BLASTX nr result

ID: Coptis21_contig00007812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007812
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513776.1| conserved hypothetical protein [Ricinus comm...   101   6e-20
ref|XP_002285840.1| PREDICTED: selenoprotein K [Vitis vinifera] ...   100   1e-19
ref|XP_002301002.1| predicted protein [Populus trichocarpa] gi|1...   100   1e-19
ref|XP_002307425.1| predicted protein [Populus trichocarpa] gi|1...   100   2e-19
ref|XP_004140863.1| PREDICTED: selenoprotein K-like [Cucumis sat...    99   3e-19

>ref|XP_002513776.1| conserved hypothetical protein [Ricinus communis]
           gi|223546862|gb|EEF48359.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 100

 Score =  101 bits (252), Expect = 6e-20
 Identities = 56/102 (54%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
 Frame = +2

Query: 83  MAYVERGVVQSKRSIWRLRTITDXXXXXXXXXXXXXGTLFSMEKSDAYKK---SGKKWDX 253
           MAYVERGVV+SK+SIWRLRTITD              T+FSMEKSDAY+K   S KKWD 
Sbjct: 1   MAYVERGVVKSKKSIWRLRTITDFFWAIINFIGVFFSTMFSMEKSDAYRKGSGSSKKWD- 59

Query: 254 XXXXXXXXXXXXXXXXXXXXXXMDNVRGIDHSSLPACGSCCG 379
                                 +DNVRGIDHSSLPACGSCCG
Sbjct: 60  -GGPGGPGSGPYGGGPRGPPRGLDNVRGIDHSSLPACGSCCG 100


>ref|XP_002285840.1| PREDICTED: selenoprotein K [Vitis vinifera]
           gi|147801093|emb|CAN71044.1| hypothetical protein
           VITISV_015657 [Vitis vinifera]
          Length = 102

 Score =  100 bits (250), Expect = 1e-19
 Identities = 56/102 (54%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
 Frame = +2

Query: 83  MAYVERGVVQSKRSIWRLRTITDXXXXXXXXXXXXXGTLFSMEKSDAYKKS---GKKWDX 253
           MAYVERGVV+S RSIWRLRTITD              T+FSMEKSDAY+KS   GKKWD 
Sbjct: 1   MAYVERGVVKSNRSIWRLRTITDFFWAIVNFIGVFFVTMFSMEKSDAYRKSSGSGKKWDG 60

Query: 254 XXXXXXXXXXXXXXXXXXXXXXMDNVRGIDHSSLPACGSCCG 379
                                 +DNVRGIDHS+LPACGSCCG
Sbjct: 61  GGPGGPGRGPYGGGPRGPPRG-LDNVRGIDHSALPACGSCCG 101


>ref|XP_002301002.1| predicted protein [Populus trichocarpa] gi|118481555|gb|ABK92720.1|
           unknown [Populus trichocarpa]
           gi|222842728|gb|EEE80275.1| predicted protein [Populus
           trichocarpa]
          Length = 100

 Score =  100 bits (249), Expect = 1e-19
 Identities = 55/102 (53%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
 Frame = +2

Query: 83  MAYVERGVVQSKRSIWRLRTITDXXXXXXXXXXXXXGTLFSMEKSDAYKK---SGKKWDX 253
           MAYVERGV++SKRSIWRLRTITD              T+FSMEK+DAY+K   S KKWD 
Sbjct: 1   MAYVERGVLKSKRSIWRLRTITDFFWAIVNLIGVFFSTMFSMEKTDAYRKGSGSSKKWD- 59

Query: 254 XXXXXXXXXXXXXXXXXXXXXXMDNVRGIDHSSLPACGSCCG 379
                                 +DNVRGIDHSSLPACGSCCG
Sbjct: 60  -GGPGGPGSGPYGGGPRGPPRGLDNVRGIDHSSLPACGSCCG 100


>ref|XP_002307425.1| predicted protein [Populus trichocarpa] gi|118485451|gb|ABK94582.1|
           unknown [Populus trichocarpa]
           gi|222856874|gb|EEE94421.1| predicted protein [Populus
           trichocarpa]
          Length = 100

 Score =  100 bits (248), Expect = 2e-19
 Identities = 55/102 (53%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
 Frame = +2

Query: 83  MAYVERGVVQSKRSIWRLRTITDXXXXXXXXXXXXXGTLFSMEKSDAYKK---SGKKWDX 253
           MAYVERGVV+S+RSIWRLRTITD              T+FSMEK+DAY+K   S KKWD 
Sbjct: 1   MAYVERGVVKSQRSIWRLRTITDFFWAIVNFIGVFFSTMFSMEKTDAYRKGSGSSKKWD- 59

Query: 254 XXXXXXXXXXXXXXXXXXXXXXMDNVRGIDHSSLPACGSCCG 379
                                 +DNVRGIDHSSLPACGSCCG
Sbjct: 60  -GGPGGPGSGPYGGGPRGPPRGLDNVRGIDHSSLPACGSCCG 100


>ref|XP_004140863.1| PREDICTED: selenoprotein K-like [Cucumis sativus]
           gi|449522556|ref|XP_004168292.1| PREDICTED:
           selenoprotein K-like [Cucumis sativus]
          Length = 101

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 55/102 (53%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
 Frame = +2

Query: 83  MAYVERGVVQSKRSIWRLRTITDXXXXXXXXXXXXXGTLFSMEKSDAYKK---SGKKWDX 253
           MAYVERGVV+S+RS WRL+TITD              TLFSMEKS+AY+K   SGKKWD 
Sbjct: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWD- 59

Query: 254 XXXXXXXXXXXXXXXXXXXXXXMDNVRGIDHSSLPACGSCCG 379
                                 +DNVRGIDHSSLPACGSCCG
Sbjct: 60  GGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 101


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