BLASTX nr result

ID: Coptis21_contig00007928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007928
         (1169 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146507.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   196   7e-48
ref|XP_003547946.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   196   7e-48
dbj|BAJ34365.1| unnamed protein product [Thellungiella halophila]     196   1e-47
ref|XP_002884105.1| PIN1AT [Arabidopsis lyrata subsp. lyrata] gi...   194   5e-47
ref|XP_002310854.1| predicted protein [Populus trichocarpa] gi|2...   194   5e-47

>ref|XP_004146507.1| PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1-like [Cucumis
           sativus] gi|449499971|ref|XP_004160967.1| PREDICTED:
           peptidyl-prolyl cis-trans isomerase Pin1-like [Cucumis
           sativus]
          Length = 122

 Score =  196 bits (499), Expect = 7e-48
 Identities = 94/116 (81%), Positives = 105/116 (90%)
 Frame = +2

Query: 392 TEKVRASHILIKHSGSRRKASWKDPEGRIISNTSKQTAVEQLKAFKDDIVSGKIKFEDVA 571
           T +VRASHILIKH GSRR ASWKDPEGRII NT++++AV QL   ++DI+SGK KFED+A
Sbjct: 7   TAQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRESAVSQLTVIRNDIISGKAKFEDIA 66

Query: 572 TRYSDCSSAKRGGDLGPFGRGQMQQPFEEATYALKVGEISDIVDTDSGVHIIMRTA 739
           TR SDCSSAKRGGDLGPFGRGQMQ+PFEEATYALKVGEISDI+DTDSGVHII RTA
Sbjct: 67  TRISDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGEISDIIDTDSGVHIIKRTA 122


>ref|XP_003547946.1| PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1-like [Glycine
           max]
          Length = 126

 Score =  196 bits (499), Expect = 7e-48
 Identities = 94/113 (83%), Positives = 105/113 (92%)
 Frame = +2

Query: 398 KVRASHILIKHSGSRRKASWKDPEGRIISNTSKQTAVEQLKAFKDDIVSGKIKFEDVATR 577
           +VRASHILIKH GSRRKASWKDPEGRII +T+++ AV QLKA +DDIVSGK  FED+A+R
Sbjct: 13  EVRASHILIKHEGSRRKASWKDPEGRIIKSTTRENAVSQLKALRDDIVSGKASFEDIASR 72

Query: 578 YSDCSSAKRGGDLGPFGRGQMQQPFEEATYALKVGEISDIVDTDSGVHIIMRT 736
           +SDCSSAKRGGDLGPFGRGQMQ+PFEEAT+ALKVGEISDIVDTDSGVHII RT
Sbjct: 73  FSDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKRT 125


>dbj|BAJ34365.1| unnamed protein product [Thellungiella halophila]
          Length = 119

 Score =  196 bits (497), Expect = 1e-47
 Identities = 94/115 (81%), Positives = 106/115 (92%)
 Frame = +2

Query: 395 EKVRASHILIKHSGSRRKASWKDPEGRIISNTSKQTAVEQLKAFKDDIVSGKIKFEDVAT 574
           ++V+ASHILIKH GSRRKASWKDPEG+II  T+++ AVEQLK+ ++DIVSGK  FEDVAT
Sbjct: 5   DQVKASHILIKHQGSRRKASWKDPEGKIIMTTTREAAVEQLKSIREDIVSGKANFEDVAT 64

Query: 575 RYSDCSSAKRGGDLGPFGRGQMQQPFEEATYALKVGEISDIVDTDSGVHIIMRTA 739
           R SDCSSAKRGGDLGPFGRGQMQ+PFEEATYALKVG+ISDIVDTDSGVHII RTA
Sbjct: 65  RVSDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119


>ref|XP_002884105.1| PIN1AT [Arabidopsis lyrata subsp. lyrata]
           gi|297329945|gb|EFH60364.1| PIN1AT [Arabidopsis lyrata
           subsp. lyrata]
          Length = 119

 Score =  194 bits (492), Expect = 5e-47
 Identities = 93/115 (80%), Positives = 106/115 (92%)
 Frame = +2

Query: 395 EKVRASHILIKHSGSRRKASWKDPEGRIISNTSKQTAVEQLKAFKDDIVSGKIKFEDVAT 574
           ++V+ASHILIKH GSRRKASWKDPEG+II  T+++ AVEQLK+ ++DIVSGK  FE+VAT
Sbjct: 5   DQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVAT 64

Query: 575 RYSDCSSAKRGGDLGPFGRGQMQQPFEEATYALKVGEISDIVDTDSGVHIIMRTA 739
           R SDCSSAKRGGDLGPFGRGQMQ+PFEEATYALKVG+ISDIVDTDSGVHII RTA
Sbjct: 65  RVSDCSSAKRGGDLGPFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119


>ref|XP_002310854.1| predicted protein [Populus trichocarpa] gi|222853757|gb|EEE91304.1|
           predicted protein [Populus trichocarpa]
          Length = 122

 Score =  194 bits (492), Expect = 5e-47
 Identities = 91/113 (80%), Positives = 105/113 (92%)
 Frame = +2

Query: 398 KVRASHILIKHSGSRRKASWKDPEGRIISNTSKQTAVEQLKAFKDDIVSGKIKFEDVATR 577
           +VRASHILIKH GSRRKASWKDPEGR+I NT++ +A+ +LKA ++DIVSGK KFEDVA+R
Sbjct: 9   QVRASHILIKHEGSRRKASWKDPEGRVIKNTTRDSAISELKAIREDIVSGKAKFEDVASR 68

Query: 578 YSDCSSAKRGGDLGPFGRGQMQQPFEEATYALKVGEISDIVDTDSGVHIIMRT 736
            SDCSSAKRGGDLGPFGRGQMQ+PFEE T++LKVGEISDIVDTDSGVHII+RT
Sbjct: 69  ISDCSSAKRGGDLGPFGRGQMQKPFEETTFSLKVGEISDIVDTDSGVHIILRT 121


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