BLASTX nr result

ID: Coptis21_contig00007991 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007991
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323579.1| predicted protein [Populus trichocarpa] gi|2...   199   3e-49
ref|XP_003552245.1| PREDICTED: LIMR family protein At5g01460-lik...   198   7e-49
ref|NP_195766.1| LMBR1-like membrane protein [Arabidopsis thalia...   197   1e-48
ref|XP_002882590.1| hypothetical protein ARALYDRAFT_478196 [Arab...   197   1e-48
ref|XP_003548743.1| PREDICTED: LOW QUALITY PROTEIN: LIMR family ...   196   2e-48

>ref|XP_002323579.1| predicted protein [Populus trichocarpa] gi|222868209|gb|EEF05340.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score =  199 bits (506), Expect = 3e-49
 Identities = 100/116 (86%), Positives = 101/116 (87%)
 Frame = +3

Query: 3   AVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCXXXXXXXXXXX 182
           AVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFC           
Sbjct: 392 AVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCATAFGYYAQAT 451

Query: 183 XXXEIFGHTLQSLRGIKYLYKYNVFQIAFVVLAGLTFVYYIAFGWRRRKPSGRFQL 350
              EIFGHTLQSLRGIKYLYKYNVFQIAFVVLAGLTFVYY AFGWRR+KPSGRFQL
Sbjct: 452 AAQEIFGHTLQSLRGIKYLYKYNVFQIAFVVLAGLTFVYYAAFGWRRKKPSGRFQL 507


>ref|XP_003552245.1| PREDICTED: LIMR family protein At5g01460-like [Glycine max]
          Length = 509

 Score =  198 bits (503), Expect = 7e-49
 Identities = 99/116 (85%), Positives = 101/116 (87%)
 Frame = +3

Query: 3   AVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCXXXXXXXXXXX 182
           AVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFC           
Sbjct: 392 AVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCSTAFAYYAQAT 451

Query: 183 XXXEIFGHTLQSLRGIKYLYKYNVFQIAFVVLAGLTFVYYIAFGWRRRKPSGRFQL 350
              EIFGHTL+SLRGIKYLYKYNVFQIAFVVLAGLTFVYY AFGWRR+KPSGRFQL
Sbjct: 452 AAQEIFGHTLESLRGIKYLYKYNVFQIAFVVLAGLTFVYYAAFGWRRKKPSGRFQL 507


>ref|NP_195766.1| LMBR1-like membrane protein [Arabidopsis thaliana]
           gi|75181394|sp|Q9M028.1|LMBD2_ARATH RecName: Full=LIMR
           family protein At5g01460 gi|7320724|emb|CAB81929.1|
           putative protein [Arabidopsis thaliana]
           gi|18176296|gb|AAL60018.1| unknown protein [Arabidopsis
           thaliana] gi|20465353|gb|AAM20080.1| unknown protein
           [Arabidopsis thaliana] gi|332002964|gb|AED90347.1|
           LMBR1-like membrane protein [Arabidopsis thaliana]
          Length = 509

 Score =  197 bits (501), Expect = 1e-48
 Identities = 98/116 (84%), Positives = 101/116 (87%)
 Frame = +3

Query: 3   AVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCXXXXXXXXXXX 182
           AVIAGAMMLGL+LVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFC           
Sbjct: 392 AVIAGAMMLGLKLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCATAFGYYAQAT 451

Query: 183 XXXEIFGHTLQSLRGIKYLYKYNVFQIAFVVLAGLTFVYYIAFGWRRRKPSGRFQL 350
              EIFGHTLQSLRGIKYLYKYNVFQI FVVLAGLTF+YYIAFGWRR+KPSGRFQL
Sbjct: 452 AAQEIFGHTLQSLRGIKYLYKYNVFQIGFVVLAGLTFLYYIAFGWRRKKPSGRFQL 507


>ref|XP_002882590.1| hypothetical protein ARALYDRAFT_478196 [Arabidopsis lyrata subsp.
           lyrata] gi|297328430|gb|EFH58849.1| hypothetical protein
           ARALYDRAFT_478196 [Arabidopsis lyrata subsp. lyrata]
          Length = 509

 Score =  197 bits (500), Expect = 1e-48
 Identities = 97/116 (83%), Positives = 101/116 (87%)
 Frame = +3

Query: 3   AVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCXXXXXXXXXXX 182
           AVIAGAMMLGL+LVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFC           
Sbjct: 392 AVIAGAMMLGLKLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCATAFGYYAQAT 451

Query: 183 XXXEIFGHTLQSLRGIKYLYKYNVFQIAFVVLAGLTFVYYIAFGWRRRKPSGRFQL 350
              EIFGHTLQSLRGIKYLYKYNVFQI FV+LAGLTF+YYIAFGWRR+KPSGRFQL
Sbjct: 452 AAQEIFGHTLQSLRGIKYLYKYNVFQIGFVILAGLTFLYYIAFGWRRKKPSGRFQL 507


>ref|XP_003548743.1| PREDICTED: LOW QUALITY PROTEIN: LIMR family protein At5g01460-like
           [Glycine max]
          Length = 400

 Score =  196 bits (499), Expect = 2e-48
 Identities = 98/116 (84%), Positives = 100/116 (86%)
 Frame = +3

Query: 3   AVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCXXXXXXXXXXX 182
           AVIAGAMMLGLRLVFITIHPMKWG TLMNSFLFNVGLILLCSISVIQFC           
Sbjct: 283 AVIAGAMMLGLRLVFITIHPMKWGGTLMNSFLFNVGLILLCSISVIQFCSTAFAYYAQAT 342

Query: 183 XXXEIFGHTLQSLRGIKYLYKYNVFQIAFVVLAGLTFVYYIAFGWRRRKPSGRFQL 350
              EIFGHTL+SLRGIKYLYKYNVFQIAFVVLAGLTFVYY AFGWRR+KPSGRFQL
Sbjct: 343 AAQEIFGHTLESLRGIKYLYKYNVFQIAFVVLAGLTFVYYAAFGWRRKKPSGRFQL 398


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