BLASTX nr result

ID: Coptis21_contig00007922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007922
         (1227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homo...    79   2e-17
ref|XP_002328846.1| predicted protein [Populus trichocarpa] gi|2...    82   2e-17
emb|CAN78953.1| hypothetical protein VITISV_004722 [Vitis vinifera]    79   3e-17
ref|XP_002520390.1| conserved hypothetical protein [Ricinus comm...    74   6e-17
ref|XP_002456814.1| hypothetical protein SORBIDRAFT_03g043310 [S...    84   6e-14

>ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homolog [Vitis vinifera]
           gi|296081277|emb|CBI17721.3| unnamed protein product
           [Vitis vinifera]
          Length = 774

 Score = 79.3 bits (194), Expect(2) = 2e-17
 Identities = 42/96 (43%), Positives = 58/96 (60%)
 Frame = +1

Query: 442 RLQKIQPLLEILQPKCVMLPEVLRLKLPISESRSHWVLHYYSENETQSIPSSRKDFEISL 621
           +LQK+QPLL+ILQPK V+ PE LR  +  S++ SH    YY ENET  +PS +   E+ +
Sbjct: 584 KLQKVQPLLKILQPKFVLFPEDLRQLVSYSDTNSH-AFFYYCENETLPVPSLKNSSELEI 642

Query: 622 ATNLAFQLRPTLIKQDSIAIARLKGKLIVDHGNFEL 729
           A +L   +    +  +SI I RLKG   V HG  +L
Sbjct: 643 AADLVSLIHCRRLTAESIGIGRLKGDFSVTHGKHQL 678



 Score = 37.0 bits (84), Expect(2) = 2e-17
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
 Frame = +2

Query: 755 GINGSLQQ-----EADKVGMIQVYEPEKALIEVHAMHTIVSA 865
           GI GS++Q     +++   ++ VYEP KALIEV    TI+SA
Sbjct: 713 GIRGSVEQGNSDTDSENARVVHVYEPNKALIEVRENSTIISA 754


>ref|XP_002328846.1| predicted protein [Populus trichocarpa] gi|222839144|gb|EEE77495.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score = 82.4 bits (202), Expect(2) = 2e-17
 Identities = 43/96 (44%), Positives = 62/96 (64%)
 Frame = +1

Query: 442 RLQKIQPLLEILQPKCVMLPEVLRLKLPISESRSHWVLHYYSENETQSIPSSRKDFEISL 621
           RLQK QPLLE+L+PK V+ PE LR ++  S S S  V  YY+ENET  +P S+   ++ +
Sbjct: 23  RLQKTQPLLEMLRPKEVLFPEDLREQIKFSGSHSFSVF-YYAENETLGVPRSKGSVDLEI 81

Query: 622 ATNLAFQLRPTLIKQDSIAIARLKGKLIVDHGNFEL 729
           A+NLA Q     +  D + I RL+G+L +DHG  ++
Sbjct: 82  ASNLATQFSWRKLDHDDVDITRLEGQLFIDHGKHQV 117



 Score = 33.9 bits (76), Expect(2) = 2e-17
 Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
 Frame = +2

Query: 755 GINGSLQQ-----EADKVGMIQVYEPEKALIEVHAMHTIVSA 865
           G+ GS+++     E+    ++ ++EP KALIEV A  T++SA
Sbjct: 152 GVKGSVERCMSDAESGSDEIVHIHEPSKALIEVRATRTVISA 193


>emb|CAN78953.1| hypothetical protein VITISV_004722 [Vitis vinifera]
          Length = 665

 Score = 78.6 bits (192), Expect(2) = 3e-17
 Identities = 42/95 (44%), Positives = 57/95 (60%)
 Frame = +1

Query: 445 LQKIQPLLEILQPKCVMLPEVLRLKLPISESRSHWVLHYYSENETQSIPSSRKDFEISLA 624
           LQK+QPLL+ILQPK V+ PE LR  +  S++ SH    YY ENET  +PS +   E+ +A
Sbjct: 476 LQKVQPLLKILQPKFVLFPEDLRQLVSYSDTNSH-AFFYYCENETLPVPSLKNSSELEIA 534

Query: 625 TNLAFQLRPTLIKQDSIAIARLKGKLIVDHGNFEL 729
            +L   +    +  +SI I RLKG   V HG  +L
Sbjct: 535 ADLVSLIHCRRLTAESIGIGRLKGDFSVTHGKHQL 569



 Score = 37.0 bits (84), Expect(2) = 3e-17
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
 Frame = +2

Query: 755 GINGSLQQ-----EADKVGMIQVYEPEKALIEVHAMHTIVSA 865
           GI GS++Q     +++   ++ VYEP KALIEV    TI+SA
Sbjct: 604 GIRGSVEQGNXDTDSENARVVHVYEPNKALIEVRENSTIISA 645


>ref|XP_002520390.1| conserved hypothetical protein [Ricinus communis]
           gi|223540437|gb|EEF42006.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 705

 Score = 73.9 bits (180), Expect(2) = 6e-17
 Identities = 41/97 (42%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
 Frame = +1

Query: 442 RLQKIQPLLEILQPKCVMLPEVLRLKLPISESRSH-WVLHYYSENETQSIPSSRKDFEIS 618
           R QKIQPLL+IL PK V+ PE L+  +  S S SH + + YY+ENETQ I S +   ++ 
Sbjct: 514 RTQKIQPLLKILHPKVVLFPEDLKQHINASSSSSHPFSVLYYTENETQEIQSLKDSSDVE 573

Query: 619 LATNLAFQLRPTLIKQDSIAIARLKGKLIVDHGNFEL 729
           +AT+LA +     +K+    I RL+G+L++D     L
Sbjct: 574 IATDLATRFCWKKLKRKDTDITRLEGELLIDDSKHRL 610



 Score = 40.8 bits (94), Expect(2) = 6e-17
 Identities = 18/42 (42%), Positives = 32/42 (76%), Gaps = 5/42 (11%)
 Frame = +2

Query: 755 GINGSLQQ-----EADKVGMIQVYEPEKALIEVHAMHTIVSA 865
           G NGS+++     E+D VG+I++++P++ALIEV  M T+++A
Sbjct: 644 GFNGSIERNMNDGESDSVGIIKIHDPKEALIEVGGMSTVINA 685


>ref|XP_002456814.1| hypothetical protein SORBIDRAFT_03g043310 [Sorghum bicolor]
           gi|241928789|gb|EES01934.1| hypothetical protein
           SORBIDRAFT_03g043310 [Sorghum bicolor]
          Length = 557

 Score = 84.3 bits (207), Expect = 6e-14
 Identities = 43/96 (44%), Positives = 68/96 (70%)
 Frame = +1

Query: 442 RLQKIQPLLEILQPKCVMLPEVLRLKLPISESRSHWVLHYYSENETQSIPSSRKDFEISL 621
           R+ KI PLL +L+PK V+LPE L+ + PI E    W   YYS+ +T  +P+ R++FE+ L
Sbjct: 373 RVGKIDPLLRMLKPKFVLLPEGLKSRCPIQEVP--WSFFYYSKGKTIELPNLREEFEVHL 430

Query: 622 ATNLAFQLRPTLIKQDSIAIARLKGKLIVDHGNFEL 729
           AT++AF+L+P  +  ++ A+ARL+ KL+V +G F+L
Sbjct: 431 ATDVAFRLQPRQL-NETTAVARLRTKLLVSNGRFQL 465


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