BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008506
         (2092 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526000.1| cleavage and polyadenylation specificity fac...   192   3e-46
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261...   146   2e-32
emb|CBI26830.3| unnamed protein product [Vitis vinifera]              146   2e-32
ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   145   3e-32
emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera]   144   7e-32

>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223534732|gb|EEF36424.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 963

 Score =  192 bits (488), Expect = 3e-46
 Identities = 118/316 (37%), Positives = 152/316 (48%), Gaps = 3/316 (0%)
 Frame = +3

Query: 255  SEERVPLLRPRGDVRPXXXXXXXXXXXXXXXXXPSNMVRETAAVQLEERRADWGYSKPVV 434
            SE   PLL PR +  P                 PS +VRETAA++LEERRADWGYSKPVV
Sbjct: 609  SESHAPLLHPRQEA-PRAASLAMLLGRVTGRRGPSMLVRETAALELEERRADWGYSKPVV 667

Query: 435  ALDIAWNLAFTVVSIVMLSSTLGERPNTPIRVWIGGYALQCVIHXXXXXXXXXXXXXXXX 614
            ALD+ WN AF VVSI ML  ++ E+PNTPIR+WI GYALQC++H                
Sbjct: 668  ALDMVWNTAFVVVSITMLILSVKEKPNTPIRIWICGYALQCLVHVVLVWIEYRRRNSRRV 727

Query: 615  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAHTSFSANTGNRSSIAKRCES 794
                                                     ++ S+      S+      
Sbjct: 728  RDEERQQQQQQQAEVEGQHEENEGENVDSEDEDGVDRASVTSNRSSVIKRCESVNTMASF 787

Query: 795  INTMASFFWWIVGFYWIVSGGDILLHSAPRLYWLXXXXXXXXXXXXXXCVALACMXXXXX 974
            +  +  F+W       +VSGGD LL +AP LYWL              CV LAC+     
Sbjct: 788  LWWIVGFYW-------VVSGGDELLQNAPHLYWLAVVFLAFDVFFAIFCVVLACLIGIAL 840

Query: 975  XXXXXXXXXVLYAVAGQEGATESDLSILRKYNYKVFTDGEKSTGGAGRMVPVH---GELA 1145
                     +LYAVAGQEGA+E+DLSIL KY +++  + EK + GAG+MVP+    G LA
Sbjct: 841  CCCLPCIIAILYAVAGQEGASEADLSILPKYRFQLTVEEEKPSVGAGKMVPIETSSGYLA 900

Query: 1146 DTHVLLPEDAMSLVLL 1193
            +  +LLPEDA   + L
Sbjct: 901  NERILLPEDAECCICL 916


>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
          Length = 2299

 Score =  146 bits (368), Expect = 2e-32
 Identities = 78/159 (49%), Positives = 99/159 (62%), Gaps = 4/159 (2%)
 Frame = +3

Query: 729  DAHTSFSANTG-NRSSIAKRCESINTMASFFWWIVGFYWIVSGGDILLHSAPRLYWLXXX 905
            D   + SA+ G N+SS+ KRCES+NTMASF WWIVGFYW+VSGG+ LL +APRLYWL   
Sbjct: 2095 DEDGNSSASGGFNQSSVTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYWLAVV 2154

Query: 906  XXXXXXXXXXXCVALACMXXXXXXXXXXXXXXVLYAVAGQEGATESDLSILRKYNYKVFT 1085
                       CV LAC+              +LYAVAGQEGA+E+DLS+L +Y ++   
Sbjct: 2155 FLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPRYRFEA-N 2213

Query: 1086 DGEKSTGGAGRMVPVH---GELADTHVLLPEDAMSLVLL 1193
            + EKS  GAG M+P     G LA+  +LLPEDA   + L
Sbjct: 2214 NEEKSGVGAGTMIPTETSSGYLANERILLPEDAECCICL 2252



 Score =  115 bits (287), Expect = 6e-23
 Identities = 62/116 (53%), Positives = 74/116 (63%), Gaps = 3/116 (2%)
 Frame = +3

Query: 228  MAEQQQSIGSEERVPLLRPR---GDVRPXXXXXXXXXXXXXXXXXPSNMVRETAAVQLEE 398
            M+E   + G+    PLLRPR    +                    PS +VRETAA +LEE
Sbjct: 1945 MSETSTTTGTT--APLLRPRQGTAEQSARPTTLALLMGRATGRRGPSMLVRETAARELEE 2002

Query: 399  RRADWGYSKPVVALDIAWNLAFTVVSIVMLSSTLGERPNTPIRVWIGGYALQCVIH 566
            RRADWGYSKPVVALD+ WN++F +VSIVML  T  ERPNTPIR+WI GYALQC +H
Sbjct: 2003 RRADWGYSKPVVALDMMWNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGVH 2058


>emb|CBI26830.3| unnamed protein product [Vitis vinifera]
          Length = 313

 Score =  146 bits (368), Expect = 2e-32
 Identities = 78/159 (49%), Positives = 99/159 (62%), Gaps = 4/159 (2%)
 Frame = +3

Query: 729  DAHTSFSANTG-NRSSIAKRCESINTMASFFWWIVGFYWIVSGGDILLHSAPRLYWLXXX 905
            D   + SA+ G N+SS+ KRCES+NTMASF WWIVGFYW+VSGG+ LL +APRLYWL   
Sbjct: 65   DEDGNSSASGGFNQSSVTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYWLAVV 124

Query: 906  XXXXXXXXXXXCVALACMXXXXXXXXXXXXXXVLYAVAGQEGATESDLSILRKYNYKVFT 1085
                       CV LAC+              +LYAVAGQEGA+E+DLS+L +Y ++   
Sbjct: 125  FLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPRYRFEA-N 183

Query: 1086 DGEKSTGGAGRMVPVH---GELADTHVLLPEDAMSLVLL 1193
            + EKS  GAG M+P     G LA+  +LLPEDA   + L
Sbjct: 184  NEEKSGVGAGTMIPTETSSGYLANERILLPEDAECCICL 222


>ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
          Length = 357

 Score =  145 bits (367), Expect = 3e-32
 Identities = 76/152 (50%), Positives = 93/152 (61%), Gaps = 3/152 (1%)
 Frame = +3

Query: 747  SANTGNRSSIAKRCESINTMASFFWWIVGFYWIVSGGDILLHSAPRLYWLXXXXXXXXXX 926
            S NT +RS  AKRCES+NT  SF WWIVGFYW+VSGGDILL  APRLYWL          
Sbjct: 160  SGNT-SRSRFAKRCESLNTGVSFLWWIVGFYWVVSGGDILLQDAPRLYWLAVVFLAFDVF 218

Query: 927  XXXXCVALACMXXXXXXXXXXXXXXVLYAVAGQEGATESDLSILRKYNYKVFTDGEKSTG 1106
                CV LAC+              +LYAVAGQEGA+E+DLS+L KY +++ +D +K +G
Sbjct: 219  FAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPKYKFRILSDVDKPSG 278

Query: 1107 GAGRMVPVH---GELADTHVLLPEDAMSLVLL 1193
            GAG MVP+      L +   LL EDA   + L
Sbjct: 279  GAGSMVPIETSSAYLENERTLLLEDAECCICL 310



 Score =  117 bits (293), Expect = 1e-23
 Identities = 59/103 (57%), Positives = 67/103 (65%)
 Frame = +3

Query: 258 EERVPLLRPRGDVRPXXXXXXXXXXXXXXXXXPSNMVRETAAVQLEERRADWGYSKPVVA 437
           E   PLLR R D                    PS +VRETAA +LEERRADWGYSKPVVA
Sbjct: 12  EPYTPLLRSRTDAGRGPAPALALLLGRAGRRGPSMLVRETAARELEERRADWGYSKPVVA 71

Query: 438 LDIAWNLAFTVVSIVMLSSTLGERPNTPIRVWIGGYALQCVIH 566
           LD++WN+AF VVS  ML+ T  E P TPIRVWI GYALQC++H
Sbjct: 72  LDMSWNMAFVVVSAAMLACTTSEHPTTPIRVWIVGYALQCLVH 114


>emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera]
          Length = 361

 Score =  144 bits (364), Expect = 7e-32
 Identities = 78/159 (49%), Positives = 98/159 (61%), Gaps = 4/159 (2%)
 Frame = +3

Query: 729  DAHTSFSANTG-NRSSIAKRCESINTMASFFWWIVGFYWIVSGGDILLHSAPRLYWLXXX 905
            D   + SA+ G N+SS+ KRCES+NTMASF WWIVGFYW+VSGG+ LL +APRLYWL   
Sbjct: 151  DEDGNSSASGGFNQSSVTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYWLAVV 210

Query: 906  XXXXXXXXXXXCVALACMXXXXXXXXXXXXXXVLYAVAGQEGATESDLSILRKYNYKVFT 1085
                       CV LAC+              +LYAVAGQEGA+E+DLS+L +Y ++   
Sbjct: 211  FLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPRYRFEA-N 269

Query: 1086 DGEKSTGGAGRMVPVH---GELADTHVLLPEDAMSLVLL 1193
            + EKS  GAG M P     G LA+  +LLPEDA   + L
Sbjct: 270  NEEKSGVGAGTMFPTETSSGYLANERILLPEDAECCICL 308



 Score =  115 bits (287), Expect = 6e-23
 Identities = 62/116 (53%), Positives = 74/116 (63%), Gaps = 3/116 (2%)
 Frame = +3

Query: 228 MAEQQQSIGSEERVPLLRPR---GDVRPXXXXXXXXXXXXXXXXXPSNMVRETAAVQLEE 398
           M+E   + G+    PLLRPR    +                    PS +VRETAA +LEE
Sbjct: 1   MSETSTTTGTT--APLLRPRQGTAEQSARPTTLALLMGRATGRRGPSMLVRETAARELEE 58

Query: 399 RRADWGYSKPVVALDIAWNLAFTVVSIVMLSSTLGERPNTPIRVWIGGYALQCVIH 566
           RRADWGYSKPVVALD+ WN++F +VSIVML  T  ERPNTPIR+WI GYALQC +H
Sbjct: 59  RRADWGYSKPVVALDMMWNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGVH 114