BLASTX nr result
ID: Coptis21_contig00007657
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00007657 (704 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003535994.1| PREDICTED: protein translocase subunit SecA,... 412 e-113 ref|XP_003518476.1| PREDICTED: protein translocase subunit SecA,... 408 e-112 ref|XP_004135530.1| PREDICTED: protein translocase subunit SECA1... 402 e-110 ref|NP_192089.1| preprotein translocase subunit secA [Arabidopsi... 399 e-109 ref|XP_002320935.1| predicted protein [Populus trichocarpa] gi|2... 399 e-109 >ref|XP_003535994.1| PREDICTED: protein translocase subunit SecA, chloroplastic-like [Glycine max] Length = 1014 Score = 412 bits (1060), Expect = e-113 Identities = 201/234 (85%), Positives = 227/234 (97%) Frame = +1 Query: 1 LGGLLGGIFKGNDTGEGTRQKYAGTVSLINGMEAEMSSLSDLELRERTSVLKERARKGES 180 LGGLLGGIFKG DTGE TRQ+YA TV++ING+E E+S+LSD ELR+RT L+ERA++G+S Sbjct: 65 LGGLLGGIFKGADTGEATRQQYAATVNIINGLEPEISALSDSELRDRTFALRERAQQGQS 124 Query: 181 LDSLLPEAFAVVREGSKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLN 360 LDSLLPEAFAVVREGSKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVA+LPAYLN Sbjct: 125 LDSLLPEAFAVVREGSKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAVLPAYLN 184 Query: 361 ALSGRGVHVVTVNDYLARRDCEWVGQVPRFLGLQVGLIQQNMSSEQRRESYSCDITYVTN 540 ALSG+GVHVVTVNDYLARRDCEWVGQVPRFLGL+VGLIQQNM+S+QR+E+YSCDITYVTN Sbjct: 185 ALSGKGVHVVTVNDYLARRDCEWVGQVPRFLGLKVGLIQQNMTSQQRKENYSCDITYVTN 244 Query: 541 SELGFDYLRDNLATNVDELVVRGFSFCVIDEVDSILIDEARTPLIISGPADKPS 702 SELGFDYLRDNLAT+V++LV+RGF++C+IDEVDSILIDEARTPLIISGPA+KPS Sbjct: 245 SELGFDYLRDNLATSVEDLVIRGFNYCIIDEVDSILIDEARTPLIISGPAEKPS 298 >ref|XP_003518476.1| PREDICTED: protein translocase subunit SecA, chloroplastic-like [Glycine max] Length = 1012 Score = 408 bits (1049), Expect = e-112 Identities = 199/234 (85%), Positives = 225/234 (96%) Frame = +1 Query: 1 LGGLLGGIFKGNDTGEGTRQKYAGTVSLINGMEAEMSSLSDLELRERTSVLKERARKGES 180 LGGLLGGIFKG DTGE T+Q+YA TV++ING+E E+S+LSD ELR+RT L+ERA+ G+S Sbjct: 62 LGGLLGGIFKGADTGEATKQQYAATVNIINGLEPEISALSDSELRDRTFALRERAQHGQS 121 Query: 181 LDSLLPEAFAVVREGSKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLN 360 LDSLLPEAFAVVRE SKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVA+LPAYLN Sbjct: 122 LDSLLPEAFAVVREASKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAVLPAYLN 181 Query: 361 ALSGRGVHVVTVNDYLARRDCEWVGQVPRFLGLQVGLIQQNMSSEQRRESYSCDITYVTN 540 ALSG+GVHVVTVNDYLARRDCEWVGQVPRFLGL+VGLIQQNM+S+QR+E+YSCDITYVTN Sbjct: 182 ALSGKGVHVVTVNDYLARRDCEWVGQVPRFLGLKVGLIQQNMTSQQRKENYSCDITYVTN 241 Query: 541 SELGFDYLRDNLATNVDELVVRGFSFCVIDEVDSILIDEARTPLIISGPADKPS 702 SELGFDYLRDNLAT+V++LV+RGF++C+IDEVDSILIDEARTPLIISGPA+KPS Sbjct: 242 SELGFDYLRDNLATSVEDLVIRGFNYCIIDEVDSILIDEARTPLIISGPAEKPS 295 >ref|XP_004135530.1| PREDICTED: protein translocase subunit SECA1, chloroplastic-like [Cucumis sativus] Length = 1025 Score = 402 bits (1034), Expect = e-110 Identities = 199/234 (85%), Positives = 222/234 (94%) Frame = +1 Query: 1 LGGLLGGIFKGNDTGEGTRQKYAGTVSLINGMEAEMSSLSDLELRERTSVLKERARKGES 180 LGG LGGIF+G DTGE TRQ+YA TV++ING EA+MS+LSD +LR++TS+LKERA+ GE Sbjct: 71 LGGFLGGIFRGTDTGESTRQQYASTVAVINGFEAQMSALSDSQLRDKTSMLKERAQSGEP 130 Query: 181 LDSLLPEAFAVVREGSKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLN 360 LDS+LPEAFAVVRE SKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLN Sbjct: 131 LDSILPEAFAVVREASKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLN 190 Query: 361 ALSGRGVHVVTVNDYLARRDCEWVGQVPRFLGLQVGLIQQNMSSEQRRESYSCDITYVTN 540 AL+G+GVHVVTVNDYLARRDCEWVGQVPRFLGL+VGLIQQNM+SE+RRE+Y DITYVTN Sbjct: 191 ALTGKGVHVVTVNDYLARRDCEWVGQVPRFLGLKVGLIQQNMTSEERRENYLSDITYVTN 250 Query: 541 SELGFDYLRDNLATNVDELVVRGFSFCVIDEVDSILIDEARTPLIISGPADKPS 702 SELGFDYLRDNLAT+V+ELV+R FS+CVIDEVDSILIDEARTPLIISGPA+KPS Sbjct: 251 SELGFDYLRDNLATSVEELVLRDFSYCVIDEVDSILIDEARTPLIISGPAEKPS 304 >ref|NP_192089.1| preprotein translocase subunit secA [Arabidopsis thaliana] gi|322510072|sp|Q9SYI0.2|SECA1_ARATH RecName: Full=Protein translocase subunit SECA1, chloroplastic; Short=AtcpSecA; AltName: Full=Protein ALBINO OR GLASSY YELLOW 1; Flags: Precursor gi|332656678|gb|AEE82078.1| preprotein translocase subunit secA [Arabidopsis thaliana] Length = 1022 Score = 399 bits (1026), Expect = e-109 Identities = 198/234 (84%), Positives = 219/234 (93%) Frame = +1 Query: 1 LGGLLGGIFKGNDTGEGTRQKYAGTVSLINGMEAEMSSLSDLELRERTSVLKERARKGES 180 LGGLL GIFKG+D GE TRQ+YA V+ +N +E E+S+LSD ELRERT LK+RA+KGES Sbjct: 74 LGGLLSGIFKGSDNGESTRQQYASIVASVNRLETEISALSDSELRERTDALKQRAQKGES 133 Query: 181 LDSLLPEAFAVVREGSKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLN 360 +DSLLPEAFAVVRE SKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLN Sbjct: 134 MDSLLPEAFAVVREASKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLN 193 Query: 361 ALSGRGVHVVTVNDYLARRDCEWVGQVPRFLGLQVGLIQQNMSSEQRRESYSCDITYVTN 540 ALSG+GVHVVTVNDYLARRDCEWVGQVPRFLGL+VGLIQQNM+ EQR+E+Y CDITYVTN Sbjct: 194 ALSGKGVHVVTVNDYLARRDCEWVGQVPRFLGLKVGLIQQNMTPEQRKENYLCDITYVTN 253 Query: 541 SELGFDYLRDNLATNVDELVVRGFSFCVIDEVDSILIDEARTPLIISGPADKPS 702 SELGFDYLRDNLAT+V+ELV+R F++CVIDEVDSILIDEARTPLIISGPA+KPS Sbjct: 254 SELGFDYLRDNLATSVEELVLRDFNYCVIDEVDSILIDEARTPLIISGPAEKPS 307 >ref|XP_002320935.1| predicted protein [Populus trichocarpa] gi|222861708|gb|EEE99250.1| predicted protein [Populus trichocarpa] Length = 963 Score = 399 bits (1025), Expect = e-109 Identities = 201/237 (84%), Positives = 222/237 (93%), Gaps = 3/237 (1%) Frame = +1 Query: 1 LGGLLGGIFKGNDTGEGTRQKYAGTVSLINGMEAEMSSLSDLELRERTSVLKERARKGES 180 LGGLLGGIFKG DTGE TR++YA TVSLIN +EAE+S+LSD +LR++T+ LKERA+ GES Sbjct: 7 LGGLLGGIFKGTDTGESTRKQYAPTVSLINQLEAEISALSDSQLRDKTAALKERAQLGES 66 Query: 181 LDSLLPEAFAVVREGSKRVLGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLN 360 LDSLLPEAFAVVRE SKRV+GLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLN Sbjct: 67 LDSLLPEAFAVVREASKRVIGLRPFDVQLIGGMVLHKGEIAEMRTGEGKTLVAILPAYLN 126 Query: 361 ALSGRGVHVVTVNDYLARRDCEWVGQVPRFLGLQVGLIQQNMSSEQRRESYSCDITYVTN 540 ALSG+GVH+VTVNDYLARRDCEWVGQVPRFLGL+VGLIQQNM+SEQRRE+Y CDITYVTN Sbjct: 127 ALSGKGVHIVTVNDYLARRDCEWVGQVPRFLGLKVGLIQQNMTSEQRRENYMCDITYVTN 186 Query: 541 SELGFDYLRDNLA---TNVDELVVRGFSFCVIDEVDSILIDEARTPLIISGPADKPS 702 SELGFDYLRDNLA V+ELV+R F++CVIDEVDSILIDEARTPLIISGPA+KPS Sbjct: 187 SELGFDYLRDNLAMEIQTVEELVLRDFNYCVIDEVDSILIDEARTPLIISGPAEKPS 243