BLASTX nr result

ID: Coptis21_contig00007755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007755
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525120.1| PREDICTED: uncharacterized protein LOC100527...    85   5e-15
gb|AAK60319.1|AF385728_1 AT3g47831/T23J7 [Arabidopsis thaliana] ...    85   7e-15
ref|XP_002877576.1| predicted protein [Arabidopsis lyrata subsp....    83   2e-14
gb|ACU16813.1| unknown [Glycine max]                                   82   5e-14
ref|XP_002318011.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14

>ref|XP_003525120.1| PREDICTED: uncharacterized protein LOC100527671 [Glycine max]
          Length = 57

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/55 (72%), Positives = 46/55 (83%)
 Frame = +2

Query: 89  GAASKVGDWAFKAFTGGLGVVTIYLTATFSVNVYRGLSWHNAQQKLGEGESQDQS 253
           G A KVGD+AFKAFT  LGV TIYLTATFSVNVYRGLSWHNAQ KL + ++ +Q+
Sbjct: 2   GIAGKVGDYAFKAFTATLGVATIYLTATFSVNVYRGLSWHNAQTKLDKQDADEQA 56


>gb|AAK60319.1|AF385728_1 AT3g47831/T23J7 [Arabidopsis thaliana] gi|18700230|gb|AAL77725.1|
           AT3g47831/T23J7 [Arabidopsis thaliana]
           gi|26452241|dbj|BAC43208.1| unknown protein [Arabidopsis
           thaliana]
          Length = 57

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 38/54 (70%), Positives = 44/54 (81%)
 Frame = +2

Query: 89  GAASKVGDWAFKAFTGGLGVVTIYLTATFSVNVYRGLSWHNAQQKLGEGESQDQ 250
           G  ++ GDW+FKAFT GLG+ TIYLTATFS NVYRGLSWHNAQ KL   ES++Q
Sbjct: 2   GIVTRAGDWSFKAFTAGLGLATIYLTATFSFNVYRGLSWHNAQSKLEIEESEEQ 55


>ref|XP_002877576.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323414|gb|EFH53835.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 57

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 37/54 (68%), Positives = 43/54 (79%)
 Frame = +2

Query: 89  GAASKVGDWAFKAFTGGLGVVTIYLTATFSVNVYRGLSWHNAQQKLGEGESQDQ 250
           G  ++ GDW+FKAFT GLG+ TIYLT TFS NVYRGLSWHNAQ KL   ES++Q
Sbjct: 2   GIVTRAGDWSFKAFTAGLGLATIYLTGTFSFNVYRGLSWHNAQSKLEIEESEEQ 55


>gb|ACU16813.1| unknown [Glycine max]
          Length = 57

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/55 (70%), Positives = 45/55 (81%)
 Frame = +2

Query: 89  GAASKVGDWAFKAFTGGLGVVTIYLTATFSVNVYRGLSWHNAQQKLGEGESQDQS 253
           G A KV D+AFKAFT  LGV TIYLTATFSVNVYRGLSWHNAQ KL + ++ +Q+
Sbjct: 2   GIAGKVRDYAFKAFTATLGVATIYLTATFSVNVYRGLSWHNAQTKLDKQDADEQA 56


>ref|XP_002318011.1| predicted protein [Populus trichocarpa] gi|222858684|gb|EEE96231.1|
           predicted protein [Populus trichocarpa]
          Length = 80

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 37/43 (86%), Positives = 37/43 (86%)
 Frame = +2

Query: 89  GAASKVGDWAFKAFTGGLGVVTIYLTATFSVNVYRGLSWHNAQ 217
           G ASK GDW FKAFT GLGV TIYL ATFSVNVYRGLSWHNAQ
Sbjct: 2   GIASKAGDWTFKAFTAGLGVTTIYLAATFSVNVYRGLSWHNAQ 44


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