BLASTX nr result

ID: Coptis21_contig00007918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007918
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306098.1| predicted protein [Populus trichocarpa] gi|2...   422   e-116
ref|XP_002313052.1| predicted protein [Populus trichocarpa] gi|2...   419   e-115
ref|XP_002509478.1| guanine nucleotide-binding protein beta, put...   416   e-114
emb|CAN73515.1| hypothetical protein VITISV_027042 [Vitis vinifera]   414   e-113
ref|XP_003537878.1| PREDICTED: guanine nucleotide-binding protei...   412   e-113

>ref|XP_002306098.1| predicted protein [Populus trichocarpa] gi|222849062|gb|EEE86609.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score =  422 bits (1086), Expect = e-116
 Identities = 196/225 (87%), Positives = 211/225 (93%)
 Frame = +1

Query: 1   IFNLNSPIDRDGNLPVSRLLSGHKGYVTSCQYVPDEDTHLITSSGDQTCVLWDVTTGQRI 180
           IFNLNSP D+DGNLPVSR+LSGHKGYV+SCQYVPDEDTHLITSSGDQTCVLWD+TTG R 
Sbjct: 133 IFNLNSPTDKDGNLPVSRMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGIRT 192

Query: 181 SVFGGEFPSGHTADVLSVSINRSNSKMFVSGSCDTTARLWDTRIASRAVRTYHGHNGDVN 360
           SVFGGEF SGHTADVLSVSIN SNS+MFVSGSCD+TARLWDTR+ASRAVRT+HGH GDVN
Sbjct: 193 SVFGGEFQSGHTADVLSVSINGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVN 252

Query: 361 TVKFFPDGQRFGTGSDDGTCRLFDMRTGHELQVYYQQHGDNDVPTVTSIAFSISGRLMFV 540
            VKFFPDG RFGTGSDDGTCRLFD+RTGH+LQVYY QHGD ++P VTSIAFSISGRL+F 
Sbjct: 253 AVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYHQHGDTEIPHVTSIAFSISGRLLFA 312

Query: 541 GYSNGDCYVWDTLMAEVVLNLGSLQNSHEGRITCLGMSTDGSALC 675
           GYSNGDCYVWDTL+AE VLNLGSLQNSHEGRITCLG+S DGSALC
Sbjct: 313 GYSNGDCYVWDTLLAEAVLNLGSLQNSHEGRITCLGLSADGSALC 357


>ref|XP_002313052.1| predicted protein [Populus trichocarpa] gi|222849460|gb|EEE87007.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score =  419 bits (1077), Expect = e-115
 Identities = 195/225 (86%), Positives = 212/225 (94%)
 Frame = +1

Query: 1   IFNLNSPIDRDGNLPVSRLLSGHKGYVTSCQYVPDEDTHLITSSGDQTCVLWDVTTGQRI 180
           IFNLNSP D+DGNL VSR+LSGHKGYV+SCQYVPDEDTHLITSSGDQTCVLWD+TTG R 
Sbjct: 133 IFNLNSPTDKDGNLTVSRMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRT 192

Query: 181 SVFGGEFPSGHTADVLSVSINRSNSKMFVSGSCDTTARLWDTRIASRAVRTYHGHNGDVN 360
           SVFGGEF SGHTADVLSVSI+ SNS+MFVSGSCD+TARLWDTR+ASRAVRT+HGH GDVN
Sbjct: 193 SVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVN 252

Query: 361 TVKFFPDGQRFGTGSDDGTCRLFDMRTGHELQVYYQQHGDNDVPTVTSIAFSISGRLMFV 540
            VKFFPDG RFGTGSDDGTCRLFD+RTGH+LQVYYQQHGDN++  VTSIAFSISGRL+F 
Sbjct: 253 AVKFFPDGNRFGTGSDDGTCRLFDVRTGHQLQVYYQQHGDNEIAHVTSIAFSISGRLLFA 312

Query: 541 GYSNGDCYVWDTLMAEVVLNLGSLQNSHEGRITCLGMSTDGSALC 675
           GYSNGDCYVWDTL+AEVVLNLGSLQNSHEGRI+CLG+S DGSALC
Sbjct: 313 GYSNGDCYVWDTLLAEVVLNLGSLQNSHEGRISCLGLSADGSALC 357


>ref|XP_002509478.1| guanine nucleotide-binding protein beta, putative [Ricinus
           communis] gi|223549377|gb|EEF50865.1| guanine
           nucleotide-binding protein beta, putative [Ricinus
           communis]
          Length = 377

 Score =  416 bits (1070), Expect = e-114
 Identities = 192/225 (85%), Positives = 213/225 (94%)
 Frame = +1

Query: 1   IFNLNSPIDRDGNLPVSRLLSGHKGYVTSCQYVPDEDTHLITSSGDQTCVLWDVTTGQRI 180
           IFNLNSP ++DGNLPVS++LSGHKGYV++CQYVPDEDTHLITSSGDQTCVLWD+TTG R 
Sbjct: 133 IFNLNSPTEKDGNLPVSKMLSGHKGYVSACQYVPDEDTHLITSSGDQTCVLWDITTGLRT 192

Query: 181 SVFGGEFPSGHTADVLSVSINRSNSKMFVSGSCDTTARLWDTRIASRAVRTYHGHNGDVN 360
           SVFGGEF SGHTADVLSVSIN SNS+MFVSGSCD+TARLWDTR+ASRAVRT+HGH GDV+
Sbjct: 193 SVFGGEFQSGHTADVLSVSINGSNSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVS 252

Query: 361 TVKFFPDGQRFGTGSDDGTCRLFDMRTGHELQVYYQQHGDNDVPTVTSIAFSISGRLMFV 540
            VKFFPDG RFGTGSDDGTCRLFD+RTGH+LQVYYQQH DN+VP VTSIAFSISGRL+F 
Sbjct: 253 AVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHNDNEVPHVTSIAFSISGRLLFA 312

Query: 541 GYSNGDCYVWDTLMAEVVLNLGSLQNSHEGRITCLGMSTDGSALC 675
           GYSNGDCYVWDTL+A+VVL+LGSLQNSHEGRI+CLG+S DGSALC
Sbjct: 313 GYSNGDCYVWDTLLAQVVLDLGSLQNSHEGRISCLGLSADGSALC 357


>emb|CAN73515.1| hypothetical protein VITISV_027042 [Vitis vinifera]
          Length = 366

 Score =  414 bits (1063), Expect = e-113
 Identities = 191/225 (84%), Positives = 211/225 (93%)
 Frame = +1

Query: 1   IFNLNSPIDRDGNLPVSRLLSGHKGYVTSCQYVPDEDTHLITSSGDQTCVLWDVTTGQRI 180
           IFNLNSP D+DGNL +S++LSGHKGYV+SCQYVPDEDTHLITSSGDQTCVLWD+TTG R 
Sbjct: 122 IFNLNSPTDKDGNLAISKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRT 181

Query: 181 SVFGGEFPSGHTADVLSVSINRSNSKMFVSGSCDTTARLWDTRIASRAVRTYHGHNGDVN 360
           SVFGGEF SGHTADVLSVSI+ SNS+MFVSGSCD TARLWDTR ASRAVRT+HGH GDVN
Sbjct: 182 SVFGGEFQSGHTADVLSVSISGSNSRMFVSGSCDATARLWDTRAASRAVRTFHGHEGDVN 241

Query: 361 TVKFFPDGQRFGTGSDDGTCRLFDMRTGHELQVYYQQHGDNDVPTVTSIAFSISGRLMFV 540
           TV+FFPDG RFGTGSDDGTCRLFD+RTGH+LQVYYQ+HGDN+VP VTSIAFSISGRL+F 
Sbjct: 242 TVRFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQEHGDNEVPHVTSIAFSISGRLLFA 301

Query: 541 GYSNGDCYVWDTLMAEVVLNLGSLQNSHEGRITCLGMSTDGSALC 675
           GYSNGDCYVWDTL+A+VVLNLGSLQNSH+ RI+CLG+S DGSALC
Sbjct: 302 GYSNGDCYVWDTLLAKVVLNLGSLQNSHDSRISCLGLSADGSALC 346


>ref|XP_003537878.1| PREDICTED: guanine nucleotide-binding protein subunit beta-2-like
           [Glycine max]
          Length = 377

 Score =  412 bits (1058), Expect = e-113
 Identities = 188/225 (83%), Positives = 209/225 (92%)
 Frame = +1

Query: 1   IFNLNSPIDRDGNLPVSRLLSGHKGYVTSCQYVPDEDTHLITSSGDQTCVLWDVTTGQRI 180
           IFNLNSP D+DGNLPVSR+LSGHKGYV+SCQYVPDEDTHLIT SGDQTCVLWD+TTG + 
Sbjct: 133 IFNLNSPTDKDGNLPVSRMLSGHKGYVSSCQYVPDEDTHLITGSGDQTCVLWDITTGLKT 192

Query: 181 SVFGGEFPSGHTADVLSVSINRSNSKMFVSGSCDTTARLWDTRIASRAVRTYHGHNGDVN 360
           SVFGGEF SGHTADVLS+SIN SNS+MFVSGSCD TARLWDTR+ASRAVRT+HGH GDVN
Sbjct: 193 SVFGGEFQSGHTADVLSISINGSNSRMFVSGSCDATARLWDTRVASRAVRTFHGHEGDVN 252

Query: 361 TVKFFPDGQRFGTGSDDGTCRLFDMRTGHELQVYYQQHGDNDVPTVTSIAFSISGRLMFV 540
            VKFFPDG RFGTGSDDGTCRLFD+RTGH+LQVYYQQH DN++P VTSIAFS SGRL+F 
Sbjct: 253 AVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHSDNEIPPVTSIAFSASGRLLFA 312

Query: 541 GYSNGDCYVWDTLMAEVVLNLGSLQNSHEGRITCLGMSTDGSALC 675
           GY+NGDCYVWDTL+A+VVLN+GSLQ+SHE RI+CLG+S DGSALC
Sbjct: 313 GYTNGDCYVWDTLLAKVVLNIGSLQDSHEDRISCLGLSADGSALC 357


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