BLASTX nr result
ID: Coptis21_contig00007991
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00007991 (593 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002323579.1| predicted protein [Populus trichocarpa] gi|2... 199 3e-49 ref|XP_003552245.1| PREDICTED: LIMR family protein At5g01460-lik... 198 7e-49 ref|NP_195766.1| LMBR1-like membrane protein [Arabidopsis thalia... 197 1e-48 ref|XP_002882590.1| hypothetical protein ARALYDRAFT_478196 [Arab... 197 1e-48 ref|XP_003548743.1| PREDICTED: LOW QUALITY PROTEIN: LIMR family ... 196 2e-48 >ref|XP_002323579.1| predicted protein [Populus trichocarpa] gi|222868209|gb|EEF05340.1| predicted protein [Populus trichocarpa] Length = 509 Score = 199 bits (506), Expect = 3e-49 Identities = 100/116 (86%), Positives = 101/116 (87%) Frame = +3 Query: 3 AVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCXXXXXXXXXXX 182 AVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFC Sbjct: 392 AVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCATAFGYYAQAT 451 Query: 183 XXXEIFGHTLQSLRGIKYLYKYNVFQIAFVVLAGLTFVYYIAFGWRRRKPSGRFQL 350 EIFGHTLQSLRGIKYLYKYNVFQIAFVVLAGLTFVYY AFGWRR+KPSGRFQL Sbjct: 452 AAQEIFGHTLQSLRGIKYLYKYNVFQIAFVVLAGLTFVYYAAFGWRRKKPSGRFQL 507 >ref|XP_003552245.1| PREDICTED: LIMR family protein At5g01460-like [Glycine max] Length = 509 Score = 198 bits (503), Expect = 7e-49 Identities = 99/116 (85%), Positives = 101/116 (87%) Frame = +3 Query: 3 AVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCXXXXXXXXXXX 182 AVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFC Sbjct: 392 AVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCSTAFAYYAQAT 451 Query: 183 XXXEIFGHTLQSLRGIKYLYKYNVFQIAFVVLAGLTFVYYIAFGWRRRKPSGRFQL 350 EIFGHTL+SLRGIKYLYKYNVFQIAFVVLAGLTFVYY AFGWRR+KPSGRFQL Sbjct: 452 AAQEIFGHTLESLRGIKYLYKYNVFQIAFVVLAGLTFVYYAAFGWRRKKPSGRFQL 507 >ref|NP_195766.1| LMBR1-like membrane protein [Arabidopsis thaliana] gi|75181394|sp|Q9M028.1|LMBD2_ARATH RecName: Full=LIMR family protein At5g01460 gi|7320724|emb|CAB81929.1| putative protein [Arabidopsis thaliana] gi|18176296|gb|AAL60018.1| unknown protein [Arabidopsis thaliana] gi|20465353|gb|AAM20080.1| unknown protein [Arabidopsis thaliana] gi|332002964|gb|AED90347.1| LMBR1-like membrane protein [Arabidopsis thaliana] Length = 509 Score = 197 bits (501), Expect = 1e-48 Identities = 98/116 (84%), Positives = 101/116 (87%) Frame = +3 Query: 3 AVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCXXXXXXXXXXX 182 AVIAGAMMLGL+LVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFC Sbjct: 392 AVIAGAMMLGLKLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCATAFGYYAQAT 451 Query: 183 XXXEIFGHTLQSLRGIKYLYKYNVFQIAFVVLAGLTFVYYIAFGWRRRKPSGRFQL 350 EIFGHTLQSLRGIKYLYKYNVFQI FVVLAGLTF+YYIAFGWRR+KPSGRFQL Sbjct: 452 AAQEIFGHTLQSLRGIKYLYKYNVFQIGFVVLAGLTFLYYIAFGWRRKKPSGRFQL 507 >ref|XP_002882590.1| hypothetical protein ARALYDRAFT_478196 [Arabidopsis lyrata subsp. lyrata] gi|297328430|gb|EFH58849.1| hypothetical protein ARALYDRAFT_478196 [Arabidopsis lyrata subsp. lyrata] Length = 509 Score = 197 bits (500), Expect = 1e-48 Identities = 97/116 (83%), Positives = 101/116 (87%) Frame = +3 Query: 3 AVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCXXXXXXXXXXX 182 AVIAGAMMLGL+LVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFC Sbjct: 392 AVIAGAMMLGLKLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCATAFGYYAQAT 451 Query: 183 XXXEIFGHTLQSLRGIKYLYKYNVFQIAFVVLAGLTFVYYIAFGWRRRKPSGRFQL 350 EIFGHTLQSLRGIKYLYKYNVFQI FV+LAGLTF+YYIAFGWRR+KPSGRFQL Sbjct: 452 AAQEIFGHTLQSLRGIKYLYKYNVFQIGFVILAGLTFLYYIAFGWRRKKPSGRFQL 507 >ref|XP_003548743.1| PREDICTED: LOW QUALITY PROTEIN: LIMR family protein At5g01460-like [Glycine max] Length = 400 Score = 196 bits (499), Expect = 2e-48 Identities = 98/116 (84%), Positives = 100/116 (86%) Frame = +3 Query: 3 AVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCXXXXXXXXXXX 182 AVIAGAMMLGLRLVFITIHPMKWG TLMNSFLFNVGLILLCSISVIQFC Sbjct: 283 AVIAGAMMLGLRLVFITIHPMKWGGTLMNSFLFNVGLILLCSISVIQFCSTAFAYYAQAT 342 Query: 183 XXXEIFGHTLQSLRGIKYLYKYNVFQIAFVVLAGLTFVYYIAFGWRRRKPSGRFQL 350 EIFGHTL+SLRGIKYLYKYNVFQIAFVVLAGLTFVYY AFGWRR+KPSGRFQL Sbjct: 343 AAQEIFGHTLESLRGIKYLYKYNVFQIAFVVLAGLTFVYYAAFGWRRKKPSGRFQL 398