BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007678
         (1017 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotei...   326   6e-87
ref|XP_003554737.1| PREDICTED: U1 small nuclear ribonucleoprotei...   325   1e-86
gb|ACU24174.1| unknown [Glycine max]                                  323   4e-86
gb|ACJ84781.1| unknown [Medicago truncatula]                          321   2e-85
ref|NP_001235453.1| uncharacterized protein LOC100500002 [Glycin...   321   2e-85

>ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Vitis vinifera]
          Length = 245

 Score =  326 bits (835), Expect = 6e-87
 Identities = 173/238 (72%), Positives = 190/238 (79%), Gaps = 6/238 (2%)
 Frame = +1

Query: 91  DVPPNQTIYINNLNEKVKLDGLKKSLIAVFSQFGKIVDVLAFKTLKHHGQAWVVFDDATS 270
           ++ PN TIYINNLNEK+KL+ LKKSL AVFSQFGKI++VLAFKTLKH GQAWVVF++ +S
Sbjct: 9   EISPNMTIYINNLNEKIKLEELKKSLFAVFSQFGKIMEVLAFKTLKHKGQAWVVFEEVSS 68

Query: 271 ASNALKQMQGFPFYDKPMRIQYAKTKSDVIAKADNTFVPXXXXXXXXXXXXXXXXXQQHD 450
           A+NAL+QMQGFPFYDKPMRIQYAKTKSDVIAKAD TFVP                 +QHD
Sbjct: 69  ATNALRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVP-RERRRRHDDRAGRKRREQHD 127

Query: 451 ANQAGMGLNP-YAGAYGATP---MLPYPGVAKSA-QEAPALPNNILFVQNLPHETNPMML 615
           ANQAG+G+NP Y GAYGA P    +PY G AKSA  EAPA PNNILF+QNLPHE  PMML
Sbjct: 128 ANQAGVGVNPAYGGAYGAAPPLSQIPYLGGAKSAVPEAPAPPNNILFIQNLPHEATPMML 187

Query: 616 QMRFTQYEGFKEVRMVEAKPGIAFVEYGNEMQSTQAMHGLQGYMINAQ-PMQITYAKK 786
           QM F QY GFKEVRMVEAKPGIAFVEYG+EMQST AM GLQG  IN Q PM ITYAKK
Sbjct: 188 QMFFCQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGLKINQQNPMLITYAKK 245


>ref|XP_003554737.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Glycine max]
          Length = 241

 Score =  325 bits (833), Expect = 1e-86
 Identities = 170/237 (71%), Positives = 189/237 (79%), Gaps = 3/237 (1%)
 Frame = +1

Query: 85  TDDVPPNQTIYINNLNEKVKLDGLKKSLIAVFSQFGKIVDVLAFKTLKHHGQAWVVFDDA 264
           T ++P N TIYINNLNEK+K+D LKKSL AVF+QFGKI++VLAFKTLKH GQAWVVF+DA
Sbjct: 7   TPEIPQNNTIYINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDA 66

Query: 265 TSASNALKQMQGFPFYDKPMRIQYAKTKSDVIAKADNTFVPXXXXXXXXXXXXXXXXXQQ 444
           +SASNAL+QMQGFPFYDKPMRIQYAKTKSD+IAKAD TFVP                  Q
Sbjct: 67  SSASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVP--REKRKRHDEKAKKRKDQ 124

Query: 445 HDANQAGMGLNP-YAGAYGATPMLPYPGVAKS-AQEAPALPNNILFVQNLPHETNPMMLQ 618
           HD+N AGMGLNP YAGAYGA P + YPG AKS   EAPA PNNILF+QNLP+++ PMMLQ
Sbjct: 125 HDSNLAGMGLNPAYAGAYGAAPAIAYPGGAKSMVPEAPAPPNNILFIQNLPNDSTPMMLQ 184

Query: 619 MRFTQYEGFKEVRMVEAKPGIAFVEYGNEMQSTQAMHGLQGYMINAQ-PMQITYAKK 786
           M F QY GFKEVRMVE KPGIAFVEYG+EMQST AM  LQG+ I  Q PM ITYAKK
Sbjct: 185 MLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQGFKITPQNPMLITYAKK 241


>gb|ACU24174.1| unknown [Glycine max]
          Length = 241

 Score =  323 bits (828), Expect = 4e-86
 Identities = 169/237 (71%), Positives = 188/237 (79%), Gaps = 3/237 (1%)
 Frame = +1

Query: 85  TDDVPPNQTIYINNLNEKVKLDGLKKSLIAVFSQFGKIVDVLAFKTLKHHGQAWVVFDDA 264
           T ++P N  IYINNLNEK+K+D LKKSL AVF+QFGKI++VLAFKTLKH GQAWVVF+DA
Sbjct: 7   TPEIPQNNAIYINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDA 66

Query: 265 TSASNALKQMQGFPFYDKPMRIQYAKTKSDVIAKADNTFVPXXXXXXXXXXXXXXXXXQQ 444
           +SASNAL+QMQGFPFYDKPMRIQYAKTKSD+IAKAD TFVP                  Q
Sbjct: 67  SSASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVP--REKRKRHDEKAKKRKDQ 124

Query: 445 HDANQAGMGLNP-YAGAYGATPMLPYPGVAKS-AQEAPALPNNILFVQNLPHETNPMMLQ 618
           HD+N AGMGLNP YAGAYGA P + YPG AKS   EAPA PNNILF+QNLP+++ PMMLQ
Sbjct: 125 HDSNLAGMGLNPAYAGAYGAAPAIAYPGGAKSMVPEAPAPPNNILFIQNLPNDSTPMMLQ 184

Query: 619 MRFTQYEGFKEVRMVEAKPGIAFVEYGNEMQSTQAMHGLQGYMINAQ-PMQITYAKK 786
           M F QY GFKEVRMVE KPGIAFVEYG+EMQST AM  LQG+ I  Q PM ITYAKK
Sbjct: 185 MLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQGFKITPQNPMLITYAKK 241


>gb|ACJ84781.1| unknown [Medicago truncatula]
          Length = 245

 Score =  321 bits (823), Expect = 2e-85
 Identities = 173/236 (73%), Positives = 187/236 (79%), Gaps = 6/236 (2%)
 Frame = +1

Query: 97  PPNQTIYINNLNEKVKLDGLKKSLIAVFSQFGKIVDVLAFKTLKHHGQAWVVFDDATSAS 276
           P N TIYINNLNEK+K+D LKKSL AVFSQFGKI++VLAFKTLKH GQAWV+F+D TSAS
Sbjct: 11  PQNMTIYINNLNEKIKIDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVTSAS 70

Query: 277 NALKQMQGFPFYDKPMRIQYAKTKSDVIAKADNTFVPXXXXXXXXXXXXXXXXXQQHDAN 456
           NAL+QMQGFPFYDKPMRIQYA+TKSDVIAKA+ TFVP                  Q+DAN
Sbjct: 71  NALRQMQGFPFYDKPMRIQYARTKSDVIAKAEGTFVP-REKRKRHDDKAGKKRKDQNDAN 129

Query: 457 QAGMGLNP-YAGAYGATPML---PYPGVAKS-AQEAPALPNNILFVQNLPHETNPMMLQM 621
            AG GLNP YAGAYGATP L   PYPG AKS   EAPA PNNILF+QNLP+ET PMMLQM
Sbjct: 130 LAGTGLNPAYAGAYGATPALSQIPYPGGAKSLLPEAPAPPNNILFIQNLPNETTPMMLQM 189

Query: 622 RFTQYEGFKEVRMVEAKPGIAFVEYGNEMQSTQAMHGLQGYMINAQ-PMQITYAKK 786
            F QY GFKEVRMVEAKPGIAFVEYG+EMQST AM  LQG+ I  Q PM ITYAKK
Sbjct: 190 LFLQYPGFKEVRMVEAKPGIAFVEYGDEMQSTMAMQALQGFKIAPQNPMLITYAKK 245


>ref|NP_001235453.1| uncharacterized protein LOC100500002 [Glycine max]
           gi|255628437|gb|ACU14563.1| unknown [Glycine max]
          Length = 241

 Score =  321 bits (822), Expect = 2e-85
 Identities = 169/237 (71%), Positives = 188/237 (79%), Gaps = 3/237 (1%)
 Frame = +1

Query: 85  TDDVPPNQTIYINNLNEKVKLDGLKKSLIAVFSQFGKIVDVLAFKTLKHHGQAWVVFDDA 264
           T ++P + TIYINNLNEK+K+D LKKSL AVF+QFGKI++VLAFKTLKH GQAWVVF+DA
Sbjct: 7   TPEIPQSNTIYINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDA 66

Query: 265 TSASNALKQMQGFPFYDKPMRIQYAKTKSDVIAKADNTFVPXXXXXXXXXXXXXXXXXQQ 444
           +SASNAL+QMQGFPFYDKPMRIQYAKTKSD+IAKAD TFVP                  Q
Sbjct: 67  SSASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVP--REKRKRHDDKAKKRKDQ 124

Query: 445 HDANQAGMGLNP-YAGAYGATPMLPYPGVAKS-AQEAPALPNNILFVQNLPHETNPMMLQ 618
           HDAN AGMGLNP YAGAYGA P + YPG AKS   EAPA PNNILF+QNLP+++ PMMLQ
Sbjct: 125 HDANLAGMGLNPAYAGAYGAAPAIAYPGGAKSMVPEAPAPPNNILFIQNLPNDSTPMMLQ 184

Query: 619 MRFTQYEGFKEVRMVEAKPGIAFVEYGNEMQSTQAMHGLQGYMINAQ-PMQITYAKK 786
           M F QY GFKEVRMVE KPGIAFVEYG+EMQST AM  LQ + I  Q PM ITYAKK
Sbjct: 185 MLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQCFKITPQNPMLITYAKK 241