BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007810
         (1116 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_177996.1| F-box/FBD/LRR-repeat protein [Arabidopsis thali...    69   3e-09
emb|CBI27434.3| unnamed protein product [Vitis vinifera]               64   9e-08
ref|XP_002319944.1| f-box family protein [Populus trichocarpa] g...    62   2e-07
ref|XP_003540862.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    61   4e-07
ref|NP_001190533.1| F-box/RNI-like/FBD-like domains-containing p...    60   7e-07

>ref|NP_177996.1| F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
            gi|75268062|sp|Q9ZV93.1|FDL10_ARATH RecName:
            Full=F-box/FBD/LRR-repeat protein At1g78750
            gi|3834319|gb|AAC83035.1| Similar to gi|2244754 heat
            shock transcription factor HSF30 homolog from Arabidopsis
            thaliana chromosome 4 contig gb|Z97335 [Arabidopsis
            thaliana] gi|332198025|gb|AEE36146.1|
            F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
          Length = 458

 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 80/302 (26%), Positives = 128/302 (42%), Gaps = 20/302 (6%)
 Frame = -3

Query: 1114 FTCRTLVVLELFNVRLKLPSLIRIPLLKSLKLSIVRLFDQNLTNKFLSSCCCPVLESLSM 935
            +TC TLV L L  + L  P  + +P LK L LSIV+  D       +S   CPVLE+L++
Sbjct: 150  YTCETLVYLTLDGLSLASPKFVSLPSLKELHLSIVKFADHMALETLISQ--CPVLENLNI 207

Query: 934  T---------CCARDHNFSVTLSFSHXXXXXXXXXXXXXXXXXXLSITDFHISSINGKEN 782
                       C R  +    LSF+H                    +    +S  +   +
Sbjct: 208  NRSFCDDFEFTCVRSQSL---LSFTHVADTDEMLNEDLVVAIDAPKLKYLRLSD-HRIAS 263

Query: 781  FSIQNLSSVSIARI---------RLFPPSTSSNDANNEFCDNYARKILSGLHNVKKLSFE 629
            F + +L+S+  A I         ++F P    ND N     N  R  L G+ ++K L   
Sbjct: 264  FILNDLASLVEADIDTVFNLICKKMFNP----NDLNKR---NMIRDFLVGISSIKTLIIA 316

Query: 628  GSFVELVTRDRELPTLQACCSLKHLQLDMHATKNQVQAITLLLRIYPNLQTLDILCYQGA 449
             S +E++        L    +L  L++D +  K ++  + + L   PNL++L +      
Sbjct: 317  SSTLEVIYDYSRCEPLPLFRNLSSLRVDFYGYKWEM--LPIFLESCPNLKSLVV------ 368

Query: 448  SPSSNKLNMEEYWRTKELST-RDILKRLKEVQI-RLHKGAEIELDLVRYLLGSADNLEKM 275
                   N  E      LS  R  L  L+ V+I R  KG  +E+ LV YLL ++  L+K+
Sbjct: 369  ----GSANYREKEGINILSVPRGFLSSLEYVKIERPLKGEAMEMKLVSYLLENSTILKKL 424

Query: 274  SI 269
            ++
Sbjct: 425  TL 426


>emb|CBI27434.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score = 63.5 bits (153), Expect = 9e-08
 Identities = 50/174 (28%), Positives = 90/174 (51%), Gaps = 7/174 (4%)
 Frame = -3

Query: 673 KILSGLHNVKKLSFEGSFVELVTRD---RELPTLQACCSLKHLQLDMHATKNQVQAITLL 503
           KI   L  V+KL  EG F+E +      + LP L     + HL     +  +++     L
Sbjct: 285 KIGRSLPAVEKLYLEGYFLEFLALGNVPKRLPILFNNLKVLHLDEMDFSNLDEILCSLCL 344

Query: 502 LRIYPNLQTLDILCYQGASPSSNKLNMEEYWRTKELSTRDILKRLKEVQIRLHKGAEIEL 323
           +   PNL+ L ++ Y G      +  + EY+ T+ LS    LKRL++V++      E EL
Sbjct: 345 ITSSPNLEELRVVAYAG---DIARDAVVEYFGTQNLSHHS-LKRLQKVKMEEISNFEPEL 400

Query: 322 DLVRYLLGSADNLEKMSI----EFLGDNENRMRISMKLLTFTRVSPNAAIFFLE 173
           + ++++L S+ +LE+M +    + +G++E +M    +L+ F R SP A + +L+
Sbjct: 401 EFIKFILASSPSLEEMEVLRSEDTVGEDERKM--WKELMRFRRASPKAEVIYLQ 452


>ref|XP_002319944.1| f-box family protein [Populus trichocarpa]
            gi|222858320|gb|EEE95867.1| f-box family protein [Populus
            trichocarpa]
          Length = 511

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 78/335 (23%), Positives = 134/335 (40%), Gaps = 43/335 (12%)
 Frame = -3

Query: 1051 IRIPLLKSLKLSIVRLFDQN-------------LTNKFLSSC--------CCPVLESLSM 935
            I  P L +L LS+V L++Q+             L N  L +C        CC  LE L++
Sbjct: 181  IGFPSLHTLSLSLVILYEQSSLLDLFTESSFPCLKNLNLDACFGMKHLKVCCRALEDLTI 240

Query: 934  TCCARDHNFSV------TLSFSHXXXXXXXXXXXXXXXXXXLSITDFHISSINGKENFSI 773
              C + H+  +       L  +                     I+ +  +SI      S+
Sbjct: 241  ENCFQLHSLDICSAKLENLRVASCFDAYSDKTWFKVNAPRLRGIS-WEYNSITASS--SL 297

Query: 772  QNLSSVSIARIRLFPPSTSSNDANNEFCDNYARKILSGLHNVKKLSFEGSFVELVTRDRE 593
             NL+S+  A +       + +    +   N+    LSGL +V  L+ +   VE+++   +
Sbjct: 298  VNLTSLHEASVGFSLLHENLSVEKLQSVCNF----LSGLSHVHSLTLDSQCVEILSNKND 353

Query: 592  LPTL-QACCSLKHLQLDMHATKNQVQAITLLLRIYPNLQTLDILCYQGASPSSNKLNM-- 422
            +  L     +LK L+L     KN V  +  L R  P L TL +           + N   
Sbjct: 354  IINLLHPFNNLKVLELHTGFEKNNVPGLAFLFRSSPTLHTLILKIINDFKTERRQWNRDL 413

Query: 421  --------EEYWRTKELSTRDILKRLKEVQIRLHKGAEIELDLVRYLLGSADNLEKMSIE 266
                    E+YW ++  + R  L  LK V+I      E E+ L ++LL    +L++M++ 
Sbjct: 414  WDLSTSAEEQYWESQLQALRPFLDHLKVVKIHGFLECENEVSLAKFLLKHGKDLQEMTLC 473

Query: 265  FLG-----DNENRMRISMKLLTFTRVSPNAAIFFL 176
                    D+  R ++  +++ F+  S NA I FL
Sbjct: 474  TANCCNFKDSLRRQKVRSQIMGFSWASSNAKIVFL 508


>ref|XP_003540862.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At4g03220-like
           [Glycine max]
          Length = 510

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 24/216 (11%)
 Frame = -3

Query: 754 SIARIRLFPPSTSSNDANNEFC----DNYARKI------LSGLHNVKKLSFEGSFVELVT 605
           +I  + +F PS   N+    F     DN   K+      LSGL + + LS E   +E+++
Sbjct: 296 AITDMTMFGPSNLLNEVTVGFYVFTRDNILGKLQSAIDLLSGLSHARSLSLERQTIEILS 355

Query: 604 RDRELPTLQACCSLKHLQLDMHATKNQVQAITLLLRIYPNLQTLDILCYQGASPSSNKLN 425
            +  L   Q   +LKHL+L     K+ V  +T L +  P L TL +           + N
Sbjct: 356 NNHLL--FQPFYNLKHLELHTGFNKSDVPGLTCLFKSSPTLDTLILKIIHEYRIERKEWN 413

Query: 424 M----------EEYWRTKELSTRDILKRLKEVQIRLHKGAEIELDLVRYLLGSADNLEKM 275
                      E+YW ++  +    L+ LK V+I      E E+ L ++LL     LE+M
Sbjct: 414 RDLWDMTITEGEQYWESQIRTLESFLQHLKVVKIHGFLDYENEVALAKFLLKHGKALEEM 473

Query: 274 SIEF----LGDNENRMRISMKLLTFTRVSPNAAIFF 179
            +        D   R +I  +++ F+  S NA + F
Sbjct: 474 ILHTGHCNARDTLRRQKIRSQMMGFSWASSNAKVAF 509


>ref|NP_001190533.1| F-box/RNI-like/FBD-like domains-containing protein [Arabidopsis
            thaliana] gi|75262547|sp|Q9FJC1.1|FBD31_ARATH RecName:
            Full=Putative FBD-associated F-box protein At5g53635
            gi|9759202|dbj|BAB09739.1| heat shock transcription
            factor HSF30-like protein [Arabidopsis thaliana]
            gi|332009006|gb|AED96389.1| F-box/RNI-like/FBD-like
            domains-containing protein [Arabidopsis thaliana]
          Length = 426

 Score = 60.5 bits (145), Expect = 7e-07
 Identities = 74/327 (22%), Positives = 130/327 (39%), Gaps = 14/327 (4%)
 Frame = -3

Query: 1114 FTCRTLVVLELFNVRLKLPSLIRIPLLKSLKLSIVRLFDQNLTNKFLSSCCCPVLESLSM 935
            + C TLV L+L  V L     + +P LK++ L  V   ++    +F+S  CCPVLE L +
Sbjct: 124  YICETLVYLKLCRVMLDDAEFVSLPCLKTIHLEYVWFPNEANLERFVS--CCPVLEELKI 181

Query: 934  TCCARDHNFSVTLSFSHXXXXXXXXXXXXXXXXXXLSITDFHISSI-------------N 794
              C  ++  ++ L                       S+ DFH   +             N
Sbjct: 182  YGCGNENAITLRL---------LSRSLKKLSINILKSMCDFHSEVVIDAPLLSYLKINDN 232

Query: 793  GKENFSIQNLSSVSIARIRLFPPSTSSNDANNEFCDNYARKILSGLHNVKKLSFEGSFVE 614
              E + + NL S +   I L       ++A+     +     L G+  V  ++      +
Sbjct: 233  VSERYIVNNLESNAKLDISLPFGLLDFDEASVSSRTDSIHSFLRGILKVSDMTIWVDTFK 292

Query: 613  LVTRDRELPTLQACCSLKHLQLDMHATKNQVQAITLLLRIYPNLQTLDILCYQGASPSSN 434
            L+ +  EL +L     +  L + +      ++ +   L   PNL++L ++C      +  
Sbjct: 293  LICKYSELESLPRFGYMSRLHVTL--CIYDLKWLPTFLESCPNLKSLILVC---VGDNDE 347

Query: 433  KLNMEEYWRTKELSTRDILKRLKEVQIRLHKGAEIE-LDLVRYLLGSADNLEKMSIEFLG 257
             L+ E       L    +L  L+ V IR+     +E + LVRY L ++  L+K+S++   
Sbjct: 348  MLSEEMIQFGSSLVPECLLSSLEFVDIRIPFRGHLEVMKLVRYFLENSAILKKLSLDH-- 405

Query: 256  DNENRMRISMKLLTFTRVSPNAAIFFL 176
                   I  KL T  R S    + F+
Sbjct: 406  ------DIFKKLFTIPRRSTKCQVVFI 426