BLASTX nr result

ID: Coptis21_contig00008456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008456
         (1814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68957.1| hypothetical protein VITISV_015733 [Vitis vinifera]   373   e-100
ref|XP_002281753.1| PREDICTED: uncharacterized protein LOC100249...   361   4e-97
ref|XP_002517598.1| racemase and epimerase, acting on amino acid...   350   5e-94
emb|CBI36279.3| unnamed protein product [Vitis vinifera]              347   5e-93
ref|XP_002303258.1| predicted protein [Populus trichocarpa] gi|2...   344   5e-92

>emb|CAN68957.1| hypothetical protein VITISV_015733 [Vitis vinifera]
          Length = 330

 Score =  373 bits (957), Expect = e-100
 Identities = 197/326 (60%), Positives = 246/326 (75%), Gaps = 2/326 (0%)
 Frame = -2

Query: 1186 MSLQTLICPSQFLGCTTKYTVAYEVSLKPTFSIQLSSHLRQTNTGSGDSPIYKKCHISCS 1007
            MS  +L  PS  +G   K+ +       P  ++  SS L QT+  SG+ P  K    S +
Sbjct: 3    MSFHSLKYPSHMMGNVHKHXILXRTMKNPILAVPPSSTLLQTDE-SGNLPESKNSSGSDA 61

Query: 1006 ALRNSQKTSL-LGGANTIGIIGGVSAVSTLNFLEKLLRWTS-NGEETLPFVVCSDPLLSK 833
            A  NS   SL +  A T+GIIGGVS  STLNFL+KL++W+S +G ++LPFV+CSDP+L+K
Sbjct: 62   ASTNSDSASLFINQATTVGIIGGVSVDSTLNFLKKLVQWSSKDGGDSLPFVLCSDPVLNK 121

Query: 832  KLLFHERSSFSILNTKQSHTQLDPTPILENLRRKVTFLEEAGARCIVMPCNVSHVWHDEI 653
            +LL HERS F +L+TK+  +++D TPI+ NL+ K  FLE +G +CIVMPC++SH WHDEI
Sbjct: 122  QLLSHERSHFPLLSTKRESSRMDHTPIVGNLQSKRAFLERSGVQCIVMPCHISHSWHDEI 181

Query: 652  SKGCSLPFLHVGECVAKELKEANLKTLEAGGSLSIGVLAGHATLKAGFYQEKLQNEGFEV 473
            S+G S+PFLH+GECVA+ELK A LK LEAG  L IGVLA +ATL AGFYQEKLQ EGFEV
Sbjct: 182  SRGXSVPFLHMGECVARELKNAKLKPLEAGSPLRIGVLATNATLTAGFYQEKLQREGFEV 241

Query: 472  VLPDKATMEHTVIPAMEALNREDIKGAKNLFRIALQVLLVRDVKTVILACDDMLDLFTRN 293
            VLPDKATMEHTVIPA+EALNR+D++GA+NL RIALQVLLVR V TVILA DDM DL  R+
Sbjct: 242  VLPDKATMEHTVIPAIEALNRKDMEGARNLLRIALQVLLVRAVNTVILASDDMHDLLPRD 301

Query: 292  DLLPKRCIDPMDALARSTINWGKSCE 215
            D L K+C+DPMDALARSTI+W +S E
Sbjct: 302  DPLLKKCVDPMDALARSTIHWAQSVE 327


>ref|XP_002281753.1| PREDICTED: uncharacterized protein LOC100249822 [Vitis vinifera]
          Length = 305

 Score =  361 bits (926), Expect = 4e-97
 Identities = 189/298 (63%), Positives = 234/298 (78%), Gaps = 2/298 (0%)
 Frame = -2

Query: 1102 PTFSIQLSSHLRQTNTGSGDSPIYKKCHISCSALRNSQKTSL-LGGANTIGIIGGVSAVS 926
            P  ++  SS L QT+  SG+ P  K    S +A  NS   SL +  A T+GIIGGVS  S
Sbjct: 4    PILAVPPSSTLLQTDE-SGNLPESKNSSGSDAASTNSDSASLFINQATTVGIIGGVSVDS 62

Query: 925  TLNFLEKLLRWTS-NGEETLPFVVCSDPLLSKKLLFHERSSFSILNTKQSHTQLDPTPIL 749
            TLNFL+KL++W+S +G ++LPFV+CSDP+L+K+LL HERS F +L+TK+  +++D TPI+
Sbjct: 63   TLNFLKKLVQWSSKDGGDSLPFVLCSDPVLNKQLLSHERSHFPLLSTKRESSRMDHTPIV 122

Query: 748  ENLRRKVTFLEEAGARCIVMPCNVSHVWHDEISKGCSLPFLHVGECVAKELKEANLKTLE 569
             NL+ K  FLE +G +CIVMPC++SH WHDEIS+G S+PFLH+GECVA+ELK A LK LE
Sbjct: 123  GNLQSKRAFLERSGVQCIVMPCHISHSWHDEISRGSSVPFLHMGECVARELKNAKLKPLE 182

Query: 568  AGGSLSIGVLAGHATLKAGFYQEKLQNEGFEVVLPDKATMEHTVIPAMEALNREDIKGAK 389
            AG  L IGVLA +ATL AGFYQEKLQ EGFEVVLPDKATMEHTVIPA+EA NR+D++GA+
Sbjct: 183  AGSPLRIGVLATNATLTAGFYQEKLQREGFEVVLPDKATMEHTVIPAIEAFNRKDMEGAR 242

Query: 388  NLFRIALQVLLVRDVKTVILACDDMLDLFTRNDLLPKRCIDPMDALARSTINWGKSCE 215
            NL RIALQVLLVR V TVILA DDM DL  R+D L K+C+DPMDALARSTI+W +S E
Sbjct: 243  NLLRIALQVLLVRAVNTVILASDDMHDLLPRDDPLLKKCVDPMDALARSTIHWAQSVE 300


>ref|XP_002517598.1| racemase and epimerase, acting on amino acids and derivatives,
            putative [Ricinus communis] gi|223543230|gb|EEF44762.1|
            racemase and epimerase, acting on amino acids and
            derivatives, putative [Ricinus communis]
          Length = 330

 Score =  350 bits (899), Expect = 5e-94
 Identities = 187/332 (56%), Positives = 237/332 (71%), Gaps = 1/332 (0%)
 Frame = -2

Query: 1207 MFEASTRMSLQTLICPSQFLGCTTKYTVAYEVSLKPTFSIQLSSHLRQTNTGSGDSPIYK 1028
            MF+ S  MS  +L  PS        +  +Y+       ++  SS +  T+  SG     K
Sbjct: 1    MFDGSLIMSFHSLNYPSHRFNNVNTHKTSYKARSNLVQAVPPSSVILHTDE-SGRFRGSK 59

Query: 1027 KCHISCSALRNSQKTSLLGGANTIGIIGGVSAVSTLNFLEKLLRWTS-NGEETLPFVVCS 851
            K   S S         LL  ANT+GIIGG S    LNFL+KL++W+S +G+++LPFV+CS
Sbjct: 60   KSSGSTS----DSSDLLLNQANTVGIIGGTSVNCALNFLKKLVQWSSEDGKDSLPFVLCS 115

Query: 850  DPLLSKKLLFHERSSFSILNTKQSHTQLDPTPILENLRRKVTFLEEAGARCIVMPCNVSH 671
            DP+L+K+LL HER  F  +  ++ +++LD   I+ENLR K  FLE +GARCIVMPC++SH
Sbjct: 116  DPVLNKELLSHERDFFPSIGRQKEYSKLDHAQIVENLRSKRVFLERSGARCIVMPCHISH 175

Query: 670  VWHDEISKGCSLPFLHVGECVAKELKEANLKTLEAGGSLSIGVLAGHATLKAGFYQEKLQ 491
             WH+++SKGCS+ FLH+GECVA+ELKEA LK LEAG  L IGVLA +ATL AGFYQEKLQ
Sbjct: 176  SWHEQVSKGCSIHFLHMGECVARELKEAKLKPLEAGSPLRIGVLAANATLTAGFYQEKLQ 235

Query: 490  NEGFEVVLPDKATMEHTVIPAMEALNREDIKGAKNLFRIALQVLLVRDVKTVILACDDML 311
            +EGFEVVLPDKATMEHT+IPA+ ALNR+D++GA+NL RIALQVLLVR V TVILA DDM 
Sbjct: 236  SEGFEVVLPDKATMEHTIIPAIGALNRKDMEGARNLLRIALQVLLVRAVNTVILASDDMR 295

Query: 310  DLFTRNDLLPKRCIDPMDALARSTINWGKSCE 215
            DL  +ND L K+CIDPMDAL R+TI W K+ E
Sbjct: 296  DLLPQNDPLLKKCIDPMDALVRATIKWAKAAE 327


>emb|CBI36279.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score =  347 bits (891), Expect = 5e-93
 Identities = 172/250 (68%), Positives = 211/250 (84%), Gaps = 1/250 (0%)
 Frame = -2

Query: 961 TIGIIGGVSAVSTLNFLEKLLRWTS-NGEETLPFVVCSDPLLSKKLLFHERSSFSILNTK 785
           T+GIIGGVS  STLNFL+KL++W+S +G ++LPFV+CSDP+L+K+LL HERS F +L+TK
Sbjct: 189 TVGIIGGVSVDSTLNFLKKLVQWSSKDGGDSLPFVLCSDPVLNKQLLSHERSHFPLLSTK 248

Query: 784 QSHTQLDPTPILENLRRKVTFLEEAGARCIVMPCNVSHVWHDEISKGCSLPFLHVGECVA 605
           +  +++D TPI+ NL+ K  FLE +G +CIVMPC++SH WHDEIS+G S+PFLH+GECVA
Sbjct: 249 RESSRMDHTPIVGNLQSKRAFLERSGVQCIVMPCHISHSWHDEISRGSSVPFLHMGECVA 308

Query: 604 KELKEANLKTLEAGGSLSIGVLAGHATLKAGFYQEKLQNEGFEVVLPDKATMEHTVIPAM 425
           +ELK A LK LEAG  L IGVLA +ATL AGFYQEKLQ EGFEVVLPDKATMEHTVIPA+
Sbjct: 309 RELKNAKLKPLEAGSPLRIGVLATNATLTAGFYQEKLQREGFEVVLPDKATMEHTVIPAI 368

Query: 424 EALNREDIKGAKNLFRIALQVLLVRDVKTVILACDDMLDLFTRNDLLPKRCIDPMDALAR 245
           EA NR+D++GA+NL RIALQVLLVR V TVILA DDM DL  R+D L K+C+DPMDALAR
Sbjct: 369 EAFNRKDMEGARNLLRIALQVLLVRAVNTVILASDDMHDLLPRDDPLLKKCVDPMDALAR 428

Query: 244 STINWGKSCE 215
           STI+W +S E
Sbjct: 429 STIHWAQSVE 438


>ref|XP_002303258.1| predicted protein [Populus trichocarpa] gi|222840690|gb|EEE78237.1|
            predicted protein [Populus trichocarpa]
          Length = 330

 Score =  344 bits (882), Expect = 5e-92
 Identities = 188/333 (56%), Positives = 236/333 (70%), Gaps = 2/333 (0%)
 Frame = -2

Query: 1207 MFEASTRMSLQTLICPSQFLGCTTKYTVAYEVSLKPTFSIQLSSHLRQTNTGSGDSPIYK 1028
            MF+ S  M   TL  P   LG    +   ++  L+P  +I  SS L  T+  SG  P  K
Sbjct: 1    MFDGSLAMPFHTLH-PCHLLGHVNTHRALHKSRLQPVLAIPPSSILLHTDE-SGKFPDSK 58

Query: 1027 KCHISCSALRNSQKT-SLLGGANTIGIIGGVSAVSTLNFLEKLLRWTSN-GEETLPFVVC 854
            K     S LR    + SLL  ANT+GIIGG+S  S LNFL+KL++ +S  G++  PFV+C
Sbjct: 59   KG----SGLRGRDSSDSLLSQANTVGIIGGISVNSALNFLKKLVQGSSKEGKDCFPFVLC 114

Query: 853  SDPLLSKKLLFHERSSFSILNTKQSHTQLDPTPILENLRRKVTFLEEAGARCIVMPCNVS 674
            SDP+L+K+LL HER+S          +  D + I ENL+ K  FLE++G +CIVMPC++ 
Sbjct: 115  SDPVLNKELLSHERNSCPCPRRHNEKSPSDHSAIAENLQNKRVFLEKSGVQCIVMPCHIL 174

Query: 673  HVWHDEISKGCSLPFLHVGECVAKELKEANLKTLEAGGSLSIGVLAGHATLKAGFYQEKL 494
            H WHDE+SKGCSLPFLH+GECVA+ELKEA LK LEAG  L IG+LA +ATL AGFYQEKL
Sbjct: 175  HSWHDEVSKGCSLPFLHMGECVARELKEAKLKPLEAGSPLRIGLLASNATLAAGFYQEKL 234

Query: 493  QNEGFEVVLPDKATMEHTVIPAMEALNREDIKGAKNLFRIALQVLLVRDVKTVILACDDM 314
            QNEGFEVVLPDKATMEHT+IPA+EAL+R D++GA+NL RIALQVLLVR V TVILA ++M
Sbjct: 235  QNEGFEVVLPDKATMEHTIIPAIEALDRNDMEGAQNLLRIALQVLLVRAVNTVILASEEM 294

Query: 313  LDLFTRNDLLPKRCIDPMDALARSTINWGKSCE 215
             D+   +D L K+CIDPMDALARSTI W ++ +
Sbjct: 295  RDVLPEDDPLLKKCIDPMDALARSTIKWAQAAD 327


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