BLASTX nr result

ID: Coptis21_contig00008264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008264
         (782 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299164.1| predicted protein [Populus trichocarpa] gi|2...   136   6e-30
ref|XP_002303969.1| predicted protein [Populus trichocarpa] gi|2...   135   8e-30
gb|ABK96444.1| unknown [Populus trichocarpa x Populus deltoides]      134   2e-29
ref|XP_002269716.1| PREDICTED: uncharacterized protein LOC100255...   129   9e-28
ref|XP_003543715.1| PREDICTED: uncharacterized protein LOC100804...   120   3e-25

>ref|XP_002299164.1| predicted protein [Populus trichocarpa] gi|222846422|gb|EEE83969.1|
           predicted protein [Populus trichocarpa]
          Length = 92

 Score =  136 bits (342), Expect = 6e-30
 Identities = 65/90 (72%), Positives = 78/90 (86%), Gaps = 1/90 (1%)
 Frame = +2

Query: 314 MEVLQKMVFPMRRVWFAVSARVKARKNGGGLLKLHDDVQTCEYQDVQVMWEMLRRTESEM 493
           M++  KM+FP+RRVW +VSARVKARKNG  LLKLH+DVQTC Y+DVQVMWE+LRR+ESE+
Sbjct: 1   MDLWHKMIFPVRRVWLSVSARVKARKNGANLLKLHNDVQTCGYEDVQVMWEILRRSESEL 60

Query: 494 MAQTPTKRKQKPFWRVFVWS-HNRSSSFGA 580
           MA  P KRKQ+PFWRVFVWS H+ +SSF A
Sbjct: 61  MASHP-KRKQRPFWRVFVWSNHSAASSFSA 89


>ref|XP_002303969.1| predicted protein [Populus trichocarpa] gi|222841401|gb|EEE78948.1|
           predicted protein [Populus trichocarpa]
          Length = 90

 Score =  135 bits (341), Expect = 8e-30
 Identities = 64/88 (72%), Positives = 78/88 (88%), Gaps = 1/88 (1%)
 Frame = +2

Query: 320 VLQKMVFPMRRVWFAVSARVKARKNGGGLLKLHDDVQTCEYQDVQVMWEMLRRTESEMMA 499
           +L KM+FP+RRVW AVSAR++ARKNG GLL+LH+DVQTC Y+DVQVMWE+LRR+ESE+MA
Sbjct: 1   MLHKMIFPVRRVWLAVSARLRARKNGAGLLELHNDVQTCGYEDVQVMWEILRRSESELMA 60

Query: 500 QTPTKRKQKPFWRVFVWS-HNRSSSFGA 580
             P KRKQ+PFWRVFVWS H+ +SSF A
Sbjct: 61  SLP-KRKQRPFWRVFVWSNHSAASSFSA 87


>gb|ABK96444.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 92

 Score =  134 bits (338), Expect = 2e-29
 Identities = 64/88 (72%), Positives = 77/88 (87%), Gaps = 1/88 (1%)
 Frame = +2

Query: 314 MEVLQKMVFPMRRVWFAVSARVKARKNGGGLLKLHDDVQTCEYQDVQVMWEMLRRTESEM 493
           M++  KM+FP+RRVW +VSARVKARKNG  LLKLH+DVQTC Y+DVQVMWE+LRR+ESE+
Sbjct: 1   MDLWHKMIFPVRRVWLSVSARVKARKNGANLLKLHNDVQTCGYEDVQVMWEILRRSESEL 60

Query: 494 MAQTPTKRKQKPFWRVFVWS-HNRSSSF 574
           MA  P KRKQ+PFWRVFVWS H+ +SSF
Sbjct: 61  MASHP-KRKQRPFWRVFVWSNHSAASSF 87


>ref|XP_002269716.1| PREDICTED: uncharacterized protein LOC100255236 [Vitis vinifera]
           gi|298204741|emb|CBI25239.3| unnamed protein product
           [Vitis vinifera]
          Length = 93

 Score =  129 bits (323), Expect = 9e-28
 Identities = 66/91 (72%), Positives = 73/91 (80%), Gaps = 2/91 (2%)
 Frame = +2

Query: 314 MEVLQKMVFPMRRVWFAVSARVKARKNGGGLLKLHDDVQTCEYQDVQVMWE-MLRRTESE 490
           ME+  KM+FP+RR W AVS+RVKARKNGGGLLKLHDDVQTCEY DV  MW  ML R+ESE
Sbjct: 1   MELWHKMIFPVRRAWLAVSSRVKARKNGGGLLKLHDDVQTCEYDDVHRMWNMMLSRSESE 60

Query: 491 MMAQTPTKRKQKPFWRVFVWS-HNRSSSFGA 580
             +Q  TKRK +PFWRVFVWS HN SSSF A
Sbjct: 61  HGSQ-HTKRKHRPFWRVFVWSNHNSSSSFSA 90


>ref|XP_003543715.1| PREDICTED: uncharacterized protein LOC100804925 [Glycine max]
          Length = 90

 Score =  120 bits (302), Expect = 3e-25
 Identities = 56/86 (65%), Positives = 69/86 (80%)
 Frame = +2

Query: 314 MEVLQKMVFPMRRVWFAVSARVKARKNGGGLLKLHDDVQTCEYQDVQVMWEMLRRTESEM 493
           ME+   M FP+RRVW ++SAR+K RKNG GLLKL DDVQTC YQDVQVMWEML+RTE E+
Sbjct: 1   MEIWANMFFPLRRVWLSLSARLKPRKNGAGLLKLQDDVQTCGYQDVQVMWEMLQRTEGEV 60

Query: 494 MAQTPTKRKQKPFWRVFVWSHNRSSS 571
           + +   KRKQ PFWR+FVWS++  S+
Sbjct: 61  I-ENHHKRKQFPFWRIFVWSNHTQSA 85


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