BLASTX nr result

ID: Coptis21_contig00007868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007868
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272933.1| PREDICTED: uncharacterized protein At5g43822...    67   2e-09
ref|XP_004144893.1| PREDICTED: uncharacterized protein At5g43822...    63   2e-08
dbj|BAJ99010.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   4e-06
ref|NP_001065428.1| Os10g0566900 [Oryza sativa Japonica Group] g...    55   5e-06
ref|XP_002306984.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>ref|XP_002272933.1| PREDICTED: uncharacterized protein At5g43822 [Vitis vinifera]
           gi|297745571|emb|CBI40736.3| unnamed protein product
           [Vitis vinifera]
          Length = 198

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/66 (54%), Positives = 44/66 (66%)
 Frame = -3

Query: 199 LQEPKSSGVLKGINGIKEEILGKQMLSLELILCFLKDTMSDFQGIVMSLEKIFRDGRHLA 20
           +Q  K+ G LK I+GI + +L KQM SLE IL  LK T+ +F GIV+SLEKI RDGR L 
Sbjct: 46  IQNSKNYGTLKCIDGIGDAVLRKQMESLETILLSLKKTLKEFHGIVLSLEKIVRDGRQLV 105

Query: 19  NASSRK 2
              S K
Sbjct: 106 KGGSVK 111


>ref|XP_004144893.1| PREDICTED: uncharacterized protein At5g43822-like [Cucumis sativus]
           gi|449474129|ref|XP_004154081.1| PREDICTED:
           uncharacterized protein At5g43822-like [Cucumis sativus]
           gi|449500156|ref|XP_004161020.1| PREDICTED:
           uncharacterized protein At5g43822-like [Cucumis sativus]
          Length = 200

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/68 (45%), Positives = 45/68 (66%)
 Frame = -3

Query: 205 KVLQEPKSSGVLKGINGIKEEILGKQMLSLELILCFLKDTMSDFQGIVMSLEKIFRDGRH 26
           ++LQ+PK+ G L G++GI E +L KQM SL+L    +K TM +   IV S+EKI+RDG+ 
Sbjct: 44  QLLQDPKNFGSLSGMDGIVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQ 103

Query: 25  LANASSRK 2
           L    S +
Sbjct: 104 LVKGGSNQ 111


>dbj|BAJ99010.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 194

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 26/65 (40%), Positives = 40/65 (61%)
 Frame = -3

Query: 202 VLQEPKSSGVLKGINGIKEEILGKQMLSLELILCFLKDTMSDFQGIVMSLEKIFRDGRHL 23
           VL + K+ GVL+ +  I+E++LGKQM SLELI   +++T+ +  GI   L K+ RD   +
Sbjct: 45  VLGDAKNYGVLRCVPNIREDLLGKQMESLELIFVLMRETLEELNGIAKGLSKVLRDTNQM 104

Query: 22  ANASS 8
               S
Sbjct: 105 VRGGS 109


>ref|NP_001065428.1| Os10g0566900 [Oryza sativa Japonica Group]
           gi|18855001|gb|AAL79693.1|AC087599_12 hypothetical
           protein [Oryza sativa Japonica Group]
           gi|31433571|gb|AAP55069.1| pentatricopeptide, putative,
           expressed [Oryza sativa Japonica Group]
           gi|113639960|dbj|BAF27265.1| Os10g0566900 [Oryza sativa
           Japonica Group] gi|215678750|dbj|BAG95187.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218185039|gb|EEC67466.1| hypothetical protein
           OsI_34696 [Oryza sativa Indica Group]
           gi|222613293|gb|EEE51425.1| hypothetical protein
           OsJ_32504 [Oryza sativa Japonica Group]
          Length = 194

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/65 (41%), Positives = 40/65 (61%)
 Frame = -3

Query: 202 VLQEPKSSGVLKGINGIKEEILGKQMLSLELILCFLKDTMSDFQGIVMSLEKIFRDGRHL 23
           VL+E K+ GVL+ +  I+E +LGKQM SLE+I   +++T+ +F  I  SL K  RD   +
Sbjct: 45  VLEEVKNYGVLRCVPNIRENLLGKQMESLEIIFVSMRETVEEFNSIARSLHKALRDTNQM 104

Query: 22  ANASS 8
               S
Sbjct: 105 VRGGS 109


>ref|XP_002306984.1| predicted protein [Populus trichocarpa] gi|222856433|gb|EEE93980.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/61 (39%), Positives = 44/61 (72%)
 Frame = -3

Query: 205 KVLQEPKSSGVLKGINGIKEEILGKQMLSLELILCFLKDTMSDFQGIVMSLEKIFRDGRH 26
           KV+ +  + G LK ++GI + ++ KQ+ SL+ IL  +  T+ +F+G+V+++EK++RDGR 
Sbjct: 44  KVIGDCNNYGNLKSVDGIVDAVVRKQLESLQTILLSMNKTLEEFRGVVLTIEKMYRDGRQ 103

Query: 25  L 23
           L
Sbjct: 104 L 104


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