BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007867
         (1490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276502.1| PREDICTED: splicing factor U2af small subuni...   394   e-107
ref|XP_004145565.1| PREDICTED: splicing factor U2af small subuni...   382   e-103
ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, pu...   382   e-103
ref|XP_002458285.1| hypothetical protein SORBIDRAFT_03g030670 [S...   375   e-101
ref|XP_002300614.1| predicted protein [Populus trichocarpa] gi|2...   375   e-101

>ref|XP_002276502.1| PREDICTED: splicing factor U2af small subunit B isoform 1 [Vitis
           vinifera] gi|359491881|ref|XP_003634337.1| PREDICTED:
           splicing factor U2af small subunit B isoform 2 [Vitis
           vinifera]
          Length = 272

 Score =  394 bits (1011), Expect = e-107
 Identities = 197/276 (71%), Positives = 208/276 (75%)
 Frame = +2

Query: 158 MAEHLASIFGTEKDRVNCPFYFKIGACRHGERCSRLHNRPTISPTLLLSNMYQRPDMITP 337
           MAEHLASIFGTEKDRVNCPFYFKIGACRHG+RCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 338 GVDAQGQPIDPRKIQEHFEDFYEDIYEELHKFGEIESLNICDNLADHMVGNVYVQFTEED 517
           GVDAQGQPIDPRKIQEHFEDFYEDI+EEL KFGEIESLN+CDNLADHM+GNVYVQF EE+
Sbjct: 61  GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEEE 120

Query: 518 QAAAALKALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKQIGRDL 697
           QAAAAL+ALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVK IGRDL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180

Query: 698 RKKLYGXXXXXXXXXXXXXXXXXXXXXXXXEGLXXXXXXXXXXXXXXXSADRHGRYDSDG 877
           R+KL+G                                          S D+HG   SDG
Sbjct: 181 RRKLFGRYSGYGRSRSRSRSLSPRYRRDSDR--RRSGDRGDYRGNGRRSGDKHG---SDG 235

Query: 878 GRRRHGNPRHTXXXXXXXXXXXXXXXXXWNREREGR 985
           GRRRHG+PR +                 WNRERE R
Sbjct: 236 GRRRHGSPRRSRSPVREGSEERRARIELWNREREER 271


>ref|XP_004145565.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
           sativus] gi|449485076|ref|XP_004157064.1| PREDICTED:
           splicing factor U2af small subunit B-like [Cucumis
           sativus]
          Length = 276

 Score =  382 bits (982), Expect = e-103
 Identities = 194/278 (69%), Positives = 205/278 (73%), Gaps = 4/278 (1%)
 Frame = +2

Query: 158 MAEHLASIFGTEKDRVNCPFYFKIGACRHGERCSRLHNRPTISPTLLLSNMYQRPDMITP 337
           MAEHLASIFGTEKDRVNCPFYFKIGACRHG+RCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 338 GVDAQGQPIDPRKIQEHFEDFYEDIYEELHKFGEIESLNICDNLADHMVGNVYVQFTEED 517
           GVDAQGQPIDPRKIQEHFEDFYEDIYEEL KFGEIESLN+CDNLADHM+GNVYVQF EED
Sbjct: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120

Query: 518 QAAAALKALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKQIGRDL 697
           QAAAAL+ALQGRFYSGRPIIADFSPVTDFREATCRQ+EENNCNRGGYCNFMHVK IG+DL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180

Query: 698 RKKLYGXXXXXXXXXXXXXXXXXXXXXXXXEGLXXXXXXXXXXXXXXXSADRHGRYDSDG 877
           R+KL+G                                          S +RH   D DG
Sbjct: 181 RRKLFGRYRGYRASRSRSRSLSPRNRKEHDR--RERDYRDRDYRGNGRSKERH---DRDG 235

Query: 878 GRRRHGNPR----HTXXXXXXXXXXXXXXXXXWNRERE 979
           GRRR G+PR     +                 WNRERE
Sbjct: 236 GRRRQGSPRRSRSRSPVIVREGSEERRARIEQWNRERE 273


>ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
           communis] gi|223551442|gb|EEF52928.1| U2 snrnp auxiliary
           factor, small subunit, putative [Ricinus communis]
          Length = 272

 Score =  382 bits (980), Expect = e-103
 Identities = 193/276 (69%), Positives = 203/276 (73%), Gaps = 2/276 (0%)
 Frame = +2

Query: 158 MAEHLASIFGTEKDRVNCPFYFKIGACRHGERCSRLHNRPTISPTLLLSNMYQRPDMITP 337
           MAEHLASIFGTEKDRVNCPFYFKIGACRHG+RCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 338 GVDAQGQPIDPRKIQEHFEDFYEDIYEELHKFGEIESLNICDNLADHMVGNVYVQFTEED 517
           GVDAQGQPIDPRKIQEHFEDFYEDI+EEL KFGEIESLN+CDNLADHM+GNVYVQF EED
Sbjct: 61  GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120

Query: 518 QAAAALKALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKQIGRDL 697
           QAAAAL+ALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVK IGRDL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180

Query: 698 RKKLYG--XXXXXXXXXXXXXXXXXXXXXXXXEGLXXXXXXXXXXXXXXXSADRHGRYDS 871
           R+KL+G                          +                 S DRH     
Sbjct: 181 RRKLFGRYRGYRASRSRSRSVSPSRHRREKSNDRRERDYRDRDYRGNGRRSGDRH----- 235

Query: 872 DGGRRRHGNPRHTXXXXXXXXXXXXXXXXXWNRERE 979
              RRRHG+PR +                 WNRERE
Sbjct: 236 --DRRRHGSPRRSRSPVREGSEERRARIEQWNRERE 269


>ref|XP_002458285.1| hypothetical protein SORBIDRAFT_03g030670 [Sorghum bicolor]
           gi|241930260|gb|EES03405.1| hypothetical protein
           SORBIDRAFT_03g030670 [Sorghum bicolor]
          Length = 288

 Score =  375 bits (964), Expect = e-101
 Identities = 189/285 (66%), Positives = 203/285 (71%), Gaps = 11/285 (3%)
 Frame = +2

Query: 158 MAEHLASIFGTEKDRVNCPFYFKIGACRHGERCSRLHNRPTISPTLLLSNMYQRPDMITP 337
           MAEHLASIFGTEKDRVNCPFYFKIGACRHG+RCSRLHNRPTISPTL+L NMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLVNMYQRPDMITP 60

Query: 338 GVDAQGQPIDPRKIQEHFEDFYEDIYEELHKFGEIESLNICDNLADHMVGNVYVQFTEED 517
           GVDAQGQPIDPRK+QEHFEDFYEDIYEEL KFGEIE+LN+CDNLADHM+GNVYVQF EED
Sbjct: 61  GVDAQGQPIDPRKMQEHFEDFYEDIYEELSKFGEIENLNVCDNLADHMIGNVYVQFREED 120

Query: 518 QAAAALKALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKQIGRDL 697
           QAAAA  ALQGRFYSGRPI+ DFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK+IGRDL
Sbjct: 121 QAAAAHTALQGRFYSGRPIVVDFSPVTDFREATCRQYEENSCNRGGYCNFMHVKKIGRDL 180

Query: 698 RKKLYGXXXXXXXXXXXXXXXXXXXXXXXXE--------GLXXXXXXXXXXXXXXXSADR 853
           RKK++G                        +        G                   R
Sbjct: 181 RKKMFGHYKRPYRGRSRSPSPHHRRERRDRDDYRGAGGGGGRGRDDYRGGGGGRRGGGSR 240

Query: 854 HGRYDSDGGRRRHGN---PRHTXXXXXXXXXXXXXXXXXWNRERE 979
           H RYD DGGRRRHG    PR                   WNRER+
Sbjct: 241 HERYD-DGGRRRHGGSPPPRRARSPVRESSEERRAKIEQWNRERD 284


>ref|XP_002300614.1| predicted protein [Populus trichocarpa] gi|222842340|gb|EEE79887.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  375 bits (963), Expect = e-101
 Identities = 187/276 (67%), Positives = 204/276 (73%), Gaps = 2/276 (0%)
 Frame = +2

Query: 158 MAEHLASIFGTEKDRVNCPFYFKIGACRHGERCSRLHNRPTISPTLLLSNMYQRPDMITP 337
           MAEHLASIFGTEKDRVNCPFYFKIGACRHG+RCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 338 GVDAQGQPIDPRKIQEHFEDFYEDIYEELHKFGEIESLNICDNLADHMVGNVYVQFTEED 517
           GVDAQGQP+DP KIQEHFE+FYEDI+EEL+KFGEIESLN+CDNLADHM+GNVYV F EED
Sbjct: 61  GVDAQGQPLDPHKIQEHFEEFYEDIFEELNKFGEIESLNVCDNLADHMIGNVYVLFKEED 120

Query: 518 QAAAALKALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKQIGRDL 697
           QAAAAL+ALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVK IGRDL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180

Query: 698 RKKLYGXXXXXXXXXXXXXXXXXXXXXXXXEGLXXXXXXXXXXXXXXXSAD--RHGRYDS 871
           R+KL+G                        +                   +  R+ +YD 
Sbjct: 181 RRKLFGRYRGYRVSRSRSRSVSPRKRERDYDRRERDYRDRDRDRDRDYRGNGRRNDKYDR 240

Query: 872 DGGRRRHGNPRHTXXXXXXXXXXXXXXXXXWNRERE 979
           +GGR+RHG+                     WNRERE
Sbjct: 241 EGGRKRHGS------TVREGSEERRARIEQWNRERE 270