BLASTX nr result

ID: Coptis21_contig00007792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007792
         (1608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152502.1| PREDICTED: probable pectate lyase 22-like [C...   671   0.0  
ref|XP_004157771.1| PREDICTED: LOW QUALITY PROTEIN: probable pec...   670   0.0  
ref|XP_003608909.1| Pectate lyase [Medicago truncatula] gi|35550...   669   0.0  
gb|AFK44189.1| unknown [Medicago truncatula]                          665   0.0  
ref|XP_002275781.1| PREDICTED: probable pectate lyase 5-like [Vi...   664   0.0  

>ref|XP_004152502.1| PREDICTED: probable pectate lyase 22-like [Cucumis sativus]
          Length = 413

 Score =  671 bits (1731), Expect = 0.0
 Identities = 321/382 (84%), Positives = 340/382 (89%), Gaps = 1/382 (0%)
 Frame = -1

Query: 1491 VQNPDLVAQEVVSKINNST-RRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFG 1315
            V NP+LV QEV   I N+T RRNLGYLSCGTGNPIDDCWRCD NWEKNRQRLADC IGFG
Sbjct: 33   VSNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDCWRCDSNWEKNRQRLADCGIGFG 92

Query: 1314 KQAIGGRDGRIYVVTDSANDDPVTPKPGTLRHAVIQDEPLWIIFERDMVIKLKEELIMNS 1135
            K AIGGRDG+IYVVTDS +DDPV PKPGTLR+AVIQDEPLWIIF RDMVI+LKEELIMNS
Sbjct: 93   KNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVIRLKEELIMNS 152

Query: 1134 FKTIDGRGASVHIAGGPCITIQFVTNIIIHGLHIHDCTQGGNTNVRDSPRHFGFRTLSDG 955
            FKTIDGRGASVHIAGGPCITIQ+VTNIIIHGL+IHDC QGGNT+VRDSPRHFGFRT+SDG
Sbjct: 153  FKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQGGNTDVRDSPRHFGFRTISDG 212

Query: 954  DGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYLTHHNKVMLLGHSDTYTQD 775
            DGVSIFGGSHVWVDHCSLSNC DGLIDAIHGSTAITISNNY+THH+KVMLLGHSD+YTQD
Sbjct: 213  DGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQD 272

Query: 774  KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLA 595
            KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRF+A
Sbjct: 273  KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFVA 332

Query: 594  PNDMNSKEITKHEDAPVYEWKNWNWRSEGDLYLNGAFFTPXXXXXXXXXXXXXXXXXARP 415
            PND  SKE+TK+EDAP  EWKNW+WRSEGDL LNGA+FT                  ARP
Sbjct: 333  PNDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAYFT-ASGAGASSSYARASSLGARP 391

Query: 414  SSLVTPLTIAAGALNCRKGSRC 349
            SSLV  +T  AGALNCRKGSRC
Sbjct: 392  SSLVGTITTNAGALNCRKGSRC 413


>ref|XP_004157771.1| PREDICTED: LOW QUALITY PROTEIN: probable pectate lyase 22-like
            [Cucumis sativus]
          Length = 413

 Score =  670 bits (1728), Expect = 0.0
 Identities = 321/382 (84%), Positives = 339/382 (88%), Gaps = 1/382 (0%)
 Frame = -1

Query: 1491 VQNPDLVAQEVVSKINNST-RRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFG 1315
            V NP+LV QEV   I N+T RRNLGYLSCGTGNPIDDCWRCD NWEKNRQRLADC IGFG
Sbjct: 33   VSNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDCWRCDSNWEKNRQRLADCGIGFG 92

Query: 1314 KQAIGGRDGRIYVVTDSANDDPVTPKPGTLRHAVIQDEPLWIIFERDMVIKLKEELIMNS 1135
            K AIGGRDG IYVVTDS +DDPV PKPGTLR+AVIQDEPLWIIF RDMVI+LKEELIMNS
Sbjct: 93   KNAIGGRDGXIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVIRLKEELIMNS 152

Query: 1134 FKTIDGRGASVHIAGGPCITIQFVTNIIIHGLHIHDCTQGGNTNVRDSPRHFGFRTLSDG 955
            FKTIDGRGASVHIAGGPCITIQ+VTNIIIHGL+IHDC QGGNT+VRDSPRHFGFRT+SDG
Sbjct: 153  FKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQGGNTDVRDSPRHFGFRTISDG 212

Query: 954  DGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYLTHHNKVMLLGHSDTYTQD 775
            DGVSIFGGSHVWVDHCSLSNC DGLIDAIHGSTAITISNNY+THH+KVMLLGHSD+YTQD
Sbjct: 213  DGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQD 272

Query: 774  KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLA 595
            KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRF+A
Sbjct: 273  KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFVA 332

Query: 594  PNDMNSKEITKHEDAPVYEWKNWNWRSEGDLYLNGAFFTPXXXXXXXXXXXXXXXXXARP 415
            PND  SKE+TK+EDAP  EWKNW+WRSEGDL LNGA+FT                  ARP
Sbjct: 333  PNDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAYFT-ASGAGASSSYARASSLGARP 391

Query: 414  SSLVTPLTIAAGALNCRKGSRC 349
            SSLV  +T  AGALNCRKGSRC
Sbjct: 392  SSLVGTITTNAGALNCRKGSRC 413


>ref|XP_003608909.1| Pectate lyase [Medicago truncatula] gi|355509964|gb|AES91106.1|
            Pectate lyase [Medicago truncatula]
          Length = 407

 Score =  669 bits (1725), Expect = 0.0
 Identities = 315/382 (82%), Positives = 337/382 (88%), Gaps = 1/382 (0%)
 Frame = -1

Query: 1491 VQNPDLVAQEVVSKINNS-TRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFG 1315
            +Q+PDLV QEV  KIN S  RRNLGYLSCG+GNPIDDCWRCDPNWEKNRQRLADCAIGFG
Sbjct: 26   LQDPDLVTQEVNRKINGSLARRNLGYLSCGSGNPIDDCWRCDPNWEKNRQRLADCAIGFG 85

Query: 1314 KQAIGGRDGRIYVVTDSANDDPVTPKPGTLRHAVIQDEPLWIIFERDMVIKLKEELIMNS 1135
            K AIGG++G+IYVVTDS +DDPVTPKPGTLR AVIQDEPLWIIF RDMVI+LKEELIMNS
Sbjct: 86   KNAIGGKNGKIYVVTDSGDDDPVTPKPGTLRFAVIQDEPLWIIFARDMVIQLKEELIMNS 145

Query: 1134 FKTIDGRGASVHIAGGPCITIQFVTNIIIHGLHIHDCTQGGNTNVRDSPRHFGFRTLSDG 955
            FKTIDGRGASVHIAGGPCITIQ+VTN+IIHG+HIHDC QGGN  VRDSP H+G+RT+SDG
Sbjct: 146  FKTIDGRGASVHIAGGPCITIQYVTNVIIHGIHIHDCKQGGNAMVRDSPGHYGWRTVSDG 205

Query: 954  DGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYLTHHNKVMLLGHSDTYTQD 775
            DGVSIFGGSHVWVDHCSLSNC DGLIDAIHGSTAITISNNY+THH+KVMLLGHSDTYTQD
Sbjct: 206  DGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDTYTQD 265

Query: 774  KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLA 595
            KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRF+A
Sbjct: 266  KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFVA 325

Query: 594  PNDMNSKEITKHEDAPVYEWKNWNWRSEGDLYLNGAFFTPXXXXXXXXXXXXXXXXXARP 415
            P+D  SKE+TKHEDAP  EWK WNWRSEGDL +NGAFFTP                 ARP
Sbjct: 326  PDDRFSKEVTKHEDAPEGEWKGWNWRSEGDLLINGAFFTPSGAGGASSSYARASSLSARP 385

Query: 414  SSLVTPLTIAAGALNCRKGSRC 349
            SSLV  +T  AG L C+KGSRC
Sbjct: 386  SSLVGTITTGAGVLGCKKGSRC 407


>gb|AFK44189.1| unknown [Medicago truncatula]
          Length = 407

 Score =  665 bits (1717), Expect = 0.0
 Identities = 314/382 (82%), Positives = 336/382 (87%), Gaps = 1/382 (0%)
 Frame = -1

Query: 1491 VQNPDLVAQEVVSKINNS-TRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFG 1315
            +Q+PDLV QEV  KIN S  RRNLGYLSCG+GNPIDDCWRCDPNWEKNRQRLADCAIGFG
Sbjct: 26   LQDPDLVTQEVNRKINGSLARRNLGYLSCGSGNPIDDCWRCDPNWEKNRQRLADCAIGFG 85

Query: 1314 KQAIGGRDGRIYVVTDSANDDPVTPKPGTLRHAVIQDEPLWIIFERDMVIKLKEELIMNS 1135
            K AIGG++G+IYVVTDS +DDPVTPKPGTLR AVIQDEPLWIIF RDMVI+LKEELIMNS
Sbjct: 86   KNAIGGKNGKIYVVTDSGDDDPVTPKPGTLRFAVIQDEPLWIIFARDMVIQLKEELIMNS 145

Query: 1134 FKTIDGRGASVHIAGGPCITIQFVTNIIIHGLHIHDCTQGGNTNVRDSPRHFGFRTLSDG 955
            FKTIDGRGASVHIAGGPCITIQ+VTN+IIHG+HIHDC QGGN  VRDSP H+G+RT+SDG
Sbjct: 146  FKTIDGRGASVHIAGGPCITIQYVTNVIIHGIHIHDCKQGGNAMVRDSPGHYGWRTVSDG 205

Query: 954  DGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYLTHHNKVMLLGHSDTYTQD 775
            DGVSIFGGSHVWVDHCSLSNC DGLIDAIHGSTAITISNNY+THH+KVMLLGHSDTYTQD
Sbjct: 206  DGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDTYTQD 265

Query: 774  KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLA 595
            KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRF+A
Sbjct: 266  KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFVA 325

Query: 594  PNDMNSKEITKHEDAPVYEWKNWNWRSEGDLYLNGAFFTPXXXXXXXXXXXXXXXXXARP 415
            P+D  SKE+TK EDAP  EWK WNWRSEGDL +NGAFFTP                 ARP
Sbjct: 326  PDDRFSKEVTKQEDAPEGEWKGWNWRSEGDLLINGAFFTPSGAGGASSSYARASSLSARP 385

Query: 414  SSLVTPLTIAAGALNCRKGSRC 349
            SSLV  +T  AG L C+KGSRC
Sbjct: 386  SSLVGTITTGAGVLGCKKGSRC 407


>ref|XP_002275781.1| PREDICTED: probable pectate lyase 5-like [Vitis vinifera]
          Length = 458

 Score =  664 bits (1712), Expect = 0.0
 Identities = 316/381 (82%), Positives = 340/381 (89%)
 Frame = -1

Query: 1491 VQNPDLVAQEVVSKINNSTRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGK 1312
            VQ+P+LV QEV   IN S RRNLGYLSCG+GNPIDDCWRC+ NWEKNRQ LADCAIGFGK
Sbjct: 80   VQDPELVIQEVHRSINES-RRNLGYLSCGSGNPIDDCWRCNANWEKNRQSLADCAIGFGK 138

Query: 1311 QAIGGRDGRIYVVTDSANDDPVTPKPGTLRHAVIQDEPLWIIFERDMVIKLKEELIMNSF 1132
             AIGG++G+IYVVTDS++DD V PKPGTLR+AVIQDEPLWIIF RDMVIKLKEELIMNSF
Sbjct: 139  NAIGGKNGKIYVVTDSSDDDVVNPKPGTLRYAVIQDEPLWIIFARDMVIKLKEELIMNSF 198

Query: 1131 KTIDGRGASVHIAGGPCITIQFVTNIIIHGLHIHDCTQGGNTNVRDSPRHFGFRTLSDGD 952
            KTIDGRGASVHIAGGPCITIQFVTNIIIHGL+IHDC QGGNTNVRDSP H+GFRT+SDGD
Sbjct: 199  KTIDGRGASVHIAGGPCITIQFVTNIIIHGLNIHDCKQGGNTNVRDSPSHYGFRTISDGD 258

Query: 951  GVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYLTHHNKVMLLGHSDTYTQDK 772
            GVSIFGGSH+WVDHCSLSNC DGLIDAIHGSTAITISNNY+THH+KVMLLGHSD+YTQDK
Sbjct: 259  GVSIFGGSHIWVDHCSLSNCHDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQDK 318

Query: 771  NMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLAP 592
            NMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRFLAP
Sbjct: 319  NMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQGNRFLAP 378

Query: 591  NDMNSKEITKHEDAPVYEWKNWNWRSEGDLYLNGAFFTPXXXXXXXXXXXXXXXXXARPS 412
            ND  SKE+TKHEDAP  +WKNWNWRSEGDL LNGA+FTP                 ARPS
Sbjct: 379  NDRFSKEVTKHEDAPESQWKNWNWRSEGDLMLNGAYFTP-SGAGASSSYARASSLGARPS 437

Query: 411  SLVTPLTIAAGALNCRKGSRC 349
            SLV  +T +AGAL+C+KGSRC
Sbjct: 438  SLVASITGSAGALSCKKGSRC 458


Top