BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008509
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_005090486.1| ribosomal protein S4 (mitochondrion) [Lotus ...    56   7e-06
ref|YP_005090450.1| ribosomal protein S4 (mitochondrion) [Millet...    56   7e-06
dbj|BAD83538.2| ribosomal protein S4, partial (mitochondrion) [N...    56   7e-06
ref|YP_003587235.1| ribosomal protein S4 [Citrullus lanatus] gi|...    56   7e-06
ref|YP_002000578.1| ribosomal protein S4 [Oryza sativa Japonica ...    56   7e-06

>ref|YP_005090486.1| ribosomal protein S4 (mitochondrion) [Lotus japonicus]
           gi|357197350|gb|AET62946.1| ribosomal protein S4
           (mitochondrion) [Lotus japonicus]
          Length = 358

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = +1

Query: 208 ELPTHYLEANYRTMKAVMFYAPNIAHIP 291
           ELPTHYLE NYRT+KAV+FY PNI HIP
Sbjct: 309 ELPTHYLEVNYRTLKAVVFYGPNIGHIP 336


>ref|YP_005090450.1| ribosomal protein S4 (mitochondrion) [Millettia pinnata]
           gi|372450274|ref|YP_005090457.1| ribosomal protein S4
           (mitochondrion) [Millettia pinnata]
           gi|357197313|gb|AET62910.1| ribosomal protein S4
           (mitochondrion) [Millettia pinnata]
           gi|357197320|gb|AET62917.1| ribosomal protein S4
           (mitochondrion) [Millettia pinnata]
          Length = 358

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = +1

Query: 208 ELPTHYLEANYRTMKAVMFYAPNIAHIP 291
           ELPTHYLE NYRT+KAV+FY PNI HIP
Sbjct: 309 ELPTHYLEVNYRTLKAVVFYGPNIGHIP 336


>dbj|BAD83538.2| ribosomal protein S4, partial (mitochondrion) [Nicotiana tabacum]
          Length = 349

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = +1

Query: 208 ELPTHYLEANYRTMKAVMFYAPNIAHIP 291
           ELPTHYLE NYRT+KAV+FY PNI HIP
Sbjct: 300 ELPTHYLEVNYRTLKAVVFYGPNIGHIP 327


>ref|YP_003587235.1| ribosomal protein S4 [Citrullus lanatus]
           gi|259156791|gb|ACV96653.1| ribosomal protein S4
           [Citrullus lanatus]
          Length = 355

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = +1

Query: 208 ELPTHYLEANYRTMKAVMFYAPNIAHIP 291
           ELPTHYLE NYRT+KAV+FY PNI HIP
Sbjct: 306 ELPTHYLEVNYRTLKAVVFYGPNIGHIP 333


>ref|YP_002000578.1| ribosomal protein S4 [Oryza sativa Japonica Group]
           gi|92700092|dbj|BAC19883.2| Ribosomal protein S4 [Oryza
           sativa Japonica Group]
          Length = 352

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = +1

Query: 208 ELPTHYLEANYRTMKAVMFYAPNIAHIP 291
           ELPTHYLE NYRT+KAV+FY PNI HIP
Sbjct: 303 ELPTHYLEVNYRTLKAVVFYGPNIGHIP 330