BLASTX nr result

ID: Coptis21_contig00008222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008222
         (744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003566193.1| PREDICTED: 40S ribosomal protein S15a-5-like...   219   5e-55
ref|NP_001046462.1| Os02g0255200 [Oryza sativa Japonica Group] g...   214   1e-53
ref|XP_002465156.1| hypothetical protein SORBIDRAFT_01g032870 [S...   214   2e-53
ref|XP_002281092.1| PREDICTED: 40S ribosomal protein S15a-5 [Vit...   212   6e-53
gb|AFW88085.1| putative ribosomal protein S8 family protein [Zea...   211   1e-52

>ref|XP_003566193.1| PREDICTED: 40S ribosomal protein S15a-5-like [Brachypodium
           distachyon]
          Length = 129

 Score =  219 bits (558), Expect = 5e-55
 Identities = 105/129 (81%), Positives = 120/129 (93%)
 Frame = +2

Query: 86  MGRRILNDALRTMVNAERRGKATANLQPVSNVIAAFLKIMKSRGYIKDYQVADMNRVGKI 265
           MGRRILNDALRTMVNAERRGKATA LQP+S V+ +FL IMK RGYIK+++V D +RVGKI
Sbjct: 1   MGRRILNDALRTMVNAERRGKATACLQPISGVMISFLNIMKHRGYIKNFEVFDPHRVGKI 60

Query: 266 TVELQGRIKDCRALTYRQDLKAKEIDEFKIRTLPTRQWGYVVITTPNGVLDHEEAKRQNV 445
           TVELQGRIKDC+ALTYRQDL++KEI++++IR LPTRQWGYVV+TTPNGVLDHEEA RQNV
Sbjct: 61  TVELQGRIKDCKALTYRQDLRSKEIEQYRIRMLPTRQWGYVVVTTPNGVLDHEEAIRQNV 120

Query: 446 GGQVLGYFH 472
           GGQVLGYFH
Sbjct: 121 GGQVLGYFH 129


>ref|NP_001046462.1| Os02g0255200 [Oryza sativa Japonica Group]
           gi|50251667|dbj|BAD29691.1| putative 40S ribosomal
           protein S15A [Oryza sativa Japonica Group]
           gi|113535993|dbj|BAF08376.1| Os02g0255200 [Oryza sativa
           Japonica Group] gi|125538846|gb|EAY85241.1| hypothetical
           protein OsI_06614 [Oryza sativa Indica Group]
           gi|125581523|gb|EAZ22454.1| hypothetical protein
           OsJ_06122 [Oryza sativa Japonica Group]
           gi|215768335|dbj|BAH00564.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 129

 Score =  214 bits (546), Expect = 1e-53
 Identities = 102/129 (79%), Positives = 117/129 (90%)
 Frame = +2

Query: 86  MGRRILNDALRTMVNAERRGKATANLQPVSNVIAAFLKIMKSRGYIKDYQVADMNRVGKI 265
           MGRRILNDALRTMVNAERRGKATA LQP+S V+ +FL IMK RGYIK ++V D +RVGKI
Sbjct: 1   MGRRILNDALRTMVNAERRGKATALLQPISGVMVSFLNIMKHRGYIKKFEVIDPHRVGKI 60

Query: 266 TVELQGRIKDCRALTYRQDLKAKEIDEFKIRTLPTRQWGYVVITTPNGVLDHEEAKRQNV 445
            VEL GRIKDC+ALTYRQD++AKEI+++++R LPTRQWGYVVITTPNGVLDHEEA +QNV
Sbjct: 61  NVELHGRIKDCKALTYRQDIRAKEIEQYRVRMLPTRQWGYVVITTPNGVLDHEEAIKQNV 120

Query: 446 GGQVLGYFH 472
           GGQVLGYFH
Sbjct: 121 GGQVLGYFH 129


>ref|XP_002465156.1| hypothetical protein SORBIDRAFT_01g032870 [Sorghum bicolor]
           gi|241919010|gb|EER92154.1| hypothetical protein
           SORBIDRAFT_01g032870 [Sorghum bicolor]
          Length = 129

 Score =  214 bits (545), Expect = 2e-53
 Identities = 102/129 (79%), Positives = 117/129 (90%)
 Frame = +2

Query: 86  MGRRILNDALRTMVNAERRGKATANLQPVSNVIAAFLKIMKSRGYIKDYQVADMNRVGKI 265
           MGRRILNDALRTMVNA+RRG ATA LQP+S V+ +FL IMK RGYIK+++V D +RVGKI
Sbjct: 1   MGRRILNDALRTMVNADRRGNATALLQPISGVMVSFLNIMKHRGYIKNFEVIDPHRVGKI 60

Query: 266 TVELQGRIKDCRALTYRQDLKAKEIDEFKIRTLPTRQWGYVVITTPNGVLDHEEAKRQNV 445
            VEL GRIKDC+ALTYRQDL+AKEI+++++R LPTRQWGYVVITTPNGVLDHEEA RQNV
Sbjct: 61  NVELHGRIKDCKALTYRQDLRAKEIEQYRVRMLPTRQWGYVVITTPNGVLDHEEAIRQNV 120

Query: 446 GGQVLGYFH 472
           GGQVLGYFH
Sbjct: 121 GGQVLGYFH 129


>ref|XP_002281092.1| PREDICTED: 40S ribosomal protein S15a-5 [Vitis vinifera]
           gi|147768437|emb|CAN69268.1| hypothetical protein
           VITISV_043644 [Vitis vinifera]
           gi|297743113|emb|CBI35980.3| unnamed protein product
           [Vitis vinifera]
          Length = 129

 Score =  212 bits (540), Expect = 6e-53
 Identities = 103/129 (79%), Positives = 115/129 (89%)
 Frame = +2

Query: 86  MGRRILNDALRTMVNAERRGKATANLQPVSNVIAAFLKIMKSRGYIKDYQVADMNRVGKI 265
           MGRRILNDALRTMVNAERRG A A+LQP+S V+ +FLKIMK  GYIKD+QV D +RVGKI
Sbjct: 1   MGRRILNDALRTMVNAERRGMAKAHLQPISTVMTSFLKIMKDHGYIKDFQVYDPHRVGKI 60

Query: 266 TVELQGRIKDCRALTYRQDLKAKEIDEFKIRTLPTRQWGYVVITTPNGVLDHEEAKRQNV 445
           TVELQGRI DCRALTYRQDLKAK+I+++    LPTRQWGYVVITTPNGVLDHEEA +QNV
Sbjct: 61  TVELQGRINDCRALTYRQDLKAKDIEKYTANKLPTRQWGYVVITTPNGVLDHEEAAQQNV 120

Query: 446 GGQVLGYFH 472
           GGQVLGYF+
Sbjct: 121 GGQVLGYFY 129


>gb|AFW88085.1| putative ribosomal protein S8 family protein [Zea mays]
          Length = 129

 Score =  211 bits (537), Expect = 1e-52
 Identities = 101/129 (78%), Positives = 115/129 (89%)
 Frame = +2

Query: 86  MGRRILNDALRTMVNAERRGKATANLQPVSNVIAAFLKIMKSRGYIKDYQVADMNRVGKI 265
           MGRRILNDALRTMVNA+RRG A+A L+P+S V+ +FL IMK RGYIK ++V D NRVGKI
Sbjct: 1   MGRRILNDALRTMVNADRRGNASALLRPISGVMVSFLNIMKYRGYIKKFEVIDENRVGKI 60

Query: 266 TVELQGRIKDCRALTYRQDLKAKEIDEFKIRTLPTRQWGYVVITTPNGVLDHEEAKRQNV 445
            VEL GR+KDC+ALTYRQDLKAKEI+ +++R LPTRQWGYVVITTPNGVLDHEEA RQNV
Sbjct: 61  RVELDGRLKDCKALTYRQDLKAKEIERYRVRMLPTRQWGYVVITTPNGVLDHEEAIRQNV 120

Query: 446 GGQVLGYFH 472
           GGQVLGYFH
Sbjct: 121 GGQVLGYFH 129


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