BLASTX nr result

ID: Coptis21_contig00008508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008508
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522001.1| conserved hypothetical protein [Ricinus comm...   159   3e-37
ref|XP_002319663.1| chromatin remodeling complex subunit [Populu...   157   6e-37
ref|XP_004152865.1| PREDICTED: uncharacterized protein LOC101218...   156   2e-36
ref|XP_002263799.2| PREDICTED: uncharacterized protein LOC100244...   155   4e-36
emb|CBI22318.3| unnamed protein product [Vitis vinifera]              155   4e-36

>ref|XP_002522001.1| conserved hypothetical protein [Ricinus communis]
           gi|223538805|gb|EEF40405.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1447

 Score =  159 bits (401), Expect = 3e-37
 Identities = 78/93 (83%), Positives = 83/93 (89%)
 Frame = +1

Query: 1   GSVPEGASMEVEGDATKGYIVNVVREKDEEAVSIPPSISAKLKPHQIAGIRFMWEYIIQC 180
           G++PEGAS EV GDA  GYIVNVVREK EEAV IPPSISAKLK HQ+AGIRFMWE I+Q 
Sbjct: 625 GNLPEGASFEVLGDAATGYIVNVVREKGEEAVRIPPSISAKLKAHQVAGIRFMWENIVQS 684

Query: 181 VRKVKSGDRGLGCILAHTMGLGKTFQVIAFLYT 279
           + KVKSGDRGLGCILAHTMGLGKTFQVIAFLYT
Sbjct: 685 IGKVKSGDRGLGCILAHTMGLGKTFQVIAFLYT 717


>ref|XP_002319663.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222858039|gb|EEE95586.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1404

 Score =  157 bits (398), Expect = 6e-37
 Identities = 76/93 (81%), Positives = 84/93 (90%)
 Frame = +1

Query: 1   GSVPEGASMEVEGDATKGYIVNVVREKDEEAVSIPPSISAKLKPHQIAGIRFMWEYIIQC 180
           G++PEGAS+EV GDAT GYIVNV REK EEAV IPPS+S+KLK HQ+AGIRF+WE IIQ 
Sbjct: 588 GNLPEGASVEVIGDATTGYIVNVAREKGEEAVRIPPSLSSKLKAHQVAGIRFLWENIIQS 647

Query: 181 VRKVKSGDRGLGCILAHTMGLGKTFQVIAFLYT 279
           +RKVKSGD GLGCILAHTMGLGKTFQVIAFLYT
Sbjct: 648 IRKVKSGDNGLGCILAHTMGLGKTFQVIAFLYT 680


>ref|XP_004152865.1| PREDICTED: uncharacterized protein LOC101218346 [Cucumis sativus]
          Length = 1628

 Score =  156 bits (394), Expect = 2e-36
 Identities = 76/93 (81%), Positives = 85/93 (91%)
 Frame = +1

Query: 1    GSVPEGASMEVEGDATKGYIVNVVREKDEEAVSIPPSISAKLKPHQIAGIRFMWEYIIQC 180
            G++ EGAS+EV GDA+ GYIVNVVREK EEA+ IPPSIS+KLK HQI+GIRFMWE IIQ 
Sbjct: 818  GNLSEGASVEVLGDASTGYIVNVVREKGEEAIRIPPSISSKLKTHQISGIRFMWENIIQS 877

Query: 181  VRKVKSGDRGLGCILAHTMGLGKTFQVIAFLYT 279
            +RKVKSGD+GLGCILAHTMGLGKTFQVIAFLYT
Sbjct: 878  IRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 910


>ref|XP_002263799.2| PREDICTED: uncharacterized protein LOC100244360 [Vitis vinifera]
          Length = 1507

 Score =  155 bits (391), Expect = 4e-36
 Identities = 77/93 (82%), Positives = 83/93 (89%)
 Frame = +1

Query: 1   GSVPEGASMEVEGDATKGYIVNVVREKDEEAVSIPPSISAKLKPHQIAGIRFMWEYIIQC 180
           G++ E  S+EV GDA+KGYIVNVVREK EEAV IPPSISAKLK HQI GIRFMWE IIQ 
Sbjct: 692 GNLSEDTSVEVLGDASKGYIVNVVREKGEEAVRIPPSISAKLKVHQITGIRFMWENIIQS 751

Query: 181 VRKVKSGDRGLGCILAHTMGLGKTFQVIAFLYT 279
           +RKVKSGD+GLGCILAHTMGLGKTFQVIAFLYT
Sbjct: 752 IRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 784


>emb|CBI22318.3| unnamed protein product [Vitis vinifera]
          Length = 1477

 Score =  155 bits (391), Expect = 4e-36
 Identities = 77/93 (82%), Positives = 83/93 (89%)
 Frame = +1

Query: 1   GSVPEGASMEVEGDATKGYIVNVVREKDEEAVSIPPSISAKLKPHQIAGIRFMWEYIIQC 180
           G++ E  S+EV GDA+KGYIVNVVREK EEAV IPPSISAKLK HQI GIRFMWE IIQ 
Sbjct: 664 GNLSEDTSVEVLGDASKGYIVNVVREKGEEAVRIPPSISAKLKVHQITGIRFMWENIIQS 723

Query: 181 VRKVKSGDRGLGCILAHTMGLGKTFQVIAFLYT 279
           +RKVKSGD+GLGCILAHTMGLGKTFQVIAFLYT
Sbjct: 724 IRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 756


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