BLASTX nr result

ID: Coptis21_contig00007829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007829
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331547.1| predicted protein [Populus trichocarpa] gi|2...   179   3e-43
ref|XP_002331548.1| predicted protein [Populus trichocarpa] gi|2...   172   5e-41
ref|XP_004145194.1| PREDICTED: uncharacterized protein LOC101214...   170   2e-40
ref|XP_002518440.1| conserved hypothetical protein [Ricinus comm...   168   7e-40
ref|XP_002529453.1| conserved hypothetical protein [Ricinus comm...   166   3e-39

>ref|XP_002331547.1| predicted protein [Populus trichocarpa] gi|222873771|gb|EEF10902.1|
           predicted protein [Populus trichocarpa]
          Length = 155

 Score =  179 bits (455), Expect = 3e-43
 Identities = 84/156 (53%), Positives = 108/156 (69%), Gaps = 1/156 (0%)
 Frame = -3

Query: 546 MKLLNLVFVAIVFMSLFFNGAFTLIEDHGDDEDALVDEVGEGM-INTLDENEEPSSLGGE 370
           MKLL++ FV  + M+L  +   T  E+     D   +E  E   +  L+  E  SSL G 
Sbjct: 1   MKLLDIFFVLAIIMALAVSLTATPSEEDQSSLDFSENEDEENFDLPWLESQETTSSLRGA 60

Query: 369 SRFLYQQKQKSKLTCNKYPRICRAKGSPGPDCCKKKCVNVMTDRQNCGFCGNRCGYSQIC 190
           +RFL  QK ++ +TC+KYPR CRAKGSPGPDCCKKKCVNVMTDR NCG CG +C Y +IC
Sbjct: 61  NRFL-AQKIRAVMTCDKYPRACRAKGSPGPDCCKKKCVNVMTDRLNCGMCGKKCKYPEIC 119

Query: 189 CRGNCVNPRNDRKNCGGCNIRCKRGDFCSYGMCNYA 82
           C+G CVNP +++KNCGGC+ +CK+G  C YGMC+YA
Sbjct: 120 CKGQCVNPMSNKKNCGGCSNKCKKGSKCQYGMCSYA 155


>ref|XP_002331548.1| predicted protein [Populus trichocarpa] gi|222873772|gb|EEF10903.1|
           predicted protein [Populus trichocarpa]
          Length = 152

 Score =  172 bits (436), Expect = 5e-41
 Identities = 81/159 (50%), Positives = 107/159 (67%), Gaps = 4/159 (2%)
 Frame = -3

Query: 546 MKLLNLVFVAIVFMSLFFNGAFTLIEDHG----DDEDALVDEVGEGMINTLDENEEPSSL 379
           MK L + F+  + MSL    + T  E+      D+ED    ++ +     L+  E  SSL
Sbjct: 1   MKYLKIFFLLAMLMSLAIILSATTPEEESFLDFDNEDEENSDLPQ-----LENQETTSSL 55

Query: 378 GGESRFLYQQKQKSKLTCNKYPRICRAKGSPGPDCCKKKCVNVMTDRQNCGFCGNRCGYS 199
            G +RFL Q +  + +TC+KYPR CRAKGSPGPDCCKKKCVNVMTD+ NCG CG +C Y 
Sbjct: 56  RGANRFLAQTR--AVMTCDKYPRACRAKGSPGPDCCKKKCVNVMTDKLNCGMCGKKCKYP 113

Query: 198 QICCRGNCVNPRNDRKNCGGCNIRCKRGDFCSYGMCNYA 82
           +ICC+G CVNP +++KNCGGC+ +CK+G  C YGMC+YA
Sbjct: 114 EICCKGQCVNPMSNKKNCGGCSNKCKKGSTCQYGMCSYA 152


>ref|XP_004145194.1| PREDICTED: uncharacterized protein LOC101214260 [Cucumis sativus]
           gi|449472078|ref|XP_004153490.1| PREDICTED:
           uncharacterized protein LOC101209985 [Cucumis sativus]
           gi|449503393|ref|XP_004161980.1| PREDICTED:
           uncharacterized protein LOC101227666 [Cucumis sativus]
          Length = 157

 Score =  170 bits (431), Expect = 2e-40
 Identities = 77/156 (49%), Positives = 102/156 (65%)
 Frame = -3

Query: 549 IMKLLNLVFVAIVFMSLFFNGAFTLIEDHGDDEDALVDEVGEGMINTLDENEEPSSLGGE 370
           I+KL   + +AI+F S + + A  +  +  ++   L D+     + ++++ + P  L   
Sbjct: 3   IVKLFLFLVLAIIF-SHYASHAAEVETNSKENATNLSDDEVSNHLASIEDEDSPLGLARR 61

Query: 369 SRFLYQQKQKSKLTCNKYPRICRAKGSPGPDCCKKKCVNVMTDRQNCGFCGNRCGYSQIC 190
             F +Q  QK  LTCNKYPR+CR KGS GPDCCKKKCVNV  DR NCG CG +C YS+IC
Sbjct: 62  LLFPFQSLQKGLLTCNKYPRVCRRKGSAGPDCCKKKCVNVERDRNNCGRCGKKCKYSKIC 121

Query: 189 CRGNCVNPRNDRKNCGGCNIRCKRGDFCSYGMCNYA 82
           C+G CVNP  +RK+CGGCNI C +G FC YGMC YA
Sbjct: 122 CKGKCVNPLFNRKHCGGCNIECSKGSFCVYGMCGYA 157


>ref|XP_002518440.1| conserved hypothetical protein [Ricinus communis]
           gi|223542285|gb|EEF43827.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 159

 Score =  168 bits (426), Expect = 7e-40
 Identities = 79/159 (49%), Positives = 103/159 (64%), Gaps = 1/159 (0%)
 Frame = -3

Query: 555 FIIMKLLNLVFVAIVFMSLFFNGAFTLIE-DHGDDEDALVDEVGEGMINTLDENEEPSSL 379
           F ++  + + F A V  S       T +E D G  +D          +N   E    SSL
Sbjct: 7   FFLLLAMLMAFAASVLSSTAPTEEETFLENDDGSTDD------DTPWLNQDRETTLTSSL 60

Query: 378 GGESRFLYQQKQKSKLTCNKYPRICRAKGSPGPDCCKKKCVNVMTDRQNCGFCGNRCGYS 199
            G +RFL Q+  ++ +TC+KYPR+CRAKGSPGPDCCKKKCVNVMTD  NCG CG +C Y 
Sbjct: 61  RGANRFLAQKTSQAVMTCDKYPRVCRAKGSPGPDCCKKKCVNVMTDGLNCGNCGKKCKYP 120

Query: 198 QICCRGNCVNPRNDRKNCGGCNIRCKRGDFCSYGMCNYA 82
           +ICC+G CVNP ++ K+CGGCN +CK+G+ C YGMC+YA
Sbjct: 121 EICCKGGCVNPMSNNKHCGGCNNKCKKGNKCVYGMCSYA 159


>ref|XP_002529453.1| conserved hypothetical protein [Ricinus communis]
           gi|223531069|gb|EEF32919.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 158

 Score =  166 bits (420), Expect = 3e-39
 Identities = 75/158 (47%), Positives = 105/158 (66%), Gaps = 3/158 (1%)
 Frame = -3

Query: 546 MKLLNLVFVAIVFMSLFFNGAFTLIEDHGDDEDALVDEVGEGMIN-TLDENEEPSSLGGE 370
           M LL +  + ++ M+L  + A   +E   +D +   +++   +   + DE  E +S  G 
Sbjct: 1   MNLLKIFLILVLVMALLLSVAALPLEQEQEDLEPEQEDLDYDLTEQSFDEETEFNSEHGF 60

Query: 369 SRFLYQQKQKS--KLTCNKYPRICRAKGSPGPDCCKKKCVNVMTDRQNCGFCGNRCGYSQ 196
              L Q+K K   +++CNK+PRIC AKGSPGP CCKKKCVNV+TDR NCG CG +C Y+Q
Sbjct: 61  RHLLAQKKVKKARRVSCNKFPRICHAKGSPGPYCCKKKCVNVLTDRLNCGACGKKCKYNQ 120

Query: 195 ICCRGNCVNPRNDRKNCGGCNIRCKRGDFCSYGMCNYA 82
           ICC G CVNP  +R++CGGCN RC  G+FC++G+CNYA
Sbjct: 121 ICCNGKCVNPSFNRRHCGGCNNRCNSGEFCAFGLCNYA 158


Top