BLASTX nr result

ID: Coptis21_contig00007990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007990
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634989.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    62   5e-08
emb|CBI38291.3| unnamed protein product [Vitis vinifera]               62   5e-08
emb|CAN82847.1| hypothetical protein VITISV_000504 [Vitis vinifera]    62   5e-08
ref|XP_002283705.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    58   1e-06
emb|CAN75517.1| hypothetical protein VITISV_033021 [Vitis vinifera]    58   1e-06

>ref|XP_003634989.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Vitis
            vinifera]
          Length = 997

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/43 (69%), Positives = 31/43 (72%)
 Frame = -1

Query: 535  KKVRISKDSFDGSNPFQEIATKKGQLKKVNSDRTSSGNQPLRI 407
            KKVR S  SF G NPFQEIATKK   KK   DR+SSGNQP RI
Sbjct: 955  KKVRSSNGSFGGPNPFQEIATKKAHFKKAKKDRSSSGNQPFRI 997


>emb|CBI38291.3| unnamed protein product [Vitis vinifera]
          Length = 135

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/43 (69%), Positives = 31/43 (72%)
 Frame = -1

Query: 535 KKVRISKDSFDGSNPFQEIATKKGQLKKVNSDRTSSGNQPLRI 407
           KKVR S  SF G NPFQEIATKK   KK   DR+SSGNQP RI
Sbjct: 93  KKVRSSNGSFGGPNPFQEIATKKAHFKKAKKDRSSSGNQPFRI 135


>emb|CAN82847.1| hypothetical protein VITISV_000504 [Vitis vinifera]
          Length = 1142

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/43 (69%), Positives = 31/43 (72%)
 Frame = -1

Query: 535  KKVRISKDSFDGSNPFQEIATKKGQLKKVNSDRTSSGNQPLRI 407
            KKVR S  SF G NPFQEIATKK   KK   DR+SSGNQP RI
Sbjct: 1100 KKVRSSNGSFGGPNPFQEIATKKAHFKKAKKDRSSSGNQPFRI 1142


>ref|XP_002283705.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Vitis
            vinifera]
          Length = 955

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/43 (67%), Positives = 31/43 (72%)
 Frame = -1

Query: 535  KKVRISKDSFDGSNPFQEIATKKGQLKKVNSDRTSSGNQPLRI 407
            KKVR SK SF   NPFQEIATKK   KK   DR+SS NQPLR+
Sbjct: 913  KKVRSSKGSFGEPNPFQEIATKKAHFKKAKMDRSSSRNQPLRM 955


>emb|CAN75517.1| hypothetical protein VITISV_033021 [Vitis vinifera]
          Length = 918

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/43 (67%), Positives = 31/43 (72%)
 Frame = -1

Query: 535  KKVRISKDSFDGSNPFQEIATKKGQLKKVNSDRTSSGNQPLRI 407
            KKVR SK SF   NPFQEIATKK   KK   DR+SS NQPLR+
Sbjct: 876  KKVRSSKGSFGEPNPFQEIATKKAHFKKAKMDRSSSRNQPLRM 918


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