BLASTX nr result

ID: Coptis21_contig00007952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007952
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EIE20089.1| succinate dehydrogenase [Coccomyxa subellipsoidea...   161   6e-38
ref|XP_003537583.1| PREDICTED: succinate dehydrogenase [ubiquino...   161   6e-38
ref|XP_003537582.1| PREDICTED: succinate dehydrogenase [ubiquino...   161   6e-38
ref|XP_003517235.1| PREDICTED: succinate dehydrogenase [ubiquino...   161   6e-38
ref|XP_003517234.1| PREDICTED: succinate dehydrogenase [ubiquino...   161   6e-38

>gb|EIE20089.1| succinate dehydrogenase [Coccomyxa subellipsoidea C-169]
          Length = 606

 Score =  161 bits (407), Expect = 6e-38
 Identities = 77/83 (92%), Positives = 81/83 (97%)
 Frame = +1

Query: 1   TGDGNAMAARAGLPLEDLEFVQFHPTGIYGSGCLITEGSRGEGGTLRNSEGERFMERYAP 180
           TGDGNAMAARAGLPL+DLEFVQFHPTGIYG+GCLITEGSRGEGG LRNSEGERFMERYAP
Sbjct: 229 TGDGNAMAARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAP 288

Query: 181 TAKDLASRDIVCRAMTMEIREGR 249
           TAKDLASRD+V R+MTMEIREGR
Sbjct: 289 TAKDLASRDVVSRSMTMEIREGR 311


>ref|XP_003537583.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1, mitochondrial-like isoform 2 [Glycine max]
          Length = 622

 Score =  161 bits (407), Expect = 6e-38
 Identities = 77/83 (92%), Positives = 80/83 (96%)
 Frame = +1

Query: 1   TGDGNAMAARAGLPLEDLEFVQFHPTGIYGSGCLITEGSRGEGGTLRNSEGERFMERYAP 180
           TGDGNAM ARAG+PLEDLEFVQFHPTGIYG+GCLITEGSRGEGG LRNSEGERFMERYAP
Sbjct: 250 TGDGNAMVARAGIPLEDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAP 309

Query: 181 TAKDLASRDIVCRAMTMEIREGR 249
           TAKDLASRD+V RAMTMEIREGR
Sbjct: 310 TAKDLASRDVVSRAMTMEIREGR 332


>ref|XP_003537582.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1, mitochondrial-like isoform 1 [Glycine max]
          Length = 630

 Score =  161 bits (407), Expect = 6e-38
 Identities = 77/83 (92%), Positives = 80/83 (96%)
 Frame = +1

Query: 1   TGDGNAMAARAGLPLEDLEFVQFHPTGIYGSGCLITEGSRGEGGTLRNSEGERFMERYAP 180
           TGDGNAM ARAG+PLEDLEFVQFHPTGIYG+GCLITEGSRGEGG LRNSEGERFMERYAP
Sbjct: 258 TGDGNAMVARAGIPLEDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAP 317

Query: 181 TAKDLASRDIVCRAMTMEIREGR 249
           TAKDLASRD+V RAMTMEIREGR
Sbjct: 318 TAKDLASRDVVSRAMTMEIREGR 340


>ref|XP_003517235.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1, mitochondrial-like isoform 2 [Glycine max]
          Length = 622

 Score =  161 bits (407), Expect = 6e-38
 Identities = 77/83 (92%), Positives = 80/83 (96%)
 Frame = +1

Query: 1   TGDGNAMAARAGLPLEDLEFVQFHPTGIYGSGCLITEGSRGEGGTLRNSEGERFMERYAP 180
           TGDGNAM ARAG+PLEDLEFVQFHPTGIYG+GCLITEGSRGEGG LRNSEGERFMERYAP
Sbjct: 250 TGDGNAMVARAGIPLEDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAP 309

Query: 181 TAKDLASRDIVCRAMTMEIREGR 249
           TAKDLASRD+V RAMTMEIREGR
Sbjct: 310 TAKDLASRDVVSRAMTMEIREGR 332


>ref|XP_003517234.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1, mitochondrial-like isoform 1 [Glycine max]
          Length = 630

 Score =  161 bits (407), Expect = 6e-38
 Identities = 77/83 (92%), Positives = 80/83 (96%)
 Frame = +1

Query: 1   TGDGNAMAARAGLPLEDLEFVQFHPTGIYGSGCLITEGSRGEGGTLRNSEGERFMERYAP 180
           TGDGNAM ARAG+PLEDLEFVQFHPTGIYG+GCLITEGSRGEGG LRNSEGERFMERYAP
Sbjct: 258 TGDGNAMVARAGIPLEDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAP 317

Query: 181 TAKDLASRDIVCRAMTMEIREGR 249
           TAKDLASRD+V RAMTMEIREGR
Sbjct: 318 TAKDLASRDVVSRAMTMEIREGR 340


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