BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007834
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23047.3| unnamed protein product [Vitis vinifera]              137   9e-31
ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265...   130   8e-29
gb|AEZ00900.1| putative RNA recognition motif-containing protein...   120   1e-25
gb|AFY26894.1| RNA-binding protein with multiple splicing [Morel...   114   8e-24
ref|XP_002436388.1| hypothetical protein SORBIDRAFT_10g001660 [S...   102   3e-20

>emb|CBI23047.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  137 bits (345), Expect = 9e-31
 Identities = 66/104 (63%), Positives = 84/104 (80%), Gaps = 2/104 (1%)
 Frame = +1

Query: 1   SYYSREDERASYRLVGETDNIGASYDRYLRSGQIPTY-GESGRSLGGGMIGHPADDMRMS 177
           SY+SREDERA++R + ++D+IGASYDRYLR+ Q+P+Y G+SGR L GG+  HP DD R+ 
Sbjct: 39  SYFSREDERAAHRSIRDSDSIGASYDRYLRNAQMPSYGGDSGRPLSGGITSHPVDDPRVV 98

Query: 178 GVRGFDPMGG-KSQNIGISGGKPEIPLPADASNTLFVEGLPGNC 306
           GVRG D     KSQ++G SGG+PE+PLP DAS+TLFVEGLP NC
Sbjct: 99  GVRGVDQGATVKSQSLGFSGGRPELPLPPDASSTLFVEGLPANC 142


>ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
          Length = 229

 Score =  130 bits (328), Expect = 8e-29
 Identities = 65/104 (62%), Positives = 83/104 (79%), Gaps = 2/104 (1%)
 Frame = +1

Query: 1   SYYSREDERASYRLVGETDNIGASYDRYLRSGQIPTY-GESGRSLGGGMIGHPADDMRMS 177
           SY+SREDERA++R + ++D+IGASYDRYLR+  +P+Y G+SGR L GG+  HP DD R+ 
Sbjct: 39  SYFSREDERAAHRSIRDSDSIGASYDRYLRNA-MPSYGGDSGRPLSGGITSHPVDDPRVV 97

Query: 178 GVRGFDPMGG-KSQNIGISGGKPEIPLPADASNTLFVEGLPGNC 306
           GVRG D     KSQ++G SGG+PE+PLP DAS+TLFVEGLP NC
Sbjct: 98  GVRGVDQGATVKSQSLGFSGGRPELPLPPDASSTLFVEGLPANC 141


>gb|AEZ00900.1| putative RNA recognition motif-containing protein, partial [Elaeis
           guineensis]
          Length = 294

 Score =  120 bits (301), Expect = 1e-25
 Identities = 61/115 (53%), Positives = 76/115 (66%), Gaps = 14/115 (12%)
 Frame = +1

Query: 4   YYSREDERASYRLVGETDNIGASYDRYLRSGQIPTYGESGRSLGGGMIGHPADDMRMSGV 183
           YYSR++ER  +R + +T++I ASYDRYLR+G     GES R++ GGM GHP DD RM GV
Sbjct: 78  YYSRDEERTGHRTIRDTESIAASYDRYLRNGVSFGAGESVRTVAGGMTGHPVDDRRMMGV 137

Query: 184 RGFD-------------PMGG-KSQNIGISGGKPEIPLPADASNTLFVEGLPGNC 306
            G D             P+GG   +++G  GG+PE PLP DASNTLFVEGLP NC
Sbjct: 138 GGMDGRTVGYGGGRPEPPLGGMDGRSVGYGGGRPEPPLPQDASNTLFVEGLPANC 192


>gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra]
          Length = 233

 Score =  114 bits (285), Expect = 8e-24
 Identities = 56/105 (53%), Positives = 74/105 (70%), Gaps = 3/105 (2%)
 Frame = +1

Query: 1   SYYSREDERASYRLVGETDNIGASYDRYLRSGQIPTY--GESGRSLGGGMIGHPADDMRM 174
           SY+SR+DER + R + +TD+IGASYDRYLRS Q+ +Y  G+S R + GGM     DD R+
Sbjct: 41  SYFSRDDERGTLRGMRDTDSIGASYDRYLRSAQVSSYGGGQSARPISGGMSSRAVDDPRI 100

Query: 175 SGVRGFDPMGG-KSQNIGISGGKPEIPLPADASNTLFVEGLPGNC 306
            G+   +P    K + +G  GG+PE+PLP DAS+TLFVEGLP NC
Sbjct: 101 VGMGSVEPATTVKDRTLGYGGGRPEVPLPPDASSTLFVEGLPSNC 145


>ref|XP_002436388.1| hypothetical protein SORBIDRAFT_10g001660 [Sorghum bicolor]
           gi|241914611|gb|EER87755.1| hypothetical protein
           SORBIDRAFT_10g001660 [Sorghum bicolor]
          Length = 266

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/106 (49%), Positives = 67/106 (63%), Gaps = 5/106 (4%)
 Frame = +1

Query: 4   YYSREDERASYRLVGETDNIGASYDRYLRSGQIPTYG-----ESGRSLGGGMIGHPADDM 168
           YY R++ERA YR   +T+ + ASY+R+LR+GQI ++G     E  R   GG  G+P DD 
Sbjct: 75  YYPRDEERAGYRPARDTEALNASYERFLRTGQIQSFGGGPAGEPIRPAVGGNAGYPVDDR 134

Query: 169 RMSGVRGFDPMGGKSQNIGISGGKPEIPLPADASNTLFVEGLPGNC 306
            M   RG D     S+NIG  GG PE PLP DASNTL++EG+P  C
Sbjct: 135 SMMAARGMD-----SRNIGFGGGMPEPPLPPDASNTLYIEGIPTGC 175