BLASTX nr result

ID: Coptis21_contig00007766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007766
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527984.1| Ubiquinone biosynthesis protein coq-8, putat...   175   6e-42
ref|XP_002332099.1| predicted protein [Populus trichocarpa] gi|2...   174   1e-41
ref|XP_002283043.1| PREDICTED: uncharacterized protein LOC100242...   171   8e-41
ref|XP_002330816.1| predicted protein [Populus trichocarpa] gi|2...   165   6e-39
ref|XP_003550104.1| PREDICTED: uncharacterized protein LOC100775...   164   2e-38

>ref|XP_002527984.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis]
            gi|223532610|gb|EEF34396.1| Ubiquinone biosynthesis
            protein coq-8, putative [Ricinus communis]
          Length = 965

 Score =  175 bits (444), Expect = 6e-42
 Identities = 86/152 (56%), Positives = 112/152 (73%), Gaps = 2/152 (1%)
 Frame = -1

Query: 622  DGNRNYMQLPADVTSSTNGEINGIDDRKNEKDD--KIFQNPRIHDAFMGVGDYESIVLPN 449
            +GN  Y +L  D +SS +   +      N++D+  +IF +PRIHDAF+GVG+YE++ +PN
Sbjct: 814  NGNDGYTRLATDGSSSASAADSFASGDGNKRDNVTRIFIDPRIHDAFLGVGEYENLAVPN 873

Query: 448  GMFGLGFKRFKSKDGCLTSFGHSGLGGSTGFCDVKHNFAIAVTLNKMSLGGVTGKIMQLV 269
            G FGLGF+R  S DG L  FGHSG+GGSTGFCD+K+ FAIAVT+NK+S+G VT KI +LV
Sbjct: 874  GKFGLGFRRNSSNDGSLIGFGHSGMGGSTGFCDIKNRFAIAVTVNKLSVGFVTRKIAELV 933

Query: 268  CSELNVPLPEEFARLSGLGSDMELNFDKPLIN 173
            CSE+NVPLPEE +     G D+ELN  KPLIN
Sbjct: 934  CSEVNVPLPEELSISGERGPDLELNIGKPLIN 965


>ref|XP_002332099.1| predicted protein [Populus trichocarpa] gi|222874919|gb|EEF12050.1|
            predicted protein [Populus trichocarpa]
          Length = 987

 Score =  174 bits (442), Expect = 1e-41
 Identities = 82/126 (65%), Positives = 98/126 (77%)
 Frame = -1

Query: 550  DDRKNEKDDKIFQNPRIHDAFMGVGDYESIVLPNGMFGLGFKRFKSKDGCLTSFGHSGLG 371
            ++ +    +KIF NPRIHD FMGVG+Y ++VLPNG FGLGF+RF S DG    FGHSG+G
Sbjct: 862  ENSRQNNANKIFNNPRIHDEFMGVGEYRNLVLPNGKFGLGFRRFSSSDGSFYGFGHSGMG 921

Query: 370  GSTGFCDVKHNFAIAVTLNKMSLGGVTGKIMQLVCSELNVPLPEEFARLSGLGSDMELNF 191
            GSTGFCD+K+ FAIAVTLNKMSLG  T +I+Q VCSELNVPLP+EFA LS    D EL+ 
Sbjct: 922  GSTGFCDIKNRFAIAVTLNKMSLGTATRRIVQFVCSELNVPLPDEFAVLSETAPDEELSI 981

Query: 190  DKPLIN 173
             +PLIN
Sbjct: 982  ARPLIN 987


>ref|XP_002283043.1| PREDICTED: uncharacterized protein LOC100242392 [Vitis vinifera]
          Length = 978

 Score =  171 bits (434), Expect = 8e-41
 Identities = 89/166 (53%), Positives = 114/166 (68%), Gaps = 12/166 (7%)
 Frame = -1

Query: 634  YSKKDGNRNYMQLPADVTSSTNGEI-----------NGIDDRKNEKDDKIFQNPRIHDAF 488
            Y++K    N+ + P D  SS+   +           NG D  K+  D KIF NPRIHDAF
Sbjct: 815  YNRKARCDNHGRFPHDSGSSSESTVSNNGHRIGSTENGDDSPKS--DTKIFSNPRIHDAF 872

Query: 487  MGVGDYESIVLPNGMFGLGFKRFKSKDGCLTSFGHSGLGGSTGFCDVKHNFAIAVTLNKM 308
            +GVG+YE+   P+G FGLGFK   SKDG L  FGHSG+GGSTG+CD+ + FAIAVTLNKM
Sbjct: 873  LGVGEYENYGFPSGKFGLGFKSCSSKDGTLLGFGHSGMGGSTGYCDINNKFAIAVTLNKM 932

Query: 307  SLGGVTGKIMQLVCSELNVPLPEEFARLSGLGS-DMELNFDKPLIN 173
            SLGGVTGKI+Q +CSELN+P+PE+++R SG    + + N  +PLIN
Sbjct: 933  SLGGVTGKIIQFICSELNLPVPEDYSRFSGSEKPEEQSNVWRPLIN 978


>ref|XP_002330816.1| predicted protein [Populus trichocarpa] gi|222872618|gb|EEF09749.1|
            predicted protein [Populus trichocarpa]
          Length = 972

 Score =  165 bits (418), Expect = 6e-39
 Identities = 82/139 (58%), Positives = 99/139 (71%)
 Frame = -1

Query: 589  DVTSSTNGEINGIDDRKNEKDDKIFQNPRIHDAFMGVGDYESIVLPNGMFGLGFKRFKSK 410
            + +S  N   +  D RKN     IF +PRIHD FMG G+Y  +VLPNG FGLGFKRF S 
Sbjct: 835  NTSSPDNSSASSNDSRKNNVI-WIFNDPRIHDQFMGTGEYSDLVLPNGKFGLGFKRFSSS 893

Query: 409  DGCLTSFGHSGLGGSTGFCDVKHNFAIAVTLNKMSLGGVTGKIMQLVCSELNVPLPEEFA 230
            DG  + FGHSGLGGSTGFCD+++ FAIAVTLNK+S G  T KI+Q VCSELNVPLP+EF+
Sbjct: 894  DGSFSGFGHSGLGGSTGFCDIENRFAIAVTLNKISFGTATRKIIQFVCSELNVPLPDEFS 953

Query: 229  RLSGLGSDMELNFDKPLIN 173
             LSG  +  EL+  + L N
Sbjct: 954  ILSGTEAGEELSTSRALFN 972


>ref|XP_003550104.1| PREDICTED: uncharacterized protein LOC100775929 isoform 2 [Glycine
            max]
          Length = 994

 Score =  164 bits (414), Expect = 2e-38
 Identities = 84/168 (50%), Positives = 116/168 (69%), Gaps = 11/168 (6%)
 Frame = -1

Query: 643  SNTYSKKDGNRNYMQLPADVTSSTNGEIN-GIDDRKNEKDD--------KIFQNPRIHDA 491
            +N+Y K   + ++    A+   +TN E + G DD  +   +        K+++NPRI D 
Sbjct: 830  TNSYEKVSSHEDF---DANEGRNTNSESSSGGDDSSSRIGNNLRTHVARKVYKNPRIIDE 886

Query: 490  FMGVGDYESIVLPNGMFGLGFKRFKSKDGCLTSFGHSGLGGSTGFCDVKHNFAIAVTLNK 311
            F+G G+YE++ LP   FGLGFKRF SKDG   +FGHSG+GGSTGFCDV +NF++AVTLNK
Sbjct: 887  FLGTGEYENLALPGESFGLGFKRFSSKDGSSIAFGHSGMGGSTGFCDVTNNFSVAVTLNK 946

Query: 310  MSLGGVTGKIMQLVCSELNVPLPEEFAR--LSGLGSDMELNFDKPLIN 173
            MS GGVTGKI+QLVCSELN+P+P++F R  +   G D +L+  +P+IN
Sbjct: 947  MSFGGVTGKIVQLVCSELNIPVPDDFLRFAVEQSGPDEQLSMGRPIIN 994


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