BLASTX nr result

ID: Coptis21_contig00007791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007791
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632233.1| PREDICTED: uncharacterized protein LOC100258...   233   4e-59
ref|XP_002529501.1| Heterogeneous nuclear ribonucleoprotein A1, ...   231   1e-58
ref|XP_004148449.1| PREDICTED: uncharacterized protein LOC101211...   229   5e-58
ref|XP_002270568.1| PREDICTED: uncharacterized protein LOC100243...   226   5e-57
emb|CAN72884.1| hypothetical protein VITISV_028589 [Vitis vinifera]   226   5e-57

>ref|XP_003632233.1| PREDICTED: uncharacterized protein LOC100258161 isoform 1 [Vitis
           vinifera] gi|359479207|ref|XP_003632234.1| PREDICTED:
           uncharacterized protein LOC100258161 isoform 2 [Vitis
           vinifera] gi|147853236|emb|CAN80681.1| hypothetical
           protein VITISV_037734 [Vitis vinifera]
          Length = 478

 Score =  233 bits (593), Expect = 4e-59
 Identities = 136/241 (56%), Positives = 153/241 (63%), Gaps = 5/241 (2%)
 Frame = -3

Query: 711 KIYVSNVSADIDPQKLLGFFAKFGEVEEGPLGMDKQTGKPKGFALFVYKSVESAKKALEE 532
           KI+VSNVS++IDPQKLL FFAKFGE+EEGPLG+DK TGKPKGFALFVYKS+ES+++ALEE
Sbjct: 254 KIFVSNVSSEIDPQKLLEFFAKFGEIEEGPLGLDKSTGKPKGFALFVYKSIESSRRALEE 313

Query: 531 PHKSFEGHILHCQKAIDGPKPMKP-HFQQHSHGGGRPSKFPQNDKFNYXXXXXXXXXXXX 355
           PHK FEGH LHCQKAIDGPKP KP H   H H    PS+    DK  Y            
Sbjct: 314 PHKIFEGHTLHCQKAIDGPKPNKPFHHHHHQHQPHYPSR---KDKSKY-----SANAAGP 365

Query: 354 XHLMAQSAGPGMGYNQGASPALNPVLGQALTAFIASQ--XXXXXXXXXXXXXXXXXXAVN 181
            HLMA S GP M  N G +PALNP LGQALTA +ASQ                    A+ 
Sbjct: 366 GHLMAPS-GPSMTLNPGVAPALNPALGQALTALLASQGAGLGLTNLLGGLGGAPVNQAMP 424

Query: 180 PVAQPM--MQGGYSNQYVGTGYASQPGMHGGYSHTQAGQGSSGRSQKGAGHMGGMNPFMG 7
           P A  M  MQGGY NQ  G+ Y SQPGM GGY + Q GQ S GR Q+G        P+MG
Sbjct: 425 PAAHGMQGMQGGYGNQGAGS-YGSQPGMQGGYQNPQMGQASGGRPQQGGA------PYMG 477

Query: 6   H 4
           H
Sbjct: 478 H 478



 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 31/84 (36%), Positives = 45/84 (53%)
 Frame = -3

Query: 711 KIYVSNVSADIDPQKLLGFFAKFGEVEEGPLGMDKQTGKPKGFALFVYKSVESAKKALEE 532
           KI+V  +  D   + L   F K+GE+E+     DK +GK KG+A  ++K    A+KAL++
Sbjct: 158 KIFVHGLGWDTTAETLTSVFGKYGEIEDCKAVSDKISGKSKGYAFILFKHRSGARKALKQ 217

Query: 531 PHKSFEGHILHCQKAIDGPKPMKP 460
           P K     +  CQ A  GP P  P
Sbjct: 218 PQKKIGNRMTSCQLASAGPVPAPP 241


>ref|XP_002529501.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
           communis] gi|223531017|gb|EEF32870.1| Heterogeneous
           nuclear ribonucleoprotein A1, putative [Ricinus
           communis]
          Length = 462

 Score =  231 bits (589), Expect = 1e-58
 Identities = 131/239 (54%), Positives = 151/239 (63%), Gaps = 3/239 (1%)
 Frame = -3

Query: 711 KIYVSNVSADIDPQKLLGFFAKFGEVEEGPLGMDKQTGKPKGFALFVYKSVESAKKALEE 532
           KIYVSNV+AD+DP++L  FF+KFGE+EEGPLG+DK TGKPKGF LFVYKS ESAK+ALEE
Sbjct: 237 KIYVSNVAADLDPKELTNFFSKFGEIEEGPLGLDKLTGKPKGFCLFVYKSAESAKRALEE 296

Query: 531 PHKSFEGHILHCQKAIDGPKPMKPHFQQHSHGGGRPSKFPQNDKFNYXXXXXXXXXXXXX 352
           PHKSFEGH+LHCQKAIDGPK  KP  QQ  H   + S F +N    Y             
Sbjct: 297 PHKSFEGHMLHCQKAIDGPKHGKPQQQQQQHYNAQKSHFQRNGNPGY----SGGTASGPS 352

Query: 351 HLMAQSA-GPGMGYNQGA--SPALNPVLGQALTAFIASQXXXXXXXXXXXXXXXXXXAVN 181
           HLMA +A GPG+G+N+GA  +PALNP LGQALTA +A+Q                     
Sbjct: 353 HLMAPAAGGPGIGFNEGAAGAPALNPALGQALTALLATQGAGLGLNLLGTLGSAAGL--- 409

Query: 180 PVAQPMMQGGYSNQYVGTGYASQPGMHGGYSHTQAGQGSSGRSQKGAGHMGGMNPFMGH 4
           P A P MQ  Y NQ     Y  Q  MHG Y      QGSSGR Q GAG  GG+ P+MGH
Sbjct: 410 PAAAPGMQNPYGNQ--AGSYGHQGVMHGTY----PSQGSSGRGQHGAGQYGGVGPYMGH 462



 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 29/82 (35%), Positives = 44/82 (53%)
 Frame = -3

Query: 711 KIYVSNVSADIDPQKLLGFFAKFGEVEEGPLGMDKQTGKPKGFALFVYKSVESAKKALEE 532
           KI+V  +  D   + L   F ++GE+E+     DK +GK KG+   ++K    A+KAL+E
Sbjct: 130 KIFVHGLGWDTSAETLTNAFKQYGEIEDCKAVCDKVSGKSKGYGFILFKKRSGARKALQE 189

Query: 531 PHKSFEGHILHCQKAIDGPKPM 466
           P K     +  CQ A  GP P+
Sbjct: 190 PQKKIGNRMTACQLASIGPVPV 211


>ref|XP_004148449.1| PREDICTED: uncharacterized protein LOC101211535 [Cucumis sativus]
           gi|449503048|ref|XP_004161816.1| PREDICTED:
           uncharacterized protein LOC101228786 [Cucumis sativus]
          Length = 500

 Score =  229 bits (583), Expect = 5e-58
 Identities = 130/244 (53%), Positives = 152/244 (62%), Gaps = 8/244 (3%)
 Frame = -3

Query: 711 KIYVSNVSADIDPQKLLGFFAKFGEVEEGPLGMDKQTGKPKGFALFVYKSVESAKKALEE 532
           KIYVSNV AD+DPQKLL FF++FGEV+EGPLG+DK TGKPKGF LFVYKS+ESAKKALEE
Sbjct: 268 KIYVSNVGADVDPQKLLAFFSQFGEVDEGPLGLDKMTGKPKGFCLFVYKSIESAKKALEE 327

Query: 531 PHKSFEGHILHCQKAIDGPKPMKPHFQQHSHGGGRPSKFPQNDKFNYXXXXXXXXXXXXX 352
           PHK+FEGH+LHCQKAIDGPKP K   Q H+      + F +N   NY             
Sbjct: 328 PHKNFEGHVLHCQKAIDGPKPGKAQHQHHTPN----APFQRNKNPNY----TGGAASGSG 379

Query: 351 HLMAQSAGPGMGYNQGASPALNPVLGQALTAFIASQXXXXXXXXXXXXXXXXXXAVNPVA 172
           HLMA  AGPG+GYNQG    LNP +GQALTA +A Q                   +NP  
Sbjct: 380 HLMA-PAGPGVGYNQGPPQGLNPAIGQALTALLAGQ--GAGLGLTNLLGTLGTAGLNPAV 436

Query: 171 Q---PMMQGGYSNQYVGT----GYASQPGMHGGYSHTQAGQGSSGR-SQKGAGHMGGMNP 16
           Q   P +Q GY +Q   +    GY SQ G+ GGY + Q GQG +GR  Q G G  GG   
Sbjct: 437 QGAGPGVQSGYGSQANISPGVIGYGSQSGVQGGYPNQQMGQGGAGRGGQHGVGQYGGPGG 496

Query: 15  FMGH 4
           +MGH
Sbjct: 497 YMGH 500



 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 30/81 (37%), Positives = 45/81 (55%)
 Frame = -3

Query: 711 KIYVSNVSADIDPQKLLGFFAKFGEVEEGPLGMDKQTGKPKGFALFVYKSVESAKKALEE 532
           KI+V  +  D + + L+  F +FGE+E+     DK +GK KG+   ++K    A+KAL+E
Sbjct: 168 KIFVHGLGWDTNAETLINVFKQFGEIEDCKAVCDKVSGKSKGYGFILFKKRSGARKALKE 227

Query: 531 PHKSFEGHILHCQKAIDGPKP 469
           P K     +  CQ A  GP P
Sbjct: 228 PQKKIGNRMTACQLASVGPVP 248


>ref|XP_002270568.1| PREDICTED: uncharacterized protein LOC100243393 [Vitis vinifera]
          Length = 463

 Score =  226 bits (575), Expect = 5e-57
 Identities = 134/248 (54%), Positives = 153/248 (61%), Gaps = 12/248 (4%)
 Frame = -3

Query: 711 KIYVSNVSADIDPQKLLGFFAKFGEVEEGPLGMDKQTGKPKGFALFVYKSVESAKKALEE 532
           KIYVSNV A++DPQKLL FF+K+GE+EEGPLG+DKQTGKPKGF LFVYK+ E AKKAL+E
Sbjct: 223 KIYVSNVGAELDPQKLLVFFSKYGEIEEGPLGLDKQTGKPKGFCLFVYKTAEGAKKALDE 282

Query: 531 PHKSFEGHILHCQKAIDGPKPMK-PHFQQHSHGGGRPSKFPQNDKFNYXXXXXXXXXXXX 355
           PHK+F+GHILHCQKAIDGPKP K    QQ  H    P+        +Y            
Sbjct: 283 PHKNFDGHILHCQKAIDGPKPGKQQQLQQQQHHHNLPNT-------HYTKSEITNFMGPQ 335

Query: 354 XHLMAQSAGPGMGYNQG-ASPALNPVLGQALTAFIASQ--XXXXXXXXXXXXXXXXXXAV 184
            HLMA S  P + YNQG A+ ALNP LGQALTA +A+Q                    AV
Sbjct: 336 GHLMAPSGPPAIPYNQGSAAQALNPALGQALTALLATQGAGLGLTNLLGTLGSASVGAAV 395

Query: 183 NPV---AQPMMQGGYSNQYV----GTGYASQPGMHGGYSHTQAGQG-SSGRSQKGAGHMG 28
           NP    A   MQGGY NQ V     +G     G  G Y + Q GQG SSGRSQ G GHMG
Sbjct: 396 NPSVAGAGHGMQGGYPNQAVAGNISSGMVGGYGSQGAYGNQQMGQGSSSGRSQHGVGHMG 455

Query: 27  GMNPFMGH 4
           GM P+MGH
Sbjct: 456 GMAPYMGH 463



 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 28/81 (34%), Positives = 45/81 (55%)
 Frame = -3

Query: 711 KIYVSNVSADIDPQKLLGFFAKFGEVEEGPLGMDKQTGKPKGFALFVYKSVESAKKALEE 532
           KI+V  +  D + + L+  F  +GE+E+     DK +GK KG+   ++K+   A+KAL++
Sbjct: 119 KIFVHGLGWDTNAETLISVFKDYGEIEDCRAVCDKLSGKSKGYGFILFKTRSGARKALKQ 178

Query: 531 PHKSFEGHILHCQKAIDGPKP 469
           P K     +  CQ A  GP P
Sbjct: 179 PQKKIGNRMTACQLASIGPVP 199


>emb|CAN72884.1| hypothetical protein VITISV_028589 [Vitis vinifera]
          Length = 463

 Score =  226 bits (575), Expect = 5e-57
 Identities = 134/248 (54%), Positives = 153/248 (61%), Gaps = 12/248 (4%)
 Frame = -3

Query: 711 KIYVSNVSADIDPQKLLGFFAKFGEVEEGPLGMDKQTGKPKGFALFVYKSVESAKKALEE 532
           KIYVSNV A++DPQKLL FF+K+GE+EEGPLG+DKQTGKPKGF LFVYK+ E AKKAL+E
Sbjct: 223 KIYVSNVGAELDPQKLLVFFSKYGEIEEGPLGLDKQTGKPKGFCLFVYKTAEGAKKALDE 282

Query: 531 PHKSFEGHILHCQKAIDGPKPMK-PHFQQHSHGGGRPSKFPQNDKFNYXXXXXXXXXXXX 355
           PHK+F+GHILHCQKAIDGPKP K    QQ  H    P+        +Y            
Sbjct: 283 PHKNFDGHILHCQKAIDGPKPGKQQQLQQQQHHHNLPNT-------HYTKSEITNFMGPQ 335

Query: 354 XHLMAQSAGPGMGYNQG-ASPALNPVLGQALTAFIASQ--XXXXXXXXXXXXXXXXXXAV 184
            HLMA S  P + YNQG A+ ALNP LGQALTA +A+Q                    AV
Sbjct: 336 GHLMAPSGPPAIPYNQGSAAQALNPALGQALTALLATQGAGLGLTNLLGTLGSASVGAAV 395

Query: 183 NPV---AQPMMQGGYSNQYV----GTGYASQPGMHGGYSHTQAGQG-SSGRSQKGAGHMG 28
           NP    A   MQGGY NQ V     +G     G  G Y + Q GQG SSGRSQ G GHMG
Sbjct: 396 NPSVAGAGHGMQGGYPNQAVAGNISSGMVGGYGSQGAYGNQQMGQGSSSGRSQHGVGHMG 455

Query: 27  GMNPFMGH 4
           GM P+MGH
Sbjct: 456 GMAPYMGH 463



 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 28/81 (34%), Positives = 45/81 (55%)
 Frame = -3

Query: 711 KIYVSNVSADIDPQKLLGFFAKFGEVEEGPLGMDKQTGKPKGFALFVYKSVESAKKALEE 532
           KI+V  +  D + + L+  F  +GE+E+     DK +GK KG+   ++K+   A+KAL++
Sbjct: 119 KIFVHGLGWDTNAETLISVFKDYGEIEDCRAVCDKLSGKSKGYGFILFKTRSGARKALKQ 178

Query: 531 PHKSFEGHILHCQKAIDGPKP 469
           P K     +  CQ A  GP P
Sbjct: 179 PQKKIGNRMTACQLASIGPVP 199


Top