BLASTX nr result

ID: Coptis21_contig00008501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008501
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_190196.1| Histidyl-tRNA synthetase 1 [Arabidopsis thalian...    57   1e-06
ref|XP_002877454.1| histidyl-tRNA synthetase 1 [Arabidopsis lyra...    57   1e-06
ref|XP_002871031.1| histidyl-tRNA synthetase 1 [Arabidopsis lyra...    57   1e-06
ref|XP_002519492.1| histidyl-tRNA synthetase, putative [Ricinus ...    57   1e-06
emb|CBI32776.3| unnamed protein product [Vitis vinifera]               57   2e-06

>ref|NP_190196.1| Histidyl-tRNA synthetase 1 [Arabidopsis thaliana]
           gi|3659909|gb|AAC61600.1| histidyl-tRNA synthetase
           [Arabidopsis thaliana] gi|7798998|emb|CAB90937.1|
           histidyl-tRNA synthetase [Arabidopsis thaliana]
           gi|15810389|gb|AAL07082.1| putative histidyl-tRNA
           synthetase [Arabidopsis thaliana]
           gi|21436315|gb|AAM51327.1| putative histidyl-tRNA
           synthetase [Arabidopsis thaliana]
           gi|332644592|gb|AEE78113.1| Histidyl-tRNA synthetase 1
           [Arabidopsis thaliana]
          Length = 486

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/31 (90%), Positives = 31/31 (100%)
 Frame = +1

Query: 334 AEAELISSIVTFFKRLGITSSDVGFRVSSRK 426
           AEAELISSIVTFFKR+GIT+SDVGF+VSSRK
Sbjct: 201 AEAELISSIVTFFKRIGITASDVGFKVSSRK 231


>ref|XP_002877454.1| histidyl-tRNA synthetase 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297323292|gb|EFH53713.1| histidyl-tRNA synthetase 1
           [Arabidopsis lyrata subsp. lyrata]
          Length = 442

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/31 (90%), Positives = 31/31 (100%)
 Frame = +1

Query: 334 AEAELISSIVTFFKRLGITSSDVGFRVSSRK 426
           AEAELISSIVTFFKR+GIT+SDVGF+VSSRK
Sbjct: 201 AEAELISSIVTFFKRIGITASDVGFKVSSRK 231


>ref|XP_002871031.1| histidyl-tRNA synthetase 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297316868|gb|EFH47290.1| histidyl-tRNA synthetase 1
           [Arabidopsis lyrata subsp. lyrata]
          Length = 486

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/31 (90%), Positives = 31/31 (100%)
 Frame = +1

Query: 334 AEAELISSIVTFFKRLGITSSDVGFRVSSRK 426
           AEAELISSIVTFFKR+GIT+SDVGF+VSSRK
Sbjct: 201 AEAELISSIVTFFKRIGITASDVGFKVSSRK 231


>ref|XP_002519492.1| histidyl-tRNA synthetase, putative [Ricinus communis]
           gi|223541355|gb|EEF42906.1| histidyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 503

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/31 (90%), Positives = 31/31 (100%)
 Frame = +1

Query: 334 AEAELISSIVTFFKRLGITSSDVGFRVSSRK 426
           AEAELISSIVTFFKR+GIT+SDVGF+VSSRK
Sbjct: 218 AEAELISSIVTFFKRIGITASDVGFKVSSRK 248


>emb|CBI32776.3| unnamed protein product [Vitis vinifera]
          Length = 404

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/31 (90%), Positives = 31/31 (100%)
 Frame = +1

Query: 334 AEAELISSIVTFFKRLGITSSDVGFRVSSRK 426
           AEAELISSIVTFFKR+GIT+SDVGF+VSSRK
Sbjct: 119 AEAELISSIVTFFKRVGITASDVGFKVSSRK 149


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