BLASTX nr result
ID: Coptis21_contig00007864
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00007864
(1248 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277104.1| PREDICTED: ATP-dependent Clp protease proteo... 454 e-125
ref|NP_001242516.1| uncharacterized protein LOC100798621 [Glycin... 438 e-120
ref|XP_003535918.1| PREDICTED: ATP-dependent Clp protease proteo... 432 e-119
ref|XP_002889406.1| hypothetical protein ARALYDRAFT_887394 [Arab... 430 e-118
ref|NP_563657.1| ATP-dependent Clp protease, protease subunit [A... 430 e-118
>ref|XP_002277104.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 5,
chloroplastic isoform 1 [Vitis vinifera]
gi|297743987|emb|CBI36957.3| unnamed protein product
[Vitis vinifera]
Length = 289
Score = 454 bits (1167), Expect = e-125
Identities = 239/294 (81%), Positives = 253/294 (86%), Gaps = 17/294 (5%)
Frame = -1
Query: 1029 MAHSCVSSLRFNSLIFSSTCSTPNSTESNKLSLP------LFPPNLRKSFSPTKAVYS-- 874
MAH+CV+ FNSLIFSS + +S++S+KLS L R +P KA YS
Sbjct: 1 MAHTCVA---FNSLIFSS--NPTSSSDSHKLSFSSRKFTKLVGSEKRLRVAPVKAAYSGE 55
Query: 873 ---PDRNSRQGLWSIRDDVQVPF------YAQGGQGPPPMVQERFQSVISQLFQHRIIRC 721
PD+NSRQG WSIRDD+Q+P YAQGGQGPPPMVQERFQSV+SQLFQHRIIRC
Sbjct: 56 FWAPDKNSRQGTWSIRDDLQIPSSAYFPTYAQGGQGPPPMVQERFQSVVSQLFQHRIIRC 115
Query: 720 GGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVC 541
GGAVDDDMANIIVAQLLYLDAVDP KDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVC
Sbjct: 116 GGAVDDDMANIIVAQLLYLDAVDPDKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVC 175
Query: 540 VGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNG 361
VGLAASMGAFLLS GTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNG
Sbjct: 176 VGLAASMGAFLLSCGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNG 235
Query: 360 YLSYHTGQTLEKINQDTDRDFFMSAKEAKEYGLIDGVILNPLKALQPLPATADQ 199
YLSYHTGQ+LEKINQDTDRDFFMSAKEAKEYGLIDGVILNPLKAL+PL ATADQ
Sbjct: 236 YLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVILNPLKALKPLVATADQ 289
>ref|NP_001242516.1| uncharacterized protein LOC100798621 [Glycine max]
gi|255645951|gb|ACU23464.1| unknown [Glycine max]
Length = 304
Score = 438 bits (1127), Expect = e-120
Identities = 235/299 (78%), Positives = 253/299 (84%), Gaps = 23/299 (7%)
Frame = -1
Query: 1029 MAHSCV----SSLRFNSLIFSSTCSTPNSTESNKLSLPLFPPNLRKSF--------SPTK 886
MAH+ + SSLRFN L+ +ST S+ +S+ SN LS P NLRKS S K
Sbjct: 1 MAHTSLFTPSSSLRFNPLLLTSTPSS-SSSRSNNLSFPALSRNLRKSVEDRKINKKSAVK 59
Query: 885 AVY-----SPDRNSRQGLWSIRDDVQVPF------YAQGGQGPPPMVQERFQSVISQLFQ 739
AVY +P+R+SR G+WSIR D+QVP YAQG QGPPPMV ERFQSVISQLFQ
Sbjct: 60 AVYGDEFWTPERSSRPGIWSIRSDLQVPSSPYFPTYAQG-QGPPPMVAERFQSVISQLFQ 118
Query: 738 HRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRP 559
+RIIRCGGAVDDDMANIIVAQLLYLDAVDP KDIVMYVNSPGGSVTAGMAIFDTMRHIRP
Sbjct: 119 YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP 178
Query: 558 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH 379
DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH
Sbjct: 179 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH 238
Query: 378 KANLNGYLSYHTGQTLEKINQDTDRDFFMSAKEAKEYGLIDGVILNPLKALQPLPATAD 202
KANLNGYL+YHTGQ+L+KINQDTDRDFFMSAKEAKEYGLIDGVI+NPLKALQPL A A+
Sbjct: 239 KANLNGYLAYHTGQSLDKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLEAAAE 297
>ref|XP_003535918.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 5,
chloroplastic-like isoform 1 [Glycine max]
Length = 303
Score = 432 bits (1112), Expect = e-119
Identities = 231/289 (79%), Positives = 246/289 (85%), Gaps = 19/289 (6%)
Frame = -1
Query: 1011 SSLRFNSLIFSSTCSTPNSTESNKLSLPLFPPNLRKSF--------SPTKAVY-----SP 871
SSLRFNSL+ SST S+ S+ SN +S P N+RKS S KAVY +P
Sbjct: 11 SSLRFNSLLVSSTPSS--SSRSNSVSFPALSRNIRKSVEDRKINKNSAVKAVYGDEFWTP 68
Query: 870 DRNSRQGLWSIRDDVQVPF------YAQGGQGPPPMVQERFQSVISQLFQHRIIRCGGAV 709
R+S Q +WSIR D+QVP YAQG QGPPPMV ERFQSVISQLFQ+RIIRCGGAV
Sbjct: 69 ARSSPQDIWSIRSDLQVPSSPYFPTYAQG-QGPPPMVAERFQSVISQLFQYRIIRCGGAV 127
Query: 708 DDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLA 529
DDDMANIIVAQLLYLDAVDP KDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLA
Sbjct: 128 DDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLA 187
Query: 528 ASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSY 349
ASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYL+Y
Sbjct: 188 ASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAY 247
Query: 348 HTGQTLEKINQDTDRDFFMSAKEAKEYGLIDGVILNPLKALQPLPATAD 202
HTGQ+L+KINQDTDRDFFMSAKEAKEYGLIDGVI+NPLKALQPL A A+
Sbjct: 248 HTGQSLDKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLEAAAE 296
>ref|XP_002889406.1| hypothetical protein ARALYDRAFT_887394 [Arabidopsis lyrata subsp.
lyrata] gi|297335248|gb|EFH65665.1| hypothetical protein
ARALYDRAFT_887394 [Arabidopsis lyrata subsp. lyrata]
Length = 298
Score = 430 bits (1106), Expect = e-118
Identities = 235/299 (78%), Positives = 248/299 (82%), Gaps = 26/299 (8%)
Frame = -1
Query: 1029 MAHSCVS----SLRFNSLIFSSTCSTPNSTESNKLSLPLFPPNLRKSF-----------S 895
MAH+CVS SLRF + F S +S +S KLSLP P RK+ S
Sbjct: 1 MAHACVSTSASSLRFTAG-FVSASPNGSSFDSPKLSLPFEPLRSRKTKKLVSDRKNWKNS 59
Query: 894 PTKAVYS-----PDRNSRQGLWSIRDDVQVP------FYAQGGQGPPPMVQERFQSVISQ 748
KAVYS P+ S QG+WSIRDD+QVP YAQG QGPPPMVQERFQS+ISQ
Sbjct: 60 TPKAVYSGNLWTPEIPSPQGVWSIRDDLQVPSSPYFPVYAQG-QGPPPMVQERFQSIISQ 118
Query: 747 LFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRH 568
LFQ+RIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRH
Sbjct: 119 LFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRH 178
Query: 567 IRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEM 388
IRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEM
Sbjct: 179 IRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEM 238
Query: 387 LHHKANLNGYLSYHTGQTLEKINQDTDRDFFMSAKEAKEYGLIDGVILNPLKALQPLPA 211
LHHKANLNGYL+YHTGQ+LEKINQDTDRDFFMSAKEAKEYGLIDGVI+NPLKALQPL A
Sbjct: 239 LHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAA 297
>ref|NP_563657.1| ATP-dependent Clp protease, protease subunit [Arabidopsis thaliana]
gi|75313059|sp|Q9S834.1|CLPP5_ARATH RecName:
Full=ATP-dependent Clp protease proteolytic subunit 5,
chloroplastic; AltName: Full=Endopeptidase ClpP5;
Short=nClpP5; AltName: Full=nClpP1; Flags: Precursor
gi|9972387|gb|AAG10637.1|AC022521_15 ATP-dependent Clp
protease subunit ClpP [Arabidopsis thaliana]
gi|4887543|emb|CAB43488.1| ATP-dependent Clp protease
subunit ClpP [Arabidopsis thaliana]
gi|5360579|dbj|BAA82065.1| nClpP1 [Arabidopsis thaliana]
gi|21536639|gb|AAM60971.1| ATP-dependent Clp protease
proteolytic subunit ClpP5 [Arabidopsis thaliana]
gi|89274139|gb|ABD65590.1| At1g02560 [Arabidopsis
thaliana] gi|332189323|gb|AEE27444.1| ATP-dependent Clp
protease, protease subunit [Arabidopsis thaliana]
Length = 298
Score = 430 bits (1105), Expect = e-118
Identities = 235/299 (78%), Positives = 248/299 (82%), Gaps = 26/299 (8%)
Frame = -1
Query: 1029 MAHSCVS----SLRFNSLIFSSTCSTPNSTESNKLSLPLFPPNLRKSF-----------S 895
MAH+CVS SLRF + F S +S +S KLSLP P RK+ S
Sbjct: 1 MAHACVSTSASSLRFTAG-FVSASPNGSSFDSPKLSLPFEPLRSRKTNKLVSDRKNWKNS 59
Query: 894 PTKAVYS-----PDRNSRQGLWSIRDDVQVPF------YAQGGQGPPPMVQERFQSVISQ 748
KAVYS P+ S QG+WSIRDD+QVP YAQG QGPPPMVQERFQS+ISQ
Sbjct: 60 TPKAVYSGNLWTPEIPSPQGVWSIRDDLQVPSSPYFPAYAQG-QGPPPMVQERFQSIISQ 118
Query: 747 LFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRH 568
LFQ+RIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRH
Sbjct: 119 LFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRH 178
Query: 567 IRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEM 388
IRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEM
Sbjct: 179 IRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEM 238
Query: 387 LHHKANLNGYLSYHTGQTLEKINQDTDRDFFMSAKEAKEYGLIDGVILNPLKALQPLPA 211
LHHKANLNGYL+YHTGQ+LEKINQDTDRDFFMSAKEAKEYGLIDGVI+NPLKALQPL A
Sbjct: 239 LHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAA 297