BLASTX nr result

ID: Coptis21_contig00007985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007985
         (1411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27884.3| unnamed protein product [Vitis vinifera]              467   e-129
ref|XP_004144008.1| PREDICTED: WD repeat-containing protein DWA1...   459   e-127
ref|XP_002281247.2| PREDICTED: eukaryotic initiation factor 4A-1...   454   e-125
ref|XP_003550627.1| PREDICTED: uncharacterized protein LOC100806...   448   e-123
ref|XP_003541292.1| PREDICTED: eukaryotic initiation factor 4A-1...   442   e-122

>emb|CBI27884.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score =  467 bits (1201), Expect = e-129
 Identities = 232/371 (62%), Positives = 276/371 (74%), Gaps = 11/371 (2%)
 Frame = -2

Query: 1386 DARKWDEEEYKSSILKERELQSLTVFRTVFAPCQNLNTPEIIVAAXXXXXXXXXXXXXXX 1207
            DAR WDE+ Y++SILKERE+Q+ TVFR +FAP QN N   I+VA+               
Sbjct: 4    DARDWDEDGYRNSILKEREIQTRTVFRAIFAPSQNPNPDVIVVASSDGTLASYSISSCIS 63

Query: 1206 XXXXXXS--------GYLVAEPICLLRGHDGPAYDVKFYXXXXXXXXXXXG---RIQGWK 1060
                  +        G  VAEP C L+GHDGPAYDVKFY           G   RI+GW+
Sbjct: 64   QLSGFGNARPRKSLLGLPVAEPNCFLQGHDGPAYDVKFYGDGEESLLLSCGDDGRIRGWR 123

Query: 1059 WNQVLDSEIPISMQGKDMEPILNLVNPQHKGPWGALSPIPENNAIAIDSQGGSIFSAAGD 880
            W ++  SE+ I +QG  +EP+L+LVNPQHKGPWGALSP+PENNAIA+++Q GS+F+AAGD
Sbjct: 124  WKEITQSEVHIPLQGNHVEPVLDLVNPQHKGPWGALSPVPENNAIAVNAQWGSVFAAAGD 183

Query: 879  SFAYCWDVETTKIKMVFKGHSDYLHCIAARNSSNQIITGSEDGTVRTWDCKSGKCIHVID 700
            S AYCWDVE +KIKMVFKGHSDYLHCI ARNSSNQIITGSEDGT R WDC+SGKCI VID
Sbjct: 184  SCAYCWDVEKSKIKMVFKGHSDYLHCIIARNSSNQIITGSEDGTARIWDCQSGKCIQVID 243

Query: 699  PAKNTELKGTFSWISCIGLDASETWLAFSSGKTLSIWNLPASEPITRVVTGYPIQDLLFD 520
              K+ + K  FS +SCI LDASE+WLA+  G++LS+WNLPA E +TRV T    QD++FD
Sbjct: 244  AKKDKKPKEIFSCVSCIALDASESWLAYGRGRSLSVWNLPACERVTRVSTHASFQDIVFD 303

Query: 519  ENQILAVGAEPVLSRFDMDGTALSQINCAPQSGFSVSLHSSGVTAVGGYGGLVDIISQFG 340
            +NQILAVGAEP+LSRFD++G  LSQI CAPQS FSVSLH SGVTAV GYGG+VD+ISQFG
Sbjct: 304  DNQILAVGAEPLLSRFDINGVILSQIQCAPQSAFSVSLHPSGVTAVAGYGGVVDVISQFG 363

Query: 339  SHLCTFCCRGR 307
            SHLCTF  RGR
Sbjct: 364  SHLCTF--RGR 372


>ref|XP_004144008.1| PREDICTED: WD repeat-containing protein DWA1-like [Cucumis sativus]
            gi|449489893|ref|XP_004158451.1| PREDICTED: WD
            repeat-containing protein DWA1-like [Cucumis sativus]
          Length = 369

 Score =  459 bits (1181), Expect = e-127
 Identities = 224/367 (61%), Positives = 270/367 (73%), Gaps = 7/367 (1%)
 Frame = -2

Query: 1386 DARKWDEEEYKSSILKERELQSLTVFRTVFAPCQNLNTPEIIVAAXXXXXXXXXXXXXXX 1207
            DA  WDE  Y+ SI KERE+Q+ TVFRT +AP  N   PE IVAA               
Sbjct: 4    DATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLN-GCPETIVAASSDGSVASYSIASCI 62

Query: 1206 XXXXXXSG----YLVAEPICLLRGHDGPAYDVKFYXXXXXXXXXXXG---RIQGWKWNQV 1048
                   G     L AEP C L+GHDGP YDVKFY           G    I+GW+W   
Sbjct: 63   SKLQFGYGNTKSLLAAEPNCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWRDC 122

Query: 1047 LDSEIPISMQGKDMEPILNLVNPQHKGPWGALSPIPENNAIAIDSQGGSIFSAAGDSFAY 868
             D ++PIS+QG  +EP+++L+NPQ KGPWGALSPIPENNAIA D+Q GSIFSAAGDS AY
Sbjct: 123  TDIKVPISLQGSHIEPVMDLINPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCAY 182

Query: 867  CWDVETTKIKMVFKGHSDYLHCIAARNSSNQIITGSEDGTVRTWDCKSGKCIHVIDPAKN 688
            CWD+E+ K+KMVFKGHSDYLHCI ARN+ NQIITGSEDGT R WDCKSGKCI +IDPAK+
Sbjct: 183  CWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPAKD 242

Query: 687  TELKGTFSWISCIGLDASETWLAFSSGKTLSIWNLPASEPITRVVTGYPIQDLLFDENQI 508
             +LKG FS++ CI LDASE+WLA + G+++S+WNLP+SE I++ +T   +QD++F +NQI
Sbjct: 243  KKLKGHFSFVRCIALDASESWLACADGRSISVWNLPSSEFISKTLTRSSLQDMVFCDNQI 302

Query: 507  LAVGAEPVLSRFDMDGTALSQINCAPQSGFSVSLHSSGVTAVGGYGGLVDIISQFGSHLC 328
            L VGAEP L+RFD++G+ LSQI CAPQS FSV+LH SGV AVGGYGGLVD+ISQFGSHLC
Sbjct: 303  LGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLVDVISQFGSHLC 362

Query: 327  TFCCRGR 307
            TFCC+ R
Sbjct: 363  TFCCQYR 369


>ref|XP_002281247.2| PREDICTED: eukaryotic initiation factor 4A-15-like [Vitis vinifera]
          Length = 803

 Score =  454 bits (1167), Expect = e-125
 Identities = 231/381 (60%), Positives = 274/381 (71%), Gaps = 12/381 (3%)
 Frame = -2

Query: 1386 DARKWDEEEYKSSILKERELQSLTVFRTVFAPCQNLNTPEIIVA---------AXXXXXX 1234
            DAR WDE+ Y++SILKERE+Q+ TVFR +FAP QN N   I+VA         +      
Sbjct: 4    DARDWDEDGYRNSILKEREIQTRTVFRAIFAPSQNPNPDVIVVASSDGTLASYSISSCIS 63

Query: 1233 XXXXXXXXXXXXXXXSGYLVAEPICLLRGHDGPAYDVKFY---XXXXXXXXXXXGRIQGW 1063
                            G  VAEP C L+GHDGPAYDVKFY              GRI+GW
Sbjct: 64   QLQSGFGNARPRKSLLGLPVAEPNCFLQGHDGPAYDVKFYGDGEESLLLSCGDDGRIRGW 123

Query: 1062 KWNQVLDSEIPISMQGKDMEPILNLVNPQHKGPWGALSPIPENNAIAIDSQGGSIFSAAG 883
            +W ++  SE+        +EP+L+LVNPQHKGPWGALSP+PENNAIA+++Q GS+F+AAG
Sbjct: 124  RWKEITQSEV------HHVEPVLDLVNPQHKGPWGALSPVPENNAIAVNAQWGSVFAAAG 177

Query: 882  DSFAYCWDVETTKIKMVFKGHSDYLHCIAARNSSNQIITGSEDGTVRTWDCKSGKCIHVI 703
            DS AYCWDVE +KIKMVFKGHSDYLHCI ARNSSNQIITGSEDGT R WDC+SGKCI VI
Sbjct: 178  DSCAYCWDVEKSKIKMVFKGHSDYLHCIIARNSSNQIITGSEDGTARIWDCQSGKCIQVI 237

Query: 702  DPAKNTELKGTFSWISCIGLDASETWLAFSSGKTLSIWNLPASEPITRVVTGYPIQDLLF 523
            D  K+ + K  FS +SCI LDASE+WLA+  G++LS+WNLPA E +TRV T    QD++F
Sbjct: 238  DAKKDKKPKEIFSCVSCIALDASESWLAYGRGRSLSVWNLPACERVTRVSTHASFQDIVF 297

Query: 522  DENQILAVGAEPVLSRFDMDGTALSQINCAPQSGFSVSLHSSGVTAVGGYGGLVDIISQF 343
            D+NQILAVGAEP+LSRFD++G  LSQI CAPQS FSVSLH SGVTAV GYGG+VD+ISQF
Sbjct: 298  DDNQILAVGAEPLLSRFDINGVILSQIQCAPQSAFSVSLHPSGVTAVAGYGGVVDVISQF 357

Query: 342  GSHLCTFCCRGR*SIALSGFS 280
            GSHLCTF    R S+ LS  S
Sbjct: 358  GSHLCTF----RVSLVLSHLS 374


>ref|XP_003550627.1| PREDICTED: uncharacterized protein LOC100806423 [Glycine max]
          Length = 863

 Score =  448 bits (1153), Expect = e-123
 Identities = 215/369 (58%), Positives = 270/369 (73%), Gaps = 11/369 (2%)
 Frame = -2

Query: 1386 DARKWDEEEYKSSILKERELQSLTVFRTVFAPCQNLNTPEIIVAAXXXXXXXXXXXXXXX 1207
            DA  WDE+ Y+ +ILKERE+Q+ TVFRT +AP    N   +I+A+               
Sbjct: 4    DATNWDEDAYRETILKEREIQTRTVFRTAWAPPYTSNLDTLILASSDGSVASYSISSSIA 63

Query: 1206 XXXXXXS-GY-------LVAEPICLLRGHDGPAYDVKFYXXXXXXXXXXXG---RIQGWK 1060
                    G+       L+AEP C ++ HDGPAYDV+FY           G   RI+GW+
Sbjct: 64   ASKIKNPFGFVNADTDELLAEPNCFVQAHDGPAYDVRFYGDGEDALLLSCGDDGRIRGWR 123

Query: 1059 WNQVLDSEIPISMQGKDMEPILNLVNPQHKGPWGALSPIPENNAIAIDSQGGSIFSAAGD 880
            WN+   S   +S QG D++P+L++VNPQHKGPWGALSPIPENNAIA+++QGGS+F+A+GD
Sbjct: 124  WNEFSSSNYSVSSQGNDIKPVLDVVNPQHKGPWGALSPIPENNAIAVNTQGGSVFAASGD 183

Query: 879  SFAYCWDVETTKIKMVFKGHSDYLHCIAARNSSNQIITGSEDGTVRTWDCKSGKCIHVID 700
            S AYCWDVET K+KMVFKGH DYLHCI ARNS +QIITGSEDGT R WDCKSGKC  VID
Sbjct: 184  SCAYCWDVETGKVKMVFKGHMDYLHCIVARNSLDQIITGSEDGTTRIWDCKSGKCTQVID 243

Query: 699  PAKNTELKGTFSWISCIGLDASETWLAFSSGKTLSIWNLPASEPITRVVTGYPIQDLLFD 520
            PA++ +LKG+ SW+ C+ LDASE+WLA SSG+ +S+WNLPASE I+++ T   +QD+LFD
Sbjct: 244  PARDLKLKGSASWVGCVALDASESWLACSSGRNISLWNLPASECISKIPTRACVQDMLFD 303

Query: 519  ENQILAVGAEPVLSRFDMDGTALSQINCAPQSGFSVSLHSSGVTAVGGYGGLVDIISQFG 340
             NQIL VG +P+L+RFDM+GT LSQI CAP S FS+SLH +GV AVGGYG LVD+ISQFG
Sbjct: 304  NNQILTVGTDPLLNRFDMNGTILSQIQCAPSSSFSISLHPAGVMAVGGYGCLVDVISQFG 363

Query: 339  SHLCTFCCR 313
            SH+CTF C+
Sbjct: 364  SHMCTFHCQ 372


>ref|XP_003541292.1| PREDICTED: eukaryotic initiation factor 4A-15-like [Glycine max]
          Length = 821

 Score =  442 bits (1138), Expect = e-122
 Identities = 210/369 (56%), Positives = 268/369 (72%), Gaps = 11/369 (2%)
 Frame = -2

Query: 1386 DARKWDEEEYKSSILKERELQSLTVFRTVFAPCQNLNTPEIIVAAXXXXXXXXXXXXXXX 1207
            DA  WDE+ Y+ ++L+ERE+Q+ TVFRT +AP    N   ++VA+               
Sbjct: 4    DATNWDEDAYRETVLREREIQTRTVFRTAWAPPYTSNLDTLLVASSDGSVASYSISSSVV 63

Query: 1206 XXXXXXS-GY-------LVAEPICLLRGHDGPAYDVKFYXXXXXXXXXXXG---RIQGWK 1060
                    G+       L+AEP C ++ H GPAYDVKFY           G   +I+GW+
Sbjct: 64   ASKLKNPFGFVNADTDELLAEPNCFVQAHAGPAYDVKFYGDGEDALLLSCGDDGQIRGWR 123

Query: 1059 WNQVLDSEIPISMQGKDMEPILNLVNPQHKGPWGALSPIPENNAIAIDSQGGSIFSAAGD 880
            W +   S   +S QG D++P+L++VNPQHKGPWGALSP+PENNAIA+++QGGS+F+A+GD
Sbjct: 124  WKEFSSSNYSVSSQGNDIKPVLDVVNPQHKGPWGALSPVPENNAIAVNTQGGSVFAASGD 183

Query: 879  SFAYCWDVETTKIKMVFKGHSDYLHCIAARNSSNQIITGSEDGTVRTWDCKSGKCIHVID 700
            S AYCWDVET K+KMVFKGH DYLHCI ARNSSNQIITGSEDGT R WDCKSGKC  VID
Sbjct: 184  SCAYCWDVETGKVKMVFKGHMDYLHCIVARNSSNQIITGSEDGTTRIWDCKSGKCTQVID 243

Query: 699  PAKNTELKGTFSWISCIGLDASETWLAFSSGKTLSIWNLPASEPITRVVTGYPIQDLLFD 520
            PA++ +LKG+ SW+ C+ LDASE+WLA SSG+ +S+WNLPASE ++++ T   +QD+ FD
Sbjct: 244  PARDLKLKGSASWVGCVALDASESWLACSSGRNISLWNLPASECVSKIPTRACVQDMSFD 303

Query: 519  ENQILAVGAEPVLSRFDMDGTALSQINCAPQSGFSVSLHSSGVTAVGGYGGLVDIISQFG 340
             NQIL VG +P+L+RFDM+GT LSQI CAP S FS+SLH +GV AVGGYG LVD+ISQFG
Sbjct: 304  NNQILTVGTDPLLNRFDMNGTILSQIQCAPSSSFSISLHPAGVMAVGGYGCLVDVISQFG 363

Query: 339  SHLCTFCCR 313
            SH+CTF C+
Sbjct: 364  SHMCTFRCQ 372


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