BLASTX nr result

ID: Coptis21_contig00007657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00007657
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535994.1| PREDICTED: protein translocase subunit SecA,...   412   e-113
ref|XP_003518476.1| PREDICTED: protein translocase subunit SecA,...   408   e-112
ref|XP_004135530.1| PREDICTED: protein translocase subunit SECA1...   402   e-110
ref|NP_192089.1| preprotein translocase subunit secA [Arabidopsi...   399   e-109
ref|XP_002320935.1| predicted protein [Populus trichocarpa] gi|2...   399   e-109

>ref|XP_003535994.1| PREDICTED: protein translocase subunit SecA, chloroplastic-like
           [Glycine max]
          Length = 1014

 Score =  412 bits (1060), Expect = e-113
 Identities = 201/234 (85%), Positives = 227/234 (97%)
 Frame = +1

Query: 1   LGGLLGGIFKGNDTGEGTRQKYAGTVSLINGMEAEMSSLSDLELRERTSVLKERARKGES 180
           LGGLLGGIFKG DTGE TRQ+YA TV++ING+E E+S+LSD ELR+RT  L+ERA++G+S
Sbjct: 65  LGGLLGGIFKGADTGEATRQQYAATVNIINGLEPEISALSDSELRDRTFALRERAQQGQS 124

Query: 181 LDSLLPEAFAVVREGSKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLN 360
           LDSLLPEAFAVVREGSKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVA+LPAYLN
Sbjct: 125 LDSLLPEAFAVVREGSKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAVLPAYLN 184

Query: 361 ALSGRGVHVVTVNDYLARRDCEWVGQVPRFLGLQVGLIQQNMSSEQRRESYSCDITYVTN 540
           ALSG+GVHVVTVNDYLARRDCEWVGQVPRFLGL+VGLIQQNM+S+QR+E+YSCDITYVTN
Sbjct: 185 ALSGKGVHVVTVNDYLARRDCEWVGQVPRFLGLKVGLIQQNMTSQQRKENYSCDITYVTN 244

Query: 541 SELGFDYLRDNLATNVDELVVRGFSFCVIDEVDSILIDEARTPLIISGPADKPS 702
           SELGFDYLRDNLAT+V++LV+RGF++C+IDEVDSILIDEARTPLIISGPA+KPS
Sbjct: 245 SELGFDYLRDNLATSVEDLVIRGFNYCIIDEVDSILIDEARTPLIISGPAEKPS 298


>ref|XP_003518476.1| PREDICTED: protein translocase subunit SecA, chloroplastic-like
           [Glycine max]
          Length = 1012

 Score =  408 bits (1049), Expect = e-112
 Identities = 199/234 (85%), Positives = 225/234 (96%)
 Frame = +1

Query: 1   LGGLLGGIFKGNDTGEGTRQKYAGTVSLINGMEAEMSSLSDLELRERTSVLKERARKGES 180
           LGGLLGGIFKG DTGE T+Q+YA TV++ING+E E+S+LSD ELR+RT  L+ERA+ G+S
Sbjct: 62  LGGLLGGIFKGADTGEATKQQYAATVNIINGLEPEISALSDSELRDRTFALRERAQHGQS 121

Query: 181 LDSLLPEAFAVVREGSKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLN 360
           LDSLLPEAFAVVRE SKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVA+LPAYLN
Sbjct: 122 LDSLLPEAFAVVREASKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAVLPAYLN 181

Query: 361 ALSGRGVHVVTVNDYLARRDCEWVGQVPRFLGLQVGLIQQNMSSEQRRESYSCDITYVTN 540
           ALSG+GVHVVTVNDYLARRDCEWVGQVPRFLGL+VGLIQQNM+S+QR+E+YSCDITYVTN
Sbjct: 182 ALSGKGVHVVTVNDYLARRDCEWVGQVPRFLGLKVGLIQQNMTSQQRKENYSCDITYVTN 241

Query: 541 SELGFDYLRDNLATNVDELVVRGFSFCVIDEVDSILIDEARTPLIISGPADKPS 702
           SELGFDYLRDNLAT+V++LV+RGF++C+IDEVDSILIDEARTPLIISGPA+KPS
Sbjct: 242 SELGFDYLRDNLATSVEDLVIRGFNYCIIDEVDSILIDEARTPLIISGPAEKPS 295


>ref|XP_004135530.1| PREDICTED: protein translocase subunit SECA1, chloroplastic-like
           [Cucumis sativus]
          Length = 1025

 Score =  402 bits (1034), Expect = e-110
 Identities = 199/234 (85%), Positives = 222/234 (94%)
 Frame = +1

Query: 1   LGGLLGGIFKGNDTGEGTRQKYAGTVSLINGMEAEMSSLSDLELRERTSVLKERARKGES 180
           LGG LGGIF+G DTGE TRQ+YA TV++ING EA+MS+LSD +LR++TS+LKERA+ GE 
Sbjct: 71  LGGFLGGIFRGTDTGESTRQQYASTVAVINGFEAQMSALSDSQLRDKTSMLKERAQSGEP 130

Query: 181 LDSLLPEAFAVVREGSKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLN 360
           LDS+LPEAFAVVRE SKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLN
Sbjct: 131 LDSILPEAFAVVREASKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLN 190

Query: 361 ALSGRGVHVVTVNDYLARRDCEWVGQVPRFLGLQVGLIQQNMSSEQRRESYSCDITYVTN 540
           AL+G+GVHVVTVNDYLARRDCEWVGQVPRFLGL+VGLIQQNM+SE+RRE+Y  DITYVTN
Sbjct: 191 ALTGKGVHVVTVNDYLARRDCEWVGQVPRFLGLKVGLIQQNMTSEERRENYLSDITYVTN 250

Query: 541 SELGFDYLRDNLATNVDELVVRGFSFCVIDEVDSILIDEARTPLIISGPADKPS 702
           SELGFDYLRDNLAT+V+ELV+R FS+CVIDEVDSILIDEARTPLIISGPA+KPS
Sbjct: 251 SELGFDYLRDNLATSVEELVLRDFSYCVIDEVDSILIDEARTPLIISGPAEKPS 304


>ref|NP_192089.1| preprotein translocase subunit secA [Arabidopsis thaliana]
           gi|322510072|sp|Q9SYI0.2|SECA1_ARATH RecName:
           Full=Protein translocase subunit SECA1, chloroplastic;
           Short=AtcpSecA; AltName: Full=Protein ALBINO OR GLASSY
           YELLOW 1; Flags: Precursor gi|332656678|gb|AEE82078.1|
           preprotein translocase subunit secA [Arabidopsis
           thaliana]
          Length = 1022

 Score =  399 bits (1026), Expect = e-109
 Identities = 198/234 (84%), Positives = 219/234 (93%)
 Frame = +1

Query: 1   LGGLLGGIFKGNDTGEGTRQKYAGTVSLINGMEAEMSSLSDLELRERTSVLKERARKGES 180
           LGGLL GIFKG+D GE TRQ+YA  V+ +N +E E+S+LSD ELRERT  LK+RA+KGES
Sbjct: 74  LGGLLSGIFKGSDNGESTRQQYASIVASVNRLETEISALSDSELRERTDALKQRAQKGES 133

Query: 181 LDSLLPEAFAVVREGSKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLN 360
           +DSLLPEAFAVVRE SKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLN
Sbjct: 134 MDSLLPEAFAVVREASKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLN 193

Query: 361 ALSGRGVHVVTVNDYLARRDCEWVGQVPRFLGLQVGLIQQNMSSEQRRESYSCDITYVTN 540
           ALSG+GVHVVTVNDYLARRDCEWVGQVPRFLGL+VGLIQQNM+ EQR+E+Y CDITYVTN
Sbjct: 194 ALSGKGVHVVTVNDYLARRDCEWVGQVPRFLGLKVGLIQQNMTPEQRKENYLCDITYVTN 253

Query: 541 SELGFDYLRDNLATNVDELVVRGFSFCVIDEVDSILIDEARTPLIISGPADKPS 702
           SELGFDYLRDNLAT+V+ELV+R F++CVIDEVDSILIDEARTPLIISGPA+KPS
Sbjct: 254 SELGFDYLRDNLATSVEELVLRDFNYCVIDEVDSILIDEARTPLIISGPAEKPS 307


>ref|XP_002320935.1| predicted protein [Populus trichocarpa] gi|222861708|gb|EEE99250.1|
           predicted protein [Populus trichocarpa]
          Length = 963

 Score =  399 bits (1025), Expect = e-109
 Identities = 201/237 (84%), Positives = 222/237 (93%), Gaps = 3/237 (1%)
 Frame = +1

Query: 1   LGGLLGGIFKGNDTGEGTRQKYAGTVSLINGMEAEMSSLSDLELRERTSVLKERARKGES 180
           LGGLLGGIFKG DTGE TR++YA TVSLIN +EAE+S+LSD +LR++T+ LKERA+ GES
Sbjct: 7   LGGLLGGIFKGTDTGESTRKQYAPTVSLINQLEAEISALSDSQLRDKTAALKERAQLGES 66

Query: 181 LDSLLPEAFAVVREGSKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLN 360
           LDSLLPEAFAVVRE SKRV+GLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLN
Sbjct: 67  LDSLLPEAFAVVREASKRVIGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLN 126

Query: 361 ALSGRGVHVVTVNDYLARRDCEWVGQVPRFLGLQVGLIQQNMSSEQRRESYSCDITYVTN 540
           ALSG+GVH+VTVNDYLARRDCEWVGQVPRFLGL+VGLIQQNM+SEQRRE+Y CDITYVTN
Sbjct: 127 ALSGKGVHIVTVNDYLARRDCEWVGQVPRFLGLKVGLIQQNMTSEQRRENYMCDITYVTN 186

Query: 541 SELGFDYLRDNLA---TNVDELVVRGFSFCVIDEVDSILIDEARTPLIISGPADKPS 702
           SELGFDYLRDNLA     V+ELV+R F++CVIDEVDSILIDEARTPLIISGPA+KPS
Sbjct: 187 SELGFDYLRDNLAMEIQTVEELVLRDFNYCVIDEVDSILIDEARTPLIISGPAEKPS 243


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