BLASTX nr result

ID: Coptis21_contig00007775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007775
         (777 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37536.3| unnamed protein product [Vitis vinifera]              286   3e-75
ref|XP_002522842.1| GDP-mannose transporter, putative [Ricinus c...   281   1e-73
ref|XP_002274276.2| PREDICTED: GDP-mannose transporter GONST1-li...   280   2e-73
ref|XP_002306245.1| predicted protein [Populus trichocarpa] gi|2...   245   7e-63
ref|XP_004164296.1| PREDICTED: GDP-mannose transporter GONST1-li...   240   2e-61

>emb|CBI37536.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  286 bits (733), Expect = 3e-75
 Identities = 149/227 (65%), Positives = 175/227 (77%), Gaps = 12/227 (5%)
 Frame = +1

Query: 133 GALVDTPDPVL---------IVERGGFTSR---EQNGVIDQVSSPARRDIVNRSLSAMKP 276
           G  +D+PDPVL          V R G  S    E NGV+DQVSSP RR+++NRS+ +MKP
Sbjct: 254 GPSLDSPDPVLERNLMEDTRTVIRSGERSHNLHETNGVLDQVSSPLRREVLNRSVFSMKP 313

Query: 277 FGNDDVDLEGGKEEKDIDKAVRGTRVVKVRNQAVLSGLAYCISSCSMILINKLVLSSYNF 456
            G+++ DLE GK EKD +K+VR  RVV++ NQA+LSG AYCISSCSMIL+NK VLSSY+F
Sbjct: 314 LGSEETDLEDGKLEKDREKSVRSNRVVRIHNQALLSGFAYCISSCSMILVNKFVLSSYDF 373

Query: 457 NAGISLMLYQNXXXXXXXXXXXXXXXXXTEPLTWRLIRVWLPVNFIFVGMLITSMFSLKY 636
           NAGISLM+YQN                 TEPLTW+LI+VWLPVN IFVGML+TSMFSLKY
Sbjct: 374 NAGISLMIYQNLVSVIVVTVLSFFGLITTEPLTWKLIKVWLPVNVIFVGMLVTSMFSLKY 433

Query: 637 INVAMVTVLKNVTNVITALGEMYLFSKHHESRVWAALFLMIISAIFG 777
           INVAMVTVLKNVTNVITA+GEMYLF+KHH++RVWAALFLMIISAI G
Sbjct: 434 INVAMVTVLKNVTNVITAVGEMYLFNKHHDNRVWAALFLMIISAISG 480


>ref|XP_002522842.1| GDP-mannose transporter, putative [Ricinus communis]
           gi|223537926|gb|EEF39540.1| GDP-mannose transporter,
           putative [Ricinus communis]
          Length = 485

 Score =  281 bits (718), Expect = 1e-73
 Identities = 140/194 (72%), Positives = 157/194 (80%)
 Frame = +1

Query: 196 EQNGVIDQVSSPARRDIVNRSLSAMKPFGNDDVDLEGGKEEKDIDKAVRGTRVVKVRNQA 375
           E NGV+DQ+SSP R ++VNRS   M+   ND++DLEGGK EKD DK  R  R +K++NQA
Sbjct: 19  ESNGVVDQISSPLRNEVVNRSSFTMRSHENDEIDLEGGKLEKDRDKTTRSNRALKIQNQA 78

Query: 376 VLSGLAYCISSCSMILINKLVLSSYNFNAGISLMLYQNXXXXXXXXXXXXXXXXXTEPLT 555
           +LSGLAYCISSCSMIL+NK VLSSY+FNAGISLM+YQN                 TEPLT
Sbjct: 79  LLSGLAYCISSCSMILVNKFVLSSYDFNAGISLMVYQNFISVIIVSVLSFLGIISTEPLT 138

Query: 556 WRLIRVWLPVNFIFVGMLITSMFSLKYINVAMVTVLKNVTNVITALGEMYLFSKHHESRV 735
           WRLI+VWLPVN IFVGML+TSMFSLKYINVAMVTVLKNVTNVITALGEMYLFSKHH+SRV
Sbjct: 139 WRLIKVWLPVNVIFVGMLVTSMFSLKYINVAMVTVLKNVTNVITALGEMYLFSKHHDSRV 198

Query: 736 WAALFLMIISAIFG 777
           W ALFLMIISAI G
Sbjct: 199 WTALFLMIISAISG 212


>ref|XP_002274276.2| PREDICTED: GDP-mannose transporter GONST1-like [Vitis vinifera]
          Length = 501

 Score =  280 bits (717), Expect = 2e-73
 Identities = 138/194 (71%), Positives = 162/194 (83%)
 Frame = +1

Query: 196 EQNGVIDQVSSPARRDIVNRSLSAMKPFGNDDVDLEGGKEEKDIDKAVRGTRVVKVRNQA 375
           E NGV+DQVSSP RR+++NRS+ +MKP G+++ DLE GK EKD +K+VR  RVV++ NQA
Sbjct: 19  ETNGVLDQVSSPLRREVLNRSVFSMKPLGSEETDLEDGKLEKDREKSVRSNRVVRIHNQA 78

Query: 376 VLSGLAYCISSCSMILINKLVLSSYNFNAGISLMLYQNXXXXXXXXXXXXXXXXXTEPLT 555
           +LSG AYCISSCSMIL+NK VLSSY+FNAGISLM+YQN                 TEPLT
Sbjct: 79  LLSGFAYCISSCSMILVNKFVLSSYDFNAGISLMIYQNLVSVIVVTVLSFFGLITTEPLT 138

Query: 556 WRLIRVWLPVNFIFVGMLITSMFSLKYINVAMVTVLKNVTNVITALGEMYLFSKHHESRV 735
           W+LI+VWLPVN IFVGML+TSMFSLKYINVAMVTVLKNVTNVITA+GEMYLF+KHH++RV
Sbjct: 139 WKLIKVWLPVNVIFVGMLVTSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKHHDNRV 198

Query: 736 WAALFLMIISAIFG 777
           WAALFLMIISAI G
Sbjct: 199 WAALFLMIISAISG 212


>ref|XP_002306245.1| predicted protein [Populus trichocarpa] gi|222855694|gb|EEE93241.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  245 bits (626), Expect = 7e-63
 Identities = 125/170 (73%), Positives = 137/170 (80%)
 Frame = +1

Query: 268 MKPFGNDDVDLEGGKEEKDIDKAVRGTRVVKVRNQAVLSGLAYCISSCSMILINKLVLSS 447
           MK   ND++DLEGGK  KD DK  R   V++++NQA+ SG+AYCISSCSMIL+NK VLSS
Sbjct: 1   MKSHENDEIDLEGGKLVKDKDKPTRSKGVIRIQNQALFSGIAYCISSCSMILVNKYVLSS 60

Query: 448 YNFNAGISLMLYQNXXXXXXXXXXXXXXXXXTEPLTWRLIRVWLPVNFIFVGMLITSMFS 627
           Y+FNAGISLMLYQN                 TEPLTWRLI+VWLPVNFIFVGMLITSMFS
Sbjct: 61  YDFNAGISLMLYQNFISVIIVSTLRFLGVISTEPLTWRLIKVWLPVNFIFVGMLITSMFS 120

Query: 628 LKYINVAMVTVLKNVTNVITALGEMYLFSKHHESRVWAALFLMIISAIFG 777
           LKYINVAMVTVLKNVTNVITALGEMYLF K H+SRVWAALFLMIISAI G
Sbjct: 121 LKYINVAMVTVLKNVTNVITALGEMYLFQKDHDSRVWAALFLMIISAISG 170


>ref|XP_004164296.1| PREDICTED: GDP-mannose transporter GONST1-like [Cucumis sativus]
          Length = 336

 Score =  240 bits (613), Expect = 2e-61
 Identities = 122/170 (71%), Positives = 137/170 (80%)
 Frame = +1

Query: 268 MKPFGNDDVDLEGGKEEKDIDKAVRGTRVVKVRNQAVLSGLAYCISSCSMILINKLVLSS 447
           MK F N + DLE GK  KD DKA+R  R  ++ NQA+LSGLAYCISSCSMIL+NKLVLSS
Sbjct: 1   MKHFENGESDLEEGKMGKDRDKALRNNRAFRLHNQALLSGLAYCISSCSMILVNKLVLSS 60

Query: 448 YNFNAGISLMLYQNXXXXXXXXXXXXXXXXXTEPLTWRLIRVWLPVNFIFVGMLITSMFS 627
           Y+FNAGISLM+YQN                 TEPLTWRL++VW+PVN IFVGMLITS+FS
Sbjct: 61  YDFNAGISLMVYQNFISVSIVTILSVMGIISTEPLTWRLVKVWMPVNVIFVGMLITSIFS 120

Query: 628 LKYINVAMVTVLKNVTNVITALGEMYLFSKHHESRVWAALFLMIISAIFG 777
           LKYINVAMVTVLKNVTNVITA+GEMYLF KHH++RVWAALFLMIISAI G
Sbjct: 121 LKYINVAMVTVLKNVTNVITAVGEMYLFGKHHDNRVWAALFLMIISAITG 170


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