BLASTX nr result

ID: Coptis21_contig00007984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007984
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549776.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-l...    97   1e-18
ref|XP_003549775.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-l...    97   1e-18
gb|ABK26655.1| unknown [Picea sitchensis]                              90   2e-16
ref|NP_001242502.1| uncharacterized protein LOC100776602 [Glycin...    89   3e-16
ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [...    87   1e-15

>ref|XP_003549776.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like isoform 2 [Glycine
           max]
          Length = 401

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/75 (58%), Positives = 53/75 (70%)
 Frame = -3

Query: 226 AIGELVQLHSPHFLCFQEITPNIYKIFQQSSWWGDYCCSMSEEEANKRQYFCILLSKFCP 47
           AIG+LVQLHSP F+CFQE+TPNIY IF+ S+WW  YCCS+S E A  R YFC+LLSK   
Sbjct: 154 AIGDLVQLHSPDFICFQEVTPNIYDIFKGSAWWSVYCCSVSSEMAYSRPYFCMLLSKLPV 213

Query: 46  VRVIIAPLRNSLVSR 2
                 P  NS++ R
Sbjct: 214 KSFSNKPFSNSIMGR 228


>ref|XP_003549775.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like isoform 1 [Glycine
           max]
          Length = 402

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/75 (58%), Positives = 53/75 (70%)
 Frame = -3

Query: 226 AIGELVQLHSPHFLCFQEITPNIYKIFQQSSWWGDYCCSMSEEEANKRQYFCILLSKFCP 47
           AIG+LVQLHSP F+CFQE+TPNIY IF+ S+WW  YCCS+S E A  R YFC+LLSK   
Sbjct: 155 AIGDLVQLHSPDFICFQEVTPNIYDIFKGSAWWSVYCCSVSSEMAYSRPYFCMLLSKLPV 214

Query: 46  VRVIIAPLRNSLVSR 2
                 P  NS++ R
Sbjct: 215 KSFSNKPFSNSIMGR 229


>gb|ABK26655.1| unknown [Picea sitchensis]
          Length = 322

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 38/75 (50%), Positives = 52/75 (69%)
 Frame = -3

Query: 226 AIGELVQLHSPHFLCFQEITPNIYKIFQQSSWWGDYCCSMSEEEANKRQYFCILLSKFCP 47
           A+G+L++ H PHF+CFQE+TPNIY+IF+ SSWW  Y CS+S E A +R YFC+ LS+   
Sbjct: 100 ALGDLIEQHQPHFICFQEVTPNIYEIFRHSSWWAKYKCSVSPEHAMRRAYFCMQLSRLPV 159

Query: 46  VRVIIAPLRNSLVSR 2
                 P  NS++ R
Sbjct: 160 EDFRRKPYANSIMGR 174


>ref|NP_001242502.1| uncharacterized protein LOC100776602 [Glycine max]
           gi|255637077|gb|ACU18870.1| unknown [Glycine max]
          Length = 393

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/75 (53%), Positives = 51/75 (68%)
 Frame = -3

Query: 226 AIGELVQLHSPHFLCFQEITPNIYKIFQQSSWWGDYCCSMSEEEANKRQYFCILLSKFCP 47
           AIG+LVQ HSP F+CFQE+TPNIY IF++S+WW  Y CS+S E    R YFC++LSK   
Sbjct: 156 AIGDLVQFHSPDFICFQEVTPNIYDIFKRSTWWSGYRCSVSSEMDYSRPYFCMVLSKLPV 215

Query: 46  VRVIIAPLRNSLVSR 2
                 P  NS++ R
Sbjct: 216 KSFSKKPFSNSIMGR 230


>ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [Vitis vinifera]
          Length = 447

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 39/75 (52%), Positives = 50/75 (66%)
 Frame = -3

Query: 226 AIGELVQLHSPHFLCFQEITPNIYKIFQQSSWWGDYCCSMSEEEANKRQYFCILLSKFCP 47
           A+G+L+QLHSP  +CFQE+TPNIY +FQQS WW  Y CS+  E A+ R YFC+LLSK   
Sbjct: 200 ALGDLIQLHSPDLICFQEVTPNIYDVFQQSCWWKVYRCSVPNEMAHLRPYFCMLLSKLPV 259

Query: 46  VRVIIAPLRNSLVSR 2
                    NS++ R
Sbjct: 260 KSFSCKRFSNSIMGR 274


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