BLASTX nr result

ID: Coptis21_contig00007706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007706
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_194495.3| Eukaryotic release factor 1 (eRF1) family prote...    69   5e-10
ref|XP_002867488.1| hypothetical protein ARALYDRAFT_492022 [Arab...    69   5e-10
gb|AAG40400.1|AF325048_1 AT4g27650 [Arabidopsis thaliana]              69   5e-10
ref|XP_002279875.1| PREDICTED: protein pelota [Vitis vinifera] g...    65   6e-09
emb|CAN70195.1| hypothetical protein VITISV_001356 [Vitis vinifera]    65   6e-09

>ref|NP_194495.3| Eukaryotic release factor 1 (eRF1) family protein [Arabidopsis
           thaliana] gi|3941543|gb|AAC82379.1| pelota [Arabidopsis
           thaliana] gi|4469016|emb|CAB38277.1| pelota (PEL1)
           [Arabidopsis thaliana] gi|7269619|emb|CAB81415.1| pelota
           (PEL1) [Arabidopsis thaliana] gi|18377690|gb|AAL66995.1|
           putative pelota (PEL1) protein [Arabidopsis thaliana]
           gi|20465995|gb|AAM20219.1| putative pelota protein
           (PEL1) [Arabidopsis thaliana]
           gi|332659974|gb|AEE85374.1| Eukaryotic release factor 1
           (eRF1) family protein [Arabidopsis thaliana]
          Length = 378

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/45 (68%), Positives = 38/45 (84%)
 Frame = +3

Query: 183 MKIVRRDYIRNGAGYVRMIPEESDDLWVAYNLMAVGDFVLADTVR 317
           MKIVRRD++RNG G V+M+ E+SDDLW AYNL+AVGD V+A T R
Sbjct: 1   MKIVRRDFVRNGPGSVKMVAEDSDDLWYAYNLIAVGDSVMAVTFR 45


>ref|XP_002867488.1| hypothetical protein ARALYDRAFT_492022 [Arabidopsis lyrata subsp.
           lyrata] gi|297313324|gb|EFH43747.1| hypothetical protein
           ARALYDRAFT_492022 [Arabidopsis lyrata subsp. lyrata]
          Length = 378

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/45 (68%), Positives = 38/45 (84%)
 Frame = +3

Query: 183 MKIVRRDYIRNGAGYVRMIPEESDDLWVAYNLMAVGDFVLADTVR 317
           MKIVRRD++RNG G V+M+ E+SDDLW AYNL+AVGD V+A T R
Sbjct: 1   MKIVRRDFVRNGPGSVKMVAEDSDDLWYAYNLIAVGDSVMAVTFR 45


>gb|AAG40400.1|AF325048_1 AT4g27650 [Arabidopsis thaliana]
          Length = 251

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/45 (68%), Positives = 38/45 (84%)
 Frame = +3

Query: 183 MKIVRRDYIRNGAGYVRMIPEESDDLWVAYNLMAVGDFVLADTVR 317
           MKIVRRD++RNG G V+M+ E+SDDLW AYNL+AVGD V+A T R
Sbjct: 1   MKIVRRDFVRNGPGSVKMVAEDSDDLWYAYNLIAVGDSVMAVTFR 45


>ref|XP_002279875.1| PREDICTED: protein pelota [Vitis vinifera]
           gi|297735305|emb|CBI17667.3| unnamed protein product
           [Vitis vinifera]
          Length = 378

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/45 (66%), Positives = 36/45 (80%)
 Frame = +3

Query: 183 MKIVRRDYIRNGAGYVRMIPEESDDLWVAYNLMAVGDFVLADTVR 317
           MKI+RRD + NG G V+M+P +SDDLW AYNL+A GD VLA TVR
Sbjct: 1   MKIIRRDLVANGPGSVKMVPVDSDDLWYAYNLIAPGDTVLAVTVR 45


>emb|CAN70195.1| hypothetical protein VITISV_001356 [Vitis vinifera]
          Length = 782

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/45 (66%), Positives = 36/45 (80%)
 Frame = +3

Query: 183 MKIVRRDYIRNGAGYVRMIPEESDDLWVAYNLMAVGDFVLADTVR 317
           MKI+RRD + NG G V+M+P +SDDLW AYNL+A GD VLA TVR
Sbjct: 1   MKIIRRDLVANGPGSVKMVPVDSDDLWYAYNLIAPGDTVLAVTVR 45


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