BLASTX nr result

ID: Coptis21_contig00007670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007670
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330157.1| predicted protein [Populus trichocarpa] gi|1...   148   8e-34
gb|AAO27366.1| rapid alkalinization factor 1 precursor [Populus ...   148   1e-33
emb|CBI26076.3| unnamed protein product [Vitis vinifera]              147   2e-33
ref|XP_002321018.1| predicted protein [Populus trichocarpa] gi|2...   147   2e-33
ref|XP_002512426.1| RALFL33, putative [Ricinus communis] gi|2235...   146   3e-33

>ref|XP_002330157.1| predicted protein [Populus trichocarpa] gi|118484425|gb|ABK94089.1|
           unknown [Populus trichocarpa]
           gi|222871613|gb|EEF08744.1| predicted protein [Populus
           trichocarpa]
          Length = 120

 Score =  148 bits (374), Expect = 8e-34
 Identities = 72/120 (60%), Positives = 89/120 (74%), Gaps = 5/120 (4%)
 Frame = -2

Query: 618 MATTRSYSML-VMIFITTILLVISTIDASGNHQLSWIPTR----CTGSIAECLSEENDEF 454
           MA   S+ ++   I I   + + ST+  SG+H L WIP      C GSIAEC++E+ +EF
Sbjct: 1   MAKRSSWFLISATILILMAMGLSSTVQGSGDHHLGWIPATRSSVCKGSIAECMAEDGEEF 60

Query: 453 GMDSEISRRILAVTRYISYGALNRNRVPCNRRGASYYNCKSGAQANPYSRGCSAITRCRS 274
            MD+EI+RRILA T+Y+SYGAL RN VPC+RRGASYYNC+ GAQANPYSRGCS ITRCRS
Sbjct: 61  EMDTEINRRILATTKYVSYGALQRNNVPCSRRGASYYNCQRGAQANPYSRGCSRITRCRS 120


>gb|AAO27366.1| rapid alkalinization factor 1 precursor [Populus trichocarpa x
           Populus deltoides]
          Length = 120

 Score =  148 bits (373), Expect = 1e-33
 Identities = 69/107 (64%), Positives = 83/107 (77%), Gaps = 4/107 (3%)
 Frame = -2

Query: 582 IFITTILLVISTIDASGNHQLSWIPTR----CTGSIAECLSEENDEFGMDSEISRRILAV 415
           I I   + + ST+  SG+H L WIP      C GSIAEC++E+ +EF MD+EI+RRILA 
Sbjct: 14  ILILMAMGLSSTVQGSGDHHLGWIPATRSSVCKGSIAECMAEDGEEFEMDTEINRRILAT 73

Query: 414 TRYISYGALNRNRVPCNRRGASYYNCKSGAQANPYSRGCSAITRCRS 274
           T+Y+SYGAL RN VPC+RRGASYYNC+ GAQANPYSRGCS ITRCRS
Sbjct: 74  TKYVSYGALQRNNVPCSRRGASYYNCQRGAQANPYSRGCSRITRCRS 120


>emb|CBI26076.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score =  147 bits (371), Expect = 2e-33
 Identities = 75/124 (60%), Positives = 92/124 (74%), Gaps = 5/124 (4%)
 Frame = -2

Query: 633 RKKISMATTRSYSMLVMIFITTILLVISTIDASGNH---QLSWIPTR--CTGSIAECLSE 469
           R++  M  + ++ ++  I    ++L  S +D SG+H   QL WIP R  C GSIAECL+ 
Sbjct: 30  RREAKMGNSSAFVLICAIMAVHMVLTSSAVDFSGDHLQFQLGWIPARSACQGSIAECLAG 89

Query: 468 ENDEFGMDSEISRRILAVTRYISYGALNRNRVPCNRRGASYYNCKSGAQANPYSRGCSAI 289
           E  EF MDSEI+RRILA  RYISYGAL+RN VPC+RRGASYYNC+ GAQANPY+RGCSAI
Sbjct: 90  E--EFEMDSEINRRILASKRYISYGALSRNSVPCSRRGASYYNCRPGAQANPYTRGCSAI 147

Query: 288 TRCR 277
           TRCR
Sbjct: 148 TRCR 151


>ref|XP_002321018.1| predicted protein [Populus trichocarpa] gi|222861791|gb|EEE99333.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score =  147 bits (370), Expect = 2e-33
 Identities = 67/107 (62%), Positives = 88/107 (82%), Gaps = 3/107 (2%)
 Frame = -2

Query: 585 MIFITTILLVISTIDASGNHQLSWIPTR---CTGSIAECLSEENDEFGMDSEISRRILAV 415
           ++ ++ +++  ST+DAS +H L+W+PTR   C G++AEC+   NDEF MDSEI+RRILA 
Sbjct: 1   VLLLSALIISSSTVDASEDHNLNWVPTRARGCQGTVAECMG--NDEFEMDSEINRRILAT 58

Query: 414 TRYISYGALNRNRVPCNRRGASYYNCKSGAQANPYSRGCSAITRCRS 274
           + YISY AL +N VPC++RGASYYNCK+GA+ANPYSRGCSAITRCRS
Sbjct: 59  SNYISYDALGKNNVPCSQRGASYYNCKTGAEANPYSRGCSAITRCRS 105


>ref|XP_002512426.1| RALFL33, putative [Ricinus communis] gi|223548387|gb|EEF49878.1|
           RALFL33, putative [Ricinus communis]
          Length = 121

 Score =  146 bits (369), Expect = 3e-33
 Identities = 73/117 (62%), Positives = 83/117 (70%), Gaps = 5/117 (4%)
 Frame = -2

Query: 609 TRSYSMLVMIFITTILLVISTIDASGNHQLSWIPT-----RCTGSIAECLSEENDEFGMD 445
           T  + M    FI  ++     + ASG+H L WIPT      C GSIAECL+   +EF MD
Sbjct: 6   TSCFLMCATTFILILIAASPAVQASGDH-LGWIPTIRSSSTCKGSIAECLASNGEEFEMD 64

Query: 444 SEISRRILAVTRYISYGALNRNRVPCNRRGASYYNCKSGAQANPYSRGCSAITRCRS 274
           SE SRRILA T+YISYGAL RN VPC+RRGASYYNC+ GAQANPYSRGCS ITRCRS
Sbjct: 65  SETSRRILATTKYISYGALQRNSVPCSRRGASYYNCQPGAQANPYSRGCSTITRCRS 121


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