BLASTX nr result

ID: Coptis21_contig00007971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007971
         (1275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532149.1| PREDICTED: protein SEC13 homolog [Glycine max]    569   e-160
ref|XP_003551869.1| PREDICTED: protein SEC13 homolog [Glycine max]    568   e-160
ref|XP_002281856.1| PREDICTED: protein SEC13 homolog [Vitis vini...   567   e-159
gb|ACU20139.1| unknown [Glycine max]                                  566   e-159
dbj|BAJ10727.1| SEC13 family protein [Lotus japonicus] gi|388515...   566   e-159

>ref|XP_003532149.1| PREDICTED: protein SEC13 homolog [Glycine max]
          Length = 301

 Score =  569 bits (1466), Expect = e-160
 Identities = 263/301 (87%), Positives = 278/301 (92%)
 Frame = -3

Query: 1186 MPGQKIETGHTDTVHDVVMDYYGKRIATASSDTTIKIVGVSSTASQHLATLSGHQGPVWQ 1007
            MP QK+ETGH DTVHDV MDYYGKR+ATASSD TIKI+GVS+TASQHLATL+GHQGPVWQ
Sbjct: 1    MPSQKVETGHQDTVHDVAMDYYGKRLATASSDHTIKIIGVSNTASQHLATLTGHQGPVWQ 60

Query: 1006 VAWAHPKFGSLLASCSYDGRVIIWKEGNQNEWSQAHVFSEHKVSVNSICWAPHELGLALA 827
            VAWAHPKFGSLLASCSYDGRVI+WKEGNQNEW+QAHVF +HK SVNS+ WAPHELGL LA
Sbjct: 61   VAWAHPKFGSLLASCSYDGRVIVWKEGNQNEWTQAHVFDDHKSSVNSVAWAPHELGLCLA 120

Query: 826  CGSSDGNISVFTAGADGGWDTTRIGQAHPAGVTSVSWAPALAPGAFVGNGSLEPVTKLVS 647
            CGSSDGNISV TA ADGGWDT RI QAHP GVTSVSWAP++APGA VG G L+PV KL S
Sbjct: 121  CGSSDGNISVLTARADGGWDTVRIDQAHPVGVTSVSWAPSMAPGALVGAGLLDPVQKLCS 180

Query: 646  GGCDNTVKVWKLTNGVWKMDCFPALLMHTDWVRDVAWAPNLGLPKSTIASASQDGKVVIW 467
            GGCDNTVKVWKL NG+WKMDCFPAL MHTDWVRDVAWAPNLGLPKSTIASASQDGKV+IW
Sbjct: 181  GGCDNTVKVWKLNNGLWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIW 240

Query: 466  TVAKEGDQWEGIVLKDFQTPVWRVSWSLTGNILAVADGDNNVTLWKEAVDGEWQQVTTVE 287
            TVAKEGDQWEG VL DF TPVWRVSWSLTGNILAVADG+NNVTLWKEAVDGEWQQVTTVE
Sbjct: 241  TVAKEGDQWEGKVLNDFNTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGEWQQVTTVE 300

Query: 286  P 284
            P
Sbjct: 301  P 301


>ref|XP_003551869.1| PREDICTED: protein SEC13 homolog [Glycine max]
          Length = 301

 Score =  568 bits (1465), Expect = e-160
 Identities = 262/301 (87%), Positives = 279/301 (92%)
 Frame = -3

Query: 1186 MPGQKIETGHTDTVHDVVMDYYGKRIATASSDTTIKIVGVSSTASQHLATLSGHQGPVWQ 1007
            MP QK+ETGH DTVHDV MDYYGKR+ATASSD TIKI+GVS+TASQHLATL+GHQGPVWQ
Sbjct: 1    MPSQKVETGHQDTVHDVAMDYYGKRLATASSDHTIKIIGVSNTASQHLATLTGHQGPVWQ 60

Query: 1006 VAWAHPKFGSLLASCSYDGRVIIWKEGNQNEWSQAHVFSEHKVSVNSICWAPHELGLALA 827
            V WAHPKFGSLLASCS+DGRVI+WKEGNQNEW+QAHVF +HK SVNS+ WAPHELGL LA
Sbjct: 61   VVWAHPKFGSLLASCSFDGRVIVWKEGNQNEWTQAHVFDDHKSSVNSVAWAPHELGLCLA 120

Query: 826  CGSSDGNISVFTAGADGGWDTTRIGQAHPAGVTSVSWAPALAPGAFVGNGSLEPVTKLVS 647
            CGSSDGNISVFTA ADGGWDT RI QAHP GVTSVSWAP++APGA VG G L+PV KL S
Sbjct: 121  CGSSDGNISVFTARADGGWDTARIDQAHPVGVTSVSWAPSMAPGALVGAGLLDPVQKLCS 180

Query: 646  GGCDNTVKVWKLTNGVWKMDCFPALLMHTDWVRDVAWAPNLGLPKSTIASASQDGKVVIW 467
            GGCDNTVKVWKL NG+WKMDCFPAL MHTDWVRDVAWAPNLGLPKSTIASASQDGKV+IW
Sbjct: 181  GGCDNTVKVWKLNNGLWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIW 240

Query: 466  TVAKEGDQWEGIVLKDFQTPVWRVSWSLTGNILAVADGDNNVTLWKEAVDGEWQQVTTVE 287
            TVAKEGDQWEG VL DF+TPVWRVSWSLTGNILAVADG+NNVTLWKEAVDGEWQQVTTVE
Sbjct: 241  TVAKEGDQWEGKVLNDFKTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGEWQQVTTVE 300

Query: 286  P 284
            P
Sbjct: 301  P 301


>ref|XP_002281856.1| PREDICTED: protein SEC13 homolog [Vitis vinifera]
            gi|147809687|emb|CAN73348.1| hypothetical protein
            VITISV_040760 [Vitis vinifera]
          Length = 301

 Score =  567 bits (1462), Expect = e-159
 Identities = 264/301 (87%), Positives = 280/301 (93%)
 Frame = -3

Query: 1186 MPGQKIETGHTDTVHDVVMDYYGKRIATASSDTTIKIVGVSSTASQHLATLSGHQGPVWQ 1007
            MP QKIETGH DTVHDV MDYYGKR+ATASSDTTIKI+GVS+ ASQHLATL GHQGPVWQ
Sbjct: 1    MPSQKIETGHQDTVHDVAMDYYGKRVATASSDTTIKIIGVSNNASQHLATLIGHQGPVWQ 60

Query: 1006 VAWAHPKFGSLLASCSYDGRVIIWKEGNQNEWSQAHVFSEHKVSVNSICWAPHELGLALA 827
            V WAHPKFGS+LASCSYDGRVIIWKEGNQNEW+QAHVFS+HK SVNSI WAPHELGL LA
Sbjct: 61   VVWAHPKFGSILASCSYDGRVIIWKEGNQNEWTQAHVFSDHKSSVNSIAWAPHELGLCLA 120

Query: 826  CGSSDGNISVFTAGADGGWDTTRIGQAHPAGVTSVSWAPALAPGAFVGNGSLEPVTKLVS 647
            CGSSDGNISVFTA +DG WDTT+I QAHP GVTSVSWAP++APGA VG+G L+PV KLVS
Sbjct: 121  CGSSDGNISVFTARSDGTWDTTKIDQAHPVGVTSVSWAPSMAPGALVGSGLLDPVQKLVS 180

Query: 646  GGCDNTVKVWKLTNGVWKMDCFPALLMHTDWVRDVAWAPNLGLPKSTIASASQDGKVVIW 467
            GGCDNTVKVWKL NG WKMDCFPAL MHTDWVRDVAWAPNLGLPKSTIASASQDG VVIW
Sbjct: 181  GGCDNTVKVWKLYNGNWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGTVVIW 240

Query: 466  TVAKEGDQWEGIVLKDFQTPVWRVSWSLTGNILAVADGDNNVTLWKEAVDGEWQQVTTVE 287
            TVAKEGDQWEG VLKDF+TPVWRVSWSLTGN+LAVADG+NNVTLWKEAVDGEWQQVTTV+
Sbjct: 241  TVAKEGDQWEGKVLKDFKTPVWRVSWSLTGNLLAVADGNNNVTLWKEAVDGEWQQVTTVD 300

Query: 286  P 284
            P
Sbjct: 301  P 301


>gb|ACU20139.1| unknown [Glycine max]
          Length = 301

 Score =  567 bits (1460), Expect = e-159
 Identities = 262/301 (87%), Positives = 277/301 (92%)
 Frame = -3

Query: 1186 MPGQKIETGHTDTVHDVVMDYYGKRIATASSDTTIKIVGVSSTASQHLATLSGHQGPVWQ 1007
            MP QK+ETGH DTVHDV MDYYGKR+ATASSD TIKI+GVS+TASQHLATL+GHQGPVWQ
Sbjct: 1    MPSQKVETGHQDTVHDVAMDYYGKRLATASSDHTIKIIGVSNTASQHLATLTGHQGPVWQ 60

Query: 1006 VAWAHPKFGSLLASCSYDGRVIIWKEGNQNEWSQAHVFSEHKVSVNSICWAPHELGLALA 827
            VAWAHPKFGSLLASCSYDGRVI+WKEGNQNEW+QAHVF +HK SVNS+ WAPHELGL LA
Sbjct: 61   VAWAHPKFGSLLASCSYDGRVIVWKEGNQNEWTQAHVFDDHKSSVNSVAWAPHELGLCLA 120

Query: 826  CGSSDGNISVFTAGADGGWDTTRIGQAHPAGVTSVSWAPALAPGAFVGNGSLEPVTKLVS 647
            CGSSDGNISV TA ADGGWDT  I QAHP GVTSVSWAP++APGA VG G L+PV KL S
Sbjct: 121  CGSSDGNISVLTARADGGWDTVSIDQAHPVGVTSVSWAPSMAPGALVGAGLLDPVQKLCS 180

Query: 646  GGCDNTVKVWKLTNGVWKMDCFPALLMHTDWVRDVAWAPNLGLPKSTIASASQDGKVVIW 467
            GGCDNTVKVWKL NG+WKMDCFPAL MHTDWVRDVAWAPNLGLPKSTIASASQDGKV+IW
Sbjct: 181  GGCDNTVKVWKLNNGLWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIW 240

Query: 466  TVAKEGDQWEGIVLKDFQTPVWRVSWSLTGNILAVADGDNNVTLWKEAVDGEWQQVTTVE 287
            TVAKEGDQWEG VL DF TPVWRVSWSLTGNILAVADG+NNVTLWKEAVDGEWQQVTTVE
Sbjct: 241  TVAKEGDQWEGKVLNDFNTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGEWQQVTTVE 300

Query: 286  P 284
            P
Sbjct: 301  P 301


>dbj|BAJ10727.1| SEC13 family protein [Lotus japonicus] gi|388515669|gb|AFK45896.1|
            unknown [Lotus japonicus]
          Length = 301

 Score =  566 bits (1459), Expect = e-159
 Identities = 261/301 (86%), Positives = 279/301 (92%)
 Frame = -3

Query: 1186 MPGQKIETGHTDTVHDVVMDYYGKRIATASSDTTIKIVGVSSTASQHLATLSGHQGPVWQ 1007
            MP QK+ETGH DTVHDV MDYYGKR+ATASSD TIKI+GVS+TASQHLATL+GHQGPVWQ
Sbjct: 1    MPAQKVETGHQDTVHDVAMDYYGKRLATASSDHTIKIIGVSNTASQHLATLAGHQGPVWQ 60

Query: 1006 VAWAHPKFGSLLASCSYDGRVIIWKEGNQNEWSQAHVFSEHKVSVNSICWAPHELGLALA 827
            VAWAHPKFGS++ASCSYDGRVIIWKEGNQNEW QAHVF +HK SVNS+ WAPHELGL LA
Sbjct: 61   VAWAHPKFGSMIASCSYDGRVIIWKEGNQNEWIQAHVFDDHKSSVNSVVWAPHELGLCLA 120

Query: 826  CGSSDGNISVFTAGADGGWDTTRIGQAHPAGVTSVSWAPALAPGAFVGNGSLEPVTKLVS 647
            CGSSDGNISVFTA ADGGWDT+RI QAHP GVTSVSWAP++APGA VG G L+PV KL S
Sbjct: 121  CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSMAPGALVGAGLLDPVQKLCS 180

Query: 646  GGCDNTVKVWKLTNGVWKMDCFPALLMHTDWVRDVAWAPNLGLPKSTIASASQDGKVVIW 467
            GGCDNTVKVWKLTNG WKMDCFPAL MHTDWVRDVAWAPNLGLPKSTIASASQDGKV+IW
Sbjct: 181  GGCDNTVKVWKLTNGNWKMDCFPALHMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIW 240

Query: 466  TVAKEGDQWEGIVLKDFQTPVWRVSWSLTGNILAVADGDNNVTLWKEAVDGEWQQVTTVE 287
            TV KEGDQWEG +L DF+TPVWRVSWSLTGNILAVADG+NNVTLWKEAVDGEWQQVTTV+
Sbjct: 241  TVGKEGDQWEGKILNDFKTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGEWQQVTTVD 300

Query: 286  P 284
            P
Sbjct: 301  P 301


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