BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007696
         (1855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279575.1| PREDICTED: ribosome biogenesis protein WDR12...   652   0.0  
ref|XP_002324109.1| predicted protein [Populus trichocarpa] gi|2...   630   e-178
emb|CAN70824.1| hypothetical protein VITISV_042345 [Vitis vinifera]   625   e-176
ref|XP_003543948.1| PREDICTED: ribosome biogenesis protein WDR12...   614   e-173
ref|XP_003516844.1| PREDICTED: ribosome biogenesis protein WDR12...   613   e-173

>ref|XP_002279575.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Vitis vinifera]
            gi|296082215|emb|CBI21220.3| unnamed protein product
            [Vitis vinifera]
          Length = 438

 Score =  652 bits (1681), Expect = 0.0
 Identities = 307/424 (72%), Positives = 354/424 (83%)
 Frame = +3

Query: 150  TKQVQVRFITKLKSPLKIPSTSIAIPSKSTRLDLSTIVNDFIKSGNNSHWERLPFDFLID 329
            +++VQVRF TKL+SP K P TSIAIPS  TR+ LS IVN+ +KSGN   W+  PFDFLID
Sbjct: 11   SRRVQVRFTTKLQSPFKTPPTSIAIPSNLTRMGLSAIVNNLLKSGNPD-WKPEPFDFLID 69

Query: 330  GELVRMELEHFLLAKGISAEKILEIEYIKAAVPRKQEDSCLHDDWVSAVNGSNPRFILTG 509
            GELVRM LE FL+AKGISAEKILEIEYIKA  PRKQE+  LHDDWVSAV+GSNP FILTG
Sbjct: 70   GELVRMSLEQFLIAKGISAEKILEIEYIKAVAPRKQEEPSLHDDWVSAVDGSNPGFILTG 129

Query: 510  SYDSFARVWKSDGLCTHVLEGHKDAITSVSLVNSKGVESDTSLHIATASKDRTVRLWKFD 689
             YD   R+WK+ G CTH+LEGH DAITSV  ++ KG+ES  +  +ATASKDRT+RLWKFD
Sbjct: 130  CYDGLGRLWKAAGSCTHILEGHNDAITSVKFIDPKGLESVNNSVVATASKDRTLRLWKFD 189

Query: 690  AEEHYNQPRKITAHKVLKGHTAAVQSVVSHPSGDMVCSGSWDSTINLWRTNDSEAEGNLA 869
            A E ++ P KI A K+L GH A+VQSV   P+G+MVCSGSWD TINLWRT++ + EG+L 
Sbjct: 190  AGERHDLPLKIRAFKILHGHNASVQSVAVQPTGNMVCSGSWDCTINLWRTDEFDVEGDLV 249

Query: 870  SIKKRKVGTDAKESQLEGEAVSTFVGHTQCVSSVVWPEREDIYSASWDHSIRRWDIETGK 1049
            S+KKRKV  +A+ESQ EGEAVST VGHTQCVSSV+WP+ E IYSASWDHS+RRWD+ETGK
Sbjct: 250  SVKKRKVNNEAEESQAEGEAVSTIVGHTQCVSSVIWPQHETIYSASWDHSVRRWDVETGK 309

Query: 1050 DTLNVFTGKVLNCVDVGGEGSSLIAAGGSDPVLRIWDPRRPGNVAPTFQFSSHSSWIMAC 1229
            D+ N+F GK LNC+DVGGE S+LIAAGGSD  LRIWDPR+PG + P FQFSSH+SWI AC
Sbjct: 310  DSWNLFCGKALNCLDVGGESSALIAAGGSDTTLRIWDPRKPGTLTPVFQFSSHTSWISAC 369

Query: 1230 KWHKKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSHKDKVLCADWWKDDCVISGGADSEL 1409
            KWH KSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH +KVLCADWWK D V+SGGADS+L
Sbjct: 370  KWHNKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSHNNKVLCADWWKGDSVVSGGADSKL 429

Query: 1410 CISS 1421
            CISS
Sbjct: 430  CISS 433


>ref|XP_002324109.1| predicted protein [Populus trichocarpa] gi|222867111|gb|EEF04242.1|
            predicted protein [Populus trichocarpa]
          Length = 433

 Score =  630 bits (1626), Expect = e-178
 Identities = 301/424 (70%), Positives = 351/424 (82%)
 Frame = +3

Query: 153  KQVQVRFITKLKSPLKIPSTSIAIPSKSTRLDLSTIVNDFIKSGNNSHWERLPFDFLIDG 332
            ++VQVRFITKLK P K+P+TSIAIP+  TRL LSTIVN  +K+G++  WE  PFDFLIDG
Sbjct: 10   RRVQVRFITKLKPPFKVPNTSIAIPANLTRLGLSTIVNSLLKAGDDE-WESQPFDFLIDG 68

Query: 333  ELVRMELEHFLLAKGISAEKILEIEYIKAAVPRKQEDSCLHDDWVSAVNGSNPRFILTGS 512
            ELVR+ LE FLLAKGISAEK+LEIEY +A V +K+++  LHDDWVSAV+GS PRFILTG 
Sbjct: 69   ELVRLPLEQFLLAKGISAEKVLEIEYTRAVVLQKEDEPSLHDDWVSAVDGSCPRFILTGC 128

Query: 513  YDSFARVWKSDGLCTHVLEGHKDAITSVSLVNSKGVESDTSLHIATASKDRTVRLWKFDA 692
            YD+  RVWK+ G CTH+LEGH  AITSVS+VNS+G +S T   +ATASKD T+RLWKFD 
Sbjct: 129  YDNLGRVWKAAGECTHILEGHGGAITSVSVVNSEGTDSVT---VATASKDETLRLWKFDT 185

Query: 693  EEHYNQPRKITAHKVLKGHTAAVQSVVSHPSGDMVCSGSWDSTINLWRTNDSEAEGNLAS 872
            EEH +QP KI A K+L+GH A VQSV +  SG M+CSGSWD TINLWRTN+S+ E +L S
Sbjct: 186  EEHLDQPSKIRAFKILRGHNAPVQSVAAEASGSMICSGSWDCTINLWRTNESDTESDLVS 245

Query: 873  IKKRKVGTDAKESQLEGEAVSTFVGHTQCVSSVVWPEREDIYSASWDHSIRRWDIETGKD 1052
            IKKRKV   A ESQLEG A+ST VGHTQCVSSV WPE   IYSASWDHS+RRWD+E GKD
Sbjct: 246  IKKRKVKNKAGESQLEGGALSTLVGHTQCVSSVYWPEPNTIYSASWDHSVRRWDVEMGKD 305

Query: 1053 TLNVFTGKVLNCVDVGGEGSSLIAAGGSDPVLRIWDPRRPGNVAPTFQFSSHSSWIMACK 1232
              N+F GK L+C+ VGGEGS+LIAAGGSDP+LR+WDPR+PG  AP +QFSSH+SWI ACK
Sbjct: 306  LSNIFCGKALHCLHVGGEGSALIAAGGSDPILRVWDPRKPGTSAPIYQFSSHNSWISACK 365

Query: 1233 WHKKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSHKDKVLCADWWKDDCVISGGADSELC 1412
            WH +S FHLLSASYDGK+MLWDLRTAWPLA+IDSH+DKVLCADWWK D VISGG DS+L 
Sbjct: 366  WHSESLFHLLSASYDGKLMLWDLRTAWPLAIIDSHEDKVLCADWWKGDSVISGGVDSKLR 425

Query: 1413 ISSG 1424
            ISSG
Sbjct: 426  ISSG 429


>emb|CAN70824.1| hypothetical protein VITISV_042345 [Vitis vinifera]
          Length = 427

 Score =  625 bits (1612), Expect = e-176
 Identities = 302/424 (71%), Positives = 344/424 (81%)
 Frame = +3

Query: 150  TKQVQVRFITKLKSPLKIPSTSIAIPSKSTRLDLSTIVNDFIKSGNNSHWERLPFDFLID 329
            +++VQVRF TKL+SP K P TSIAIPS  TR+ LS IVN+ +KSGN   W+  PFDFLID
Sbjct: 11   SRRVQVRFTTKLQSPFKTPPTSIAIPSNLTRMGLSAIVNNLLKSGNPD-WKPEPFDFLID 69

Query: 330  GELVRMELEHFLLAKGISAEKILEIEYIKAAVPRKQEDSCLHDDWVSAVNGSNPRFILTG 509
            GELVRM LE FL+AKGISAEKILEIEYIKA  PRKQE+  LHDDWVSAV+GSNP FILTG
Sbjct: 70   GELVRMSLEQFLIAKGISAEKILEIEYIKAVAPRKQEEPSLHDDWVSAVDGSNPGFILTG 129

Query: 510  SYDSFARVWKSDGLCTHVLEGHKDAITSVSLVNSKGVESDTSLHIATASKDRTVRLWKFD 689
             YD   R+WK+ G CTH+LEGH DAITSV  ++ K V        ATASKDRT+RLWK  
Sbjct: 130  CYDGLGRLWKAAGSCTHILEGHNDAITSVKFIDPKVV--------ATASKDRTLRLWKGS 181

Query: 690  AEEHYNQPRKITAHKVLKGHTAAVQSVVSHPSGDMVCSGSWDSTINLWRTNDSEAEGNLA 869
            A      P KI A K+L GH A+VQSV   P+G+MVCSGSWD TINLWRT++ + EG+L 
Sbjct: 182  AMIF---PLKIRAFKILHGHNASVQSVAVQPTGNMVCSGSWDCTINLWRTDEFDVEGDLV 238

Query: 870  SIKKRKVGTDAKESQLEGEAVSTFVGHTQCVSSVVWPEREDIYSASWDHSIRRWDIETGK 1049
            S+KKRKV  +A+ESQ EGEAVST VGHTQCVSSV+WP+ E IYSASWDHS+RRWD+ETGK
Sbjct: 239  SVKKRKVNNEAEESQAEGEAVSTIVGHTQCVSSVIWPQHETIYSASWDHSVRRWDVETGK 298

Query: 1050 DTLNVFTGKVLNCVDVGGEGSSLIAAGGSDPVLRIWDPRRPGNVAPTFQFSSHSSWIMAC 1229
            D+ N+F GK LNC+DVGGE S+LIAAGGSD  LRIWDPR+PG + P FQFSSH+SWI AC
Sbjct: 299  DSWNLFCGKALNCLDVGGESSALIAAGGSDTTLRIWDPRKPGTLTPVFQFSSHTSWISAC 358

Query: 1230 KWHKKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSHKDKVLCADWWKDDCVISGGADSEL 1409
            KWH KSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH +KVLCADWWK D V+SGGADS+L
Sbjct: 359  KWHNKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSHNNKVLCADWWKGDSVVSGGADSKL 418

Query: 1410 CISS 1421
            CISS
Sbjct: 419  CISS 422


>ref|XP_003543948.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Glycine max]
          Length = 435

 Score =  614 bits (1584), Expect = e-173
 Identities = 288/423 (68%), Positives = 346/423 (81%)
 Frame = +3

Query: 153  KQVQVRFITKLKSPLKIPSTSIAIPSKSTRLDLSTIVNDFIKSGNNSHWERLPFDFLIDG 332
            ++VQVRF+TKL  P K+P+T+IAIP+   RL LS++VN  ++S +  H    PFDFLIDG
Sbjct: 13   RRVQVRFVTKLGEPYKVPTTAIAIPADLARLGLSSLVNALLQSNDADHQPE-PFDFLIDG 71

Query: 333  ELVRMELEHFLLAKGISAEKILEIEYIKAAVPRKQEDSCLHDDWVSAVNGSNPRFILTGS 512
            E VRM LE FLLAKGISAE+ILEIEY +A  PRK+ED  LHDDWVSAV+GS+ RF LTG 
Sbjct: 72   EFVRMSLEQFLLAKGISAERILEIEYARAVAPRKEEDPSLHDDWVSAVDGSSSRFFLTGC 131

Query: 513  YDSFARVWKSDGLCTHVLEGHKDAITSVSLVNSKGVESDTSLHIATASKDRTVRLWKFDA 692
            YD   RVWK  GLCTH+LEGH DAITS+S++N KG E+ T   +ATASKDRT+RLWK +A
Sbjct: 132  YDGLGRVWKGAGLCTHILEGHSDAITSISIINPKGEETVT---VATASKDRTLRLWKLNA 188

Query: 693  EEHYNQPRKITAHKVLKGHTAAVQSVVSHPSGDMVCSGSWDSTINLWRTNDSEAEGNLAS 872
             +H N P ++ A+K+L+GH ++VQ V    +G+MVCS SWD TINLW+TND  AE +L S
Sbjct: 189  GDHVNNPMRVRAYKILRGHKSSVQCVAVQTAGEMVCSASWDCTINLWQTNDFNAEDDLVS 248

Query: 873  IKKRKVGTDAKESQLEGEAVSTFVGHTQCVSSVVWPEREDIYSASWDHSIRRWDIETGKD 1052
             KKRK+G   +ESQLEGEA +T VGHTQCVS+VVWP+RE IYSASWDHSIR+WD+ETGK+
Sbjct: 249  -KKRKIGAQVEESQLEGEAFTTLVGHTQCVSAVVWPQRESIYSASWDHSIRKWDVETGKN 307

Query: 1053 TLNVFTGKVLNCVDVGGEGSSLIAAGGSDPVLRIWDPRRPGNVAPTFQFSSHSSWIMACK 1232
              ++F GKVLNC+D+GGEGS+LIAAGGSDPV+RIWDPR+PG  AP FQFSSH SW+ ACK
Sbjct: 308  LTDLFCGKVLNCLDIGGEGSTLIAAGGSDPVIRIWDPRKPGTSAPVFQFSSHMSWVSACK 367

Query: 1233 WHKKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSHKDKVLCADWWKDDCVISGGADSELC 1412
            WH +SWFHLLSASYDGKVMLWDLRTAWPL+VI+SH DKVL ADWWK + VISGGADS+LC
Sbjct: 368  WHDQSWFHLLSASYDGKVMLWDLRTAWPLSVIESHSDKVLSADWWKSNSVISGGADSKLC 427

Query: 1413 ISS 1421
            ISS
Sbjct: 428  ISS 430


>ref|XP_003516844.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Glycine max]
          Length = 435

 Score =  613 bits (1581), Expect = e-173
 Identities = 288/423 (68%), Positives = 345/423 (81%)
 Frame = +3

Query: 153  KQVQVRFITKLKSPLKIPSTSIAIPSKSTRLDLSTIVNDFIKSGNNSHWERLPFDFLIDG 332
            ++VQVRF+TKL  P K+P+T+IAIP+   R  LS++VN  ++S +  H    PFDFLIDG
Sbjct: 13   RRVQVRFVTKLGEPYKVPTTAIAIPADLARFGLSSLVNALLQSNDADHQPE-PFDFLIDG 71

Query: 333  ELVRMELEHFLLAKGISAEKILEIEYIKAAVPRKQEDSCLHDDWVSAVNGSNPRFILTGS 512
            E VRM LE FLLAKGISAE+ILEIEY +A  PRK+ED  LHDDWVSAV+GS+ RF LTG 
Sbjct: 72   EFVRMSLEQFLLAKGISAERILEIEYARAVAPRKEEDPSLHDDWVSAVDGSSSRFFLTGC 131

Query: 513  YDSFARVWKSDGLCTHVLEGHKDAITSVSLVNSKGVESDTSLHIATASKDRTVRLWKFDA 692
            YD   RVWK  GLCTH+LEGH DAITSVS++N KG E+ T   +ATASKDRT+RLWK +A
Sbjct: 132  YDGLGRVWKGAGLCTHILEGHSDAITSVSIINPKGEETVT---VATASKDRTLRLWKLNA 188

Query: 693  EEHYNQPRKITAHKVLKGHTAAVQSVVSHPSGDMVCSGSWDSTINLWRTNDSEAEGNLAS 872
             +H N P ++ A+K+L+GH ++VQ V    +G+MVCS SWD TINLW+TND  AE +L S
Sbjct: 189  GDHVNNPMRVRAYKILRGHKSSVQCVAVQTAGEMVCSASWDCTINLWQTNDFNAEDDLVS 248

Query: 873  IKKRKVGTDAKESQLEGEAVSTFVGHTQCVSSVVWPEREDIYSASWDHSIRRWDIETGKD 1052
             KKRK+G   +ESQLEGEA +T VGHTQCVS+VVWP+RE IYSASWDHSIR+WD+ETGK+
Sbjct: 249  -KKRKIGAQVEESQLEGEAFTTLVGHTQCVSAVVWPQRESIYSASWDHSIRKWDVETGKN 307

Query: 1053 TLNVFTGKVLNCVDVGGEGSSLIAAGGSDPVLRIWDPRRPGNVAPTFQFSSHSSWIMACK 1232
              ++F GKVLNC+D+GGEGS+LIAAGGSDPV+RIWDPR+PG  AP FQFSSH SW+ ACK
Sbjct: 308  LTDLFCGKVLNCLDIGGEGSTLIAAGGSDPVIRIWDPRKPGTSAPVFQFSSHMSWVSACK 367

Query: 1233 WHKKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSHKDKVLCADWWKDDCVISGGADSELC 1412
            WH +SWFHLLSASYDGKVMLWDLRTAWPL+VI+SH DKVL ADWWK + VISGGADS+LC
Sbjct: 368  WHDQSWFHLLSASYDGKVMLWDLRTAWPLSVIESHSDKVLSADWWKSNSVISGGADSKLC 427

Query: 1413 ISS 1421
            ISS
Sbjct: 428  ISS 430