 THHSAQVVDDKFPIEAGAAANEFKQSGLETDTNTKKKTPFSWKIWVGNWRQPSYYLPAII 165

Query: 343 XXXXXXXXVYGKSFAILCTSIWWYLVPVMK-QKELNSRKSMKKKDYGRWLSENKMVAEGI 167
                   V+G+S AILCT + WYLVP +K    L+++K  KKK+Y R  S+  +V++G 
Sbjct: 166 IFILFLLTVFGRSVAILCTCLGWYLVPAIKGGSSLDTKKPTKKKEYVRRKSDKMVVSDGS 225

Query: 166 KSP---------IVKSFRRGHSNKSW 116
            SP         +    + GH  KSW
Sbjct: 226 SSPKTNKTRAVNVTSPGQHGH-RKSW 250


>ref|XP_002320028.1| predicted protein [Populus trichocarpa] gi|222860801|gb|EEE98343.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  121 bits (303), Expect = 3e-25
 Identities = 90/275 (32%), Positives = 131/275 (47%), Gaps = 21/275 (7%)
 Frame = -3

Query: 871 MVKPFICGVGSFQEEEEEDDDPW------------------SLSTARGTKSYRSTXXXXX 746
           M+  FICG  SF+ + E +++ W                  S  +A   KS +S+     
Sbjct: 1   MLSSFICG--SFKNQLEVEEESWNSPSSTPERSSPSATPERSSPSATPRKSRKSSKTGKN 58

Query: 745 XXNPYSNRGLDKFAMVLAELDEKRRKIYEQMGSEDAKLVRFGYSSTRDWVPXXXXXXXXX 566
             NPYS+RGLDKF+ +LAEL+EK++KIY QMG ED  +VRF YSS+ D +P         
Sbjct: 59  SKNPYSSRGLDKFSALLAELEEKKQKIYSQMGPEDVPMVRFVYSSSNDCIPLIIKVKDQK 118

Query: 565 XXXXXXXXXXXXKPASTMNNSEVLDK-PQTGSAVSNEVVQEKTKLERRIKNKSLLSSRDV 389
                       K      N+E LDK P        +V Q + +  ++ + KS   +   
Sbjct: 119 QDKPRIGSANDIKENPNTRNNEGLDKLPVEAPVEEKQVEQPRLETAKKTEKKSFTWNMK- 177

Query: 388 VVKWRRSHXXXXXXXXXXXXXXXVYGKSFAILCTSIWWYLVPVMKQKELNSRKSMKKKDY 209
           + +WRR +               ++G+S AIL TS+ WY+VP      L+++K  +KKDY
Sbjct: 178 LHRWRRPYYYMPVALILILLLVVLFGRSVAILLTSLAWYIVPA-----LSTKKPSQKKDY 232

Query: 208 GRWLSE--NKMVAEGIKSPIVKSFRRGHSNKSW*R 110
            R LSE    M+  G+ SP  KS   G +   W R
Sbjct: 233 VRRLSEPAKMMINHGVSSPARKS--TGSTADKWPR 265


>ref|XP_002510090.1| conserved hypothetical protein [Ricinus communis]
           gi|223550791|gb|EEF52277.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 246

 Score =  117 bits (293), Expect = 5e-24
 Identities = 87/260 (33%), Positives = 119/260 (45%), Gaps = 18/260 (6%)
 Frame = -3

Query: 871 MVKPFICGVGSFQEEEEEDDDPWSLSTARGTKSYRSTXXXXXXXNPYSNRGLDKFAMVLA 692
           M+ P ICG  SF  ++EEDD     S +  +   +S        NPYS RGLDKF+ +LA
Sbjct: 1   MLSPLICG--SFNHQQEEDDRDSLSSNSPCSTPRKSRKSNKDSKNPYSTRGLDKFSALLA 58

Query: 691 ELDEKRRKIYEQMGSEDAKLVRFGYSSTRDWVPXXXXXXXXXXXXXXXXXXXXXKPASTM 512
           EL+EKR+KIY Q+GS+D   VRF YSS+ + VP                           
Sbjct: 59  ELEEKRQKIYSQVGSQDISFVRFVYSSSNEVVPIVVKLKD-----------------QNK 101

Query: 511 NNSEVLDKPQTGSA------------------VSNEVVQEKTKLERRIKNKSLLSSRDVV 386
              E+ DKP+T SA                   +NE  Q + +++++ ++K  ++    +
Sbjct: 102 AKDEIKDKPRTSSASETSDKLPVEASTAADDQQTNE--QPRVQIDKKTEDKKKVTWNLKL 159

Query: 385 VKWRRSHXXXXXXXXXXXXXXXVYGKSFAILCTSIWWYLVPVMKQKELNSRKSMKKKDYG 206
            KWRR                  +G+S AILCTSI WY+VP +  K   S K  KKK   
Sbjct: 160 NKWRRPSFYMPIFIILILLFLAFFGRSVAILCTSIGWYIVPTLSSKR-PSPKLAKKKQLV 218

Query: 205 RWLSENKMVAEGIKSPIVKS 146
           R LSE       I  P  KS
Sbjct: 219 RRLSEISPRTRNIDDPKGKS 238


>ref|XP_002301147.1| predicted protein [Populus trichocarpa] gi|222842873|gb|EEE80420.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score =  113 bits (282), Expect = 9e-23
 Identities = 89/260 (34%), Positives = 128/260 (49%), Gaps = 18/260 (6%)
 Frame = -3

Query: 871 MVKPFICGVGSFQEEEEEDDDPWSLSTARGTKSY---------------RSTXXXXXXXN 737
           M+  FICG  SFQ +E ED+ PW+  ++   +S                +S        N
Sbjct: 1   MLNSFICG--SFQNQELEDE-PWNSPSSTPKRSSPSATPKRSSPCATPRKSRKSSKNNKN 57

Query: 736 PYSNRGLDKFAMVLAELDEKRRKIYEQMGSEDAKLVRFGYSSTRDWVPXXXXXXXXXXXX 557
           PYS+RGLDKF+ +LAEL+EKR+KIY Q+G ED  +VRF YSS+ D +P            
Sbjct: 58  PYSSRGLDKFSALLAELEEKRQKIYTQIGPEDVSVVRFVYSSSNDCIPVIVKAKDQKQDK 117

Query: 556 XXXXXXXXXKPASTMNNS-EVLDK-PQTGSAVSNEVVQEKTKLERRIKNKSLLSSRDVVV 383
                    K     +NS EV+ K P    A + +  Q + + +++ + K    S   + 
Sbjct: 118 PRASRVDDVKDKPINHNSTEVVYKLPTQAPAETKQAEQPRLETDKKTEKKCFTWSIK-LN 176

Query: 382 KWRRSHXXXXXXXXXXXXXXXVYGKSFAILCTSIWWYLVPVMKQKELNSRKSMKKKDYGR 203
           +WRR +                +G+S AIL TS+ WY+VP      L+++K  KKK+  R
Sbjct: 177 RWRRPYYYMPVAIVLILLLLVFFGRSVAILWTSLGWYIVPT-----LSTKKPSKKKEDVR 231

Query: 202 WLSENKMV-AEGIKSPIVKS 146
            LSE KMV   G+ SP  KS
Sbjct: 232 RLSEPKMVNNHGVSSPKRKS 251


>ref|XP_003589063.1| hypothetical protein MTR_1g017990 [Medicago truncatula]
           gi|355478111|gb|AES59314.1| hypothetical protein
           MTR_1g017990 [Medicago truncatula]
          Length = 285

 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 78/253 (30%), Positives = 117/253 (46%), Gaps = 3/253 (1%)
 Frame = -3

Query: 871 MVKPFICGVGSFQEEEEEDDDPWSLSTARGTKSYRSTXXXXXXXNPYSNRGLDKFAMVLA 692
           M+ PF+CG  +F +E+E++     L  A    S R         NPYS RGLDKF+ +L+
Sbjct: 1   MLNPFVCG--TFNQEDEDE-----LCRANPDSSPRRYKRKDSKNNPYSTRGLDKFSALLS 53

Query: 691 ELDEKRRKIYEQMGSEDAKLVRFGYSSTRDWVPXXXXXXXXXXXXXXXXXXXXXKPASTM 512
           +L++KR+KIY QM   D   VRF +S+  D+VP                      P ST+
Sbjct: 54  DLNDKRQKIYSQMNPHDISFVRFVHSNKDDFVPIVVKVKNKSQELKVVKPRNLS-PKSTV 112

Query: 511 NNSEVLDKPQTGSAVSNEVVQEKTKLERRIKNKSLLSSRDVVVKWRRSHXXXXXXXXXXX 332
             S     P++      E  Q K ++   +KN  +           +             
Sbjct: 113 KKSS----PESSIVAMEERNQPKKRISWNMKNNEM----------EKPLFYLPFVVIMIL 158

Query: 331 XXXXVYGKSFAILCTSIWWYLVPVMKQKELNSRKSMKKKDYGRWLSENKMVA---EGIKS 161
               V+G++ AI+ T I WY++P +K  ++ +R S+KKKD+ R LSE KM     EG+  
Sbjct: 159 VLLTVFGRTAAIIFTCILWYVIPTLK--DIKARNSIKKKDFVRGLSEKKMDVMNNEGVVK 216

Query: 160 PIVKSFRRGHSNK 122
              K + RG S K
Sbjct: 217 K--KDYVRGFSEK 227


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